Protein–RNA interactions for Protein: Q99P47

Cntnap4, Contactin-associated protein-like 4, mousemouse

Predictions only

Length 1,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap4Q99P47 Gm25239-201ENSMUST00000174915 86 ntBASIC41.18■■■■■ 4.18
Cntnap4Q99P47 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.08■■■■□ 3.69
Cntnap4Q99P47 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
Cntnap4Q99P47 Gm15042-201ENSMUST00000120212 883 ntBASIC36.08■■■■□ 3.37
Cntnap4Q99P47 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
Cntnap4Q99P47 Gm24109-201ENSMUST00000175489 103 ntBASIC35.71■■■■□ 3.31
Cntnap4Q99P47 Gm15045-201ENSMUST00000117359 883 ntBASIC35.32■■■■□ 3.25
Cntnap4Q99P47 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Cntnap4Q99P47 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Cntnap4Q99P47 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.77■■■■□ 3.16
Cntnap4Q99P47 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.53■■■■□ 3.12
Cntnap4Q99P47 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
Cntnap4Q99P47 Gm23366-201ENSMUST00000175022 89 ntBASIC34.38■■■■□ 3.09
Cntnap4Q99P47 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
Cntnap4Q99P47 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
Cntnap4Q99P47 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
Cntnap4Q99P47 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.48■■■□□ 2.95
Cntnap4Q99P47 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.35■■■□□ 2.93
Cntnap4Q99P47 Psd-208ENSMUST00000224556 2034 ntBASIC33.3■■■□□ 2.92
Cntnap4Q99P47 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.23■■■□□ 2.91
Cntnap4Q99P47 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.22■■■□□ 2.91
Cntnap4Q99P47 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Cntnap4Q99P47 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Cntnap4Q99P47 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.05■■■□□ 2.88
Cntnap4Q99P47 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.99■■■□□ 2.87
Cntnap4Q99P47 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.95■■■□□ 2.87
Cntnap4Q99P47 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.86
Cntnap4Q99P47 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Cntnap4Q99P47 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Cntnap4Q99P47 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.86■■■□□ 2.85
Cntnap4Q99P47 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
Cntnap4Q99P47 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.79■■■□□ 2.84
Cntnap4Q99P47 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Cntnap4Q99P47 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Cntnap4Q99P47 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.55■■■□□ 2.8
Cntnap4Q99P47 Gm25238-201ENSMUST00000174914 89 ntBASIC32.5■■■□□ 2.79
Cntnap4Q99P47 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.42■■■□□ 2.78
Cntnap4Q99P47 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.17■■■□□ 2.74
Cntnap4Q99P47 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Cntnap4Q99P47 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Cntnap4Q99P47 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Cntnap4Q99P47 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Cntnap4Q99P47 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
Cntnap4Q99P47 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.87■■■□□ 2.69
Cntnap4Q99P47 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Cntnap4Q99P47 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Cntnap4Q99P47 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.74■■■□□ 2.67
Cntnap4Q99P47 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Cntnap4Q99P47 Gm27325-201ENSMUST00000175467 74 ntBASIC31.62■■■□□ 2.65
Cntnap4Q99P47 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Cntnap4Q99P47 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.58■■■□□ 2.65
Cntnap4Q99P47 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Cntnap4Q99P47 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.48■■■□□ 2.63
Cntnap4Q99P47 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
Cntnap4Q99P47 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Cntnap4Q99P47 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.36■■■□□ 2.61
Cntnap4Q99P47 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.3■■■□□ 2.6
Cntnap4Q99P47 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Cntnap4Q99P47 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.19■■■□□ 2.58
Cntnap4Q99P47 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.18■■■□□ 2.58
Cntnap4Q99P47 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Cntnap4Q99P47 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Cntnap4Q99P47 Gm25262-201ENSMUST00000174934 133 ntBASIC31.03■■■□□ 2.56
Cntnap4Q99P47 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Cntnap4Q99P47 Rab21-202ENSMUST00000218831 843 ntBASIC30.99■■■□□ 2.55
Cntnap4Q99P47 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Cntnap4Q99P47 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Cntnap4Q99P47 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.93■■■□□ 2.54
Cntnap4Q99P47 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Cntnap4Q99P47 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.87■■■□□ 2.53
Cntnap4Q99P47 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
Cntnap4Q99P47 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Cntnap4Q99P47 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Cntnap4Q99P47 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
Cntnap4Q99P47 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.72■■■□□ 2.51
Cntnap4Q99P47 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Cntnap4Q99P47 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Cntnap4Q99P47 Gm26115-201ENSMUST00000175605 87 ntBASIC30.7■■■□□ 2.5
Cntnap4Q99P47 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.7■■■□□ 2.5
Cntnap4Q99P47 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Cntnap4Q99P47 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Cntnap4Q99P47 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.63■■■□□ 2.49
Cntnap4Q99P47 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
Cntnap4Q99P47 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.61■■■□□ 2.49
Cntnap4Q99P47 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Cntnap4Q99P47 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Cntnap4Q99P47 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.57■■■□□ 2.48
Cntnap4Q99P47 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Cntnap4Q99P47 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.47
Cntnap4Q99P47 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
Cntnap4Q99P47 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
Cntnap4Q99P47 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Cntnap4Q99P47 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.39■■■□□ 2.46
Cntnap4Q99P47 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.38■■■□□ 2.45
Cntnap4Q99P47 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Cntnap4Q99P47 Gm8109-201ENSMUST00000194076 746 ntBASIC30.38■■■□□ 2.45
Cntnap4Q99P47 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.38■■■□□ 2.45
Cntnap4Q99P47 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Cntnap4Q99P47 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Cntnap4Q99P47 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms