RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Smarcal1Q8BJL0 910 aa15.85■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Neu4Q8BZL1 478 aa15.85■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Etv3Q8R4Z4 513 aa15.85■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Ces1fQ91WU0 561 aa15.85■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Cse1lQ9ERK4 971 aaKnown RBP15.85■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Ercc4Q9QZD4 917 aa15.85■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Arid2E9Q7E2 1828 aa15.85■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Plekhg4A0A1L1SU27 1217 aa15.84■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Zfp358E9Q8M1 571 aa15.84■□□□□ 0.13
Ercc1-201ENSMUST00000003645 CcnoP0C242 352 aa15.84■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Senp1P59110 640 aa15.84■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Sppl2bQ3TD49 578 aa15.84■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Myl6Q60605 151 aaKnown RBP15.84■□□□□ 0.13
Ercc1-201ENSMUST00000003645 RetsatQ64FW2 609 aa15.84■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Anp32cQ64G17 123 aa15.84■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Daam2Q80U19 1115 aa15.84■□□□□ 0.13
Ercc1-201ENSMUST00000003645 MogsQ80UM7 834 aaKnown RBP15.84■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Lrrc8aQ80WG5 810 aa15.84■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Kctd6Q8BNL5 237 aa15.84■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Rint1Q8BZ36 792 aa15.84■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Lonp1Q8CGK3 949 aaKnown RBP15.84■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Ca12Q8CI85 354 aa15.84■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Znf131Q8K3J5 619 aa15.84■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Atp1a1Q8VDN2 1023 aaKnown RBP15.84■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Pcdha9Q91Y11 979 aa15.84■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Plagl2Q925T4 496 aa15.84■□□□□ 0.13
Ercc1-201ENSMUST00000003645 GhdcQ99J23 532 aa15.84■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Fuca1Q99LJ1 452 aa15.84■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Mageb16Q9CWV4 363 aa15.84■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Slamf8Q9D3G2 278 aa15.84■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Mzb1Q9D8I1 188 aa15.84■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Rnf103Q9R1W3 683 aa15.84■□□□□ 0.13
Ercc1-201ENSMUST00000003645 Pex10B1AUE5 324 aa15.83■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Cyp2b23E9Q593 491 aa15.83■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Tpp1O89023 562 aa15.83■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Ephb4P54761 987 aa15.83■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Tpm1P58771 284 aa15.83■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Hvcn1Q3U2S8 269 aa15.83■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Bcar1Q61140 874 aa15.83■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Vps72Q62481 368 aa15.83■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Cyp3a16Q64481 504 aa15.83■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Lin9Q8C735 542 aa15.83■□□□□ 0.12
Ercc1-201ENSMUST00000003645 PdxkQ8K183 312 aa15.83■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Olfr1499Q8VG65 314 aa15.83■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Olfr30Q8VGD8 315 aa15.83■□□□□ 0.12
Ercc1-201ENSMUST00000003645 CarfQ8VHI4 689 aa15.83■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Setd3Q91WC0 594 aa15.83■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Gpr37l1Q99JG2 481 aa15.83■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Ddx50Q99MJ9 734 aaKnown RBP15.83■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Tubgcp4Q9D4F8 667 aa15.83■□□□□ 0.12
Ercc1-201ENSMUST00000003645 PirQ9D711 290 aa15.83■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Ush1cQ9ES64 910 aa15.83■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Dnajc7Q9QYI3 494 aa15.83■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Nr1h3Q9Z0Y9 445 aa15.83■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Cntnap4Q99P47 1310 aa15.82■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Slc4a11A2AJN7 862 aa15.82■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Hnrnph3D3Z3N4 346 aaKnown RBP15.82■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Gm6583E9Q8Z1 469 aa15.82■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Tpm3P21107 285 aaKnown RBP15.82■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Nub1P54729 614 aa15.82■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Cracr2aQ3UP38 310 aa15.82■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Usp17laQ61068 526 aa15.82■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Ovgp1Q62010 721 aa15.82■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Ccpg1Q640L3 753 aa15.82■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Mpp4Q6P7F1 635 aa15.82■□□□□ 0.12
Ercc1-201ENSMUST00000003645 GnsQ8BFR4 544 aa15.82■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Trim65Q8BFW4 522 aa15.82■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Nmrk1Q91W63 195 aa15.82■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Clp1Q99LI9 425 aa15.82■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Gtpbp4Q99ME9 634 aaKnown RBP15.82■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Oxct1Q9D0K2 520 aaKnown RBP15.82■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Htra3Q9D236 459 aa15.82■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Rnf138rt1Q9D9M9 248 aa15.82■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Atp1a4Q9WV27 1032 aa15.82■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Aoc3O70423 765 aa15.81■□□□□ 0.12
Ercc1-201ENSMUST00000003645 GmnnO88513 206 aa15.81■□□□□ 0.12
Ercc1-201ENSMUST00000003645 P04214 136 aa15.81■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Slc12a1P55014 1095 aa15.81■□□□□ 0.12
Ercc1-201ENSMUST00000003645 ArvcfP98203 962 aa15.81■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Rplp2P99027 115 aaKnown RBP15.81■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Entpd7Q3TCT4 606 aa15.81■□□□□ 0.12
Ercc1-201ENSMUST00000003645 ItgaeQ60677 1167 aa15.81■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Mxd4Q60948 209 aa15.81■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Cd300lfQ6SJQ7 337 aa15.81■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Kcnf1Q7TSH7 493 aa15.81■□□□□ 0.12
Ercc1-201ENSMUST00000003645 RragaQ80X95 313 aa15.81■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Acad11Q80XL6 779 aa15.81■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Iqcb1Q8BP00 598 aa15.81■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Agap1Q8BXK8 857 aaKnown RBP15.81■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Kat5Q8CHK4 513 aa15.81■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Bicdl2Q8CHW5 507 aa15.81■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Lrrc66Q8K0B3 872 aa15.81■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Tcp11l2Q8K1H7 517 aa15.81■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Olfr532Q8VGT4 309 aa15.81■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Tlr3Q99MB1 905 aa15.81■□□□□ 0.12
Ercc1-201ENSMUST00000003645 1700020D05RikQ99PB1 294 aa15.81■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Trpc3Q9QZC1 836 aa15.81■□□□□ 0.12
Ercc1-201ENSMUST00000003645 ThadaA8C756 1938 aa15.81■□□□□ 0.12
Ercc1-201ENSMUST00000003645 Casp8ap2Q9WUF3 1962 aa15.8■□□□□ 0.12
Ercc1-201ENSMUST00000003645 2210011C24RikA0A087WQ89 206 aa15.8■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 43 ms