RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR78, Length 87 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR78snR78 YGR026WP53217 278 aa1.66□□□□□ -2.14
snR78snR78 MDH3P32419 343 aaKnown RBP RIP-Chip data1.65□□□□□ -2.15not detected
snR78snR78 PHO88P38264 188 aaPredicted RBP1.65□□□□□ -2.15
snR78snR78 YHR022CP38763 256 aa1.65□□□□□ -2.15
snR78snR78 MRX5P47007 382 aa1.65□□□□□ -2.15
snR78snR78 LSB1P53281 241 aa1.65□□□□□ -2.15
snR78snR78 MAL13P53338 473 aa1.65□□□□□ -2.15
snR78snR78 MZM1Q03429 123 aaPredicted RBP1.65□□□□□ -2.15
snR78snR78 MEU1Q07938 337 aaKnown RBP RIP-Chip data1.65□□□□□ -2.15not detected
snR78snR78 AKR2Q12013 749 aa1.65□□□□□ -2.15
snR78snR78 MEK1P24719 497 aaPredicted RBP1.64□□□□□ -2.15
snR78snR78 YGL010WP25338 174 aa1.64□□□□□ -2.15
snR78snR78 YBR219CP38317 127 aa1.64□□□□□ -2.15
snR78snR78 YHR125WP38831 101 aa1.64□□□□□ -2.15
snR78snR78 GLE2P40066 365 aa1.64□□□□□ -2.15
snR78snR78 GCD14P46959 383 aaPredicted RBP1.64□□□□□ -2.15
snR78snR78 YGL185CP53100 379 aa1.64□□□□□ -2.15
snR78snR78 YMR279CQ03263 540 aa1.64□□□□□ -2.15
snR78snR78 YLR179CQ06252 201 aaKnown RBP1.64□□□□□ -2.15
snR78snR78 SME1Q12330 94 aaPredicted RBP1.64□□□□□ -2.15
snR78snR78 YGR219WP53307 113 aa1.61□□□□□ -2.15
snR78snR78 FPR1P20081 114 aaKnown RBP1.6□□□□□ -2.15
snR78snR78 OPI1P21957 404 aa1.6□□□□□ -2.15
snR78snR78 VMA11P32842 164 aa1.6□□□□□ -2.15
snR78snR78 YBR220CP38318 560 aa1.6□□□□□ -2.15
snR78snR78 YGL034CP53186 121 aa1.6□□□□□ -2.15
snR78snR78 DDI2P0CH63 225 aa1.59□□□□□ -2.15
snR78snR78 DDI3P0CH64 225 aa1.59□□□□□ -2.15
snR78snR78 CTR2P38865 189 aa1.59□□□□□ -2.15
snR78snR78 YER189WP40104 122 aa1.59□□□□□ -2.15
snR78snR78 FMP33P46998 180 aa1.59□□□□□ -2.15
snR78snR78 SPP2Q02521 185 aa1.59□□□□□ -2.15
snR78snR78 YLR462WO13556 202 aa1.58□□□□□ -2.16
snR78snR78 YEL075CP39972 122 aa1.58□□□□□ -2.16
snR78snR78 CSI2Q08054 341 aa1.58□□□□□ -2.16
snR78snR78 FMP16Q12497 93 aa1.58□□□□□ -2.16
snR78snR78 YPL119C-AQ3E751 87 aa1.58□□□□□ -2.16
snR78snR78 COX5AP00424 153 aa1.57□□□□□ -2.16
snR78snR78 MET16P18408 261 aaPredicted RBP1.57□□□□□ -2.16
snR78snR78 ERV15P38312 142 aa1.57□□□□□ -2.16
snR78snR78 AVT2P39981 480 aa1.57□□□□□ -2.16
snR78snR78 YJR012CP47087 207 aa1.57□□□□□ -2.16
snR78snR78 BUD25P85052 153 aa1.57□□□□□ -2.16
snR78snR78 YDR124WQ04608 324 aa1.57□□□□□ -2.16
snR78snR78 KRR1P25586 316 aaPredicted RBP1.56□□□□□ -2.16
snR78snR78 OAC1P32332 324 aa1.56□□□□□ -2.16
snR78snR78 YKE4P40544 346 aa1.56□□□□□ -2.16
snR78snR78 SWI1P09547 1314 aa1.56□□□□□ -2.16
snR78snR78 MSA2P36157 363 aa1.55□□□□□ -2.16
snR78snR78 DSN1P40568 576 aa1.54□□□□□ -2.16
snR78snR78 NUP57P48837 541 aa1.54□□□□□ -2.16
snR78snR78 YNR062CP53748 327 aa1.54□□□□□ -2.16
snR78snR78 HIS1P00498 297 aaKnown RBP1.53□□□□□ -2.16
snR78snR78 RPL2AP0CX45 254 aaKnown RBP1.53□□□□□ -2.16
snR78snR78 RPL2BP0CX46 254 aaKnown RBP1.53□□□□□ -2.16
snR78snR78 FAR8Q05040 523 aa1.53□□□□□ -2.16
snR78snR78 GMC2Q06201 188 aa1.53□□□□□ -2.16
snR78snR78 USB1Q12208 290 aaKnown RBP1.53□□□□□ -2.16
snR78snR78 MRPL23Q12487 163 aaPredicted RBP1.53□□□□□ -2.16
snR78snR78 RPL9AP05738 191 aaKnown RBP1.52□□□□□ -2.17
snR78snR78 DDI1P40087 428 aa1.52□□□□□ -2.17
snR78snR78 COA1P40452 197 aa1.52□□□□□ -2.17
snR78snR78 RPL9BP51401 191 aaKnown RBP1.52□□□□□ -2.17
snR78snR78 GOT1Q03554 138 aa1.52□□□□□ -2.17
snR78snR78 YPR147CQ06522 304 aaKnown RBP1.52□□□□□ -2.17
snR78snR78 YLR413WQ06689 675 aa1.52□□□□□ -2.17
snR78snR78 ERG24P32462 438 aaKnown RBP1.51□□□□□ -2.17
snR78snR78 YKL070WP36087 169 aa1.51□□□□□ -2.17
snR78snR78 MRPL40P36534 297 aa1.51□□□□□ -2.17
snR78snR78 PEX18P38855 283 aa1.51□□□□□ -2.17
snR78snR78 NEJ1Q06148 342 aa1.51□□□□□ -2.17
snR78snR78 AGE2P40529 298 aa1.5□□□□□ -2.17
snR78snR78 YGL159WP53110 370 aa1.5□□□□□ -2.17
snR78snR78 MRH4P53166 561 aa1.5□□□□□ -2.17
snR78snR78 YLR162WQ06235 118 aa1.5□□□□□ -2.17
snR78snR78 SNF8Q12483 233 aa1.5□□□□□ -2.17
snR78snR78 YIL002W-AQ3E7Z5 69 aa1.5□□□□□ -2.17
snR78snR78 VPS3P23643 1011 aa1.49□□□□□ -2.17
snR78snR78 FZO1P38297 855 aa1.49□□□□□ -2.17
snR78snR78 YJR079WP47126 109 aa1.49□□□□□ -2.17
snR78snR78 YLR030WQ07967 263 aa1.49□□□□□ -2.17
snR78snR78 SYC1Q08553 188 aaPredicted RBP1.49□□□□□ -2.17
snR78snR78 FLO9P39712 1322 aa1.48□□□□□ -2.17
snR78snR78 MSW1P04803 379 aa1.48□□□□□ -2.17
snR78snR78 QRI5P32344 111 aa1.48□□□□□ -2.17
snR78snR78 RPL13BP40212 199 aaKnown RBP1.48□□□□□ -2.17
snR78snR78 SML1Q04964 104 aa1.48□□□□□ -2.17
snR78snR78 ATG17Q06410 417 aa1.48□□□□□ -2.17
snR78snR78 RPL13AQ12690 199 aaPredicted RBP1.48□□□□□ -2.17
snR78snR78 SNZ3P43545 298 aa1.47□□□□□ -2.17
snR78snR78 GTR2P53290 341 aa1.47□□□□□ -2.17
snR78snR78 OST6Q03723 332 aa1.47□□□□□ -2.17
snR78snR78 FIS1P40515 155 aa1.46□□□□□ -2.18
snR78snR78 ERV29P53337 310 aa1.46□□□□□ -2.18
snR78snR78 SIR4P11978 1358 aa1.46□□□□□ -2.18
snR78snR78 CYR1P08678 2026 aaKnown RBP1.45□□□□□ -2.18
snR78snR78 SSK22P25390 1331 aaPredicted RBP1.45□□□□□ -2.18
snR78snR78 YHR180WP38868 163 aa1.45□□□□□ -2.18
snR78snR78 YKR104WP0CE69 306 aa1.44□□□□□ -2.18
snR78snR78 UPS2P35200 230 aa1.44□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 67.2 ms