RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC8	YPR055W	YHL049C	P38722	271 aa		0.42	□□□□□ -2.34
SEC8	YPR055W	FCY21	P40039	528 aa		0.42	□□□□□ -2.34
SEC8	YPR055W	YJR141W	P47172	347 aa	Predicted RBP	0.42	□□□□□ -2.34
SEC8	YPR055W	NBP1	P52919	319 aa	Predicted RBP	0.42	□□□□□ -2.34
SEC8	YPR055W	SDC1	Q03323	175 aa		0.42	□□□□□ -2.34
SEC8	YPR055W	VBA1	Q04301	562 aa		0.42	□□□□□ -2.34
SEC8	YPR055W	YMR114C	Q04471	368 aa	Known RBP	0.42	□□□□□ -2.34
SEC8	YPR055W	TY4B-H	P0C2J7	1802 aa		0.42	□□□□□ -2.34
SEC8	YPR055W	DPM1	P14020	267 aa	Known RBP	0.42	□□□□□ -2.34
SEC8	YPR055W	CAM1	P29547	415 aa	Known RBP	0.42	□□□□□ -2.34
SEC8	YPR055W	MAL32	P38158	584 aa		0.42	□□□□□ -2.34
SEC8	YPR055W	IBA57	P47158	497 aa		0.42	□□□□□ -2.34
SEC8	YPR055W	GTO1	P48239	356 aa		0.42	□□□□□ -2.34
SEC8	YPR055W	KEL2	P50090	882 aa		0.42	□□□□□ -2.34
SEC8	YPR055W	MAL12	P53341	584 aa		0.42	□□□□□ -2.34
SEC8	YPR055W	MYO5	Q04439	1219 aa	Known RBP	0.42	□□□□□ -2.34
SEC8	YPR055W	TAF9	Q05027	157 aa		0.42	□□□□□ -2.34
SEC8	YPR055W	SFH1	Q06168	426 aa		0.42	□□□□□ -2.34
SEC8	YPR055W	GEP5	Q12393	293 aa		0.42	□□□□□ -2.34
SEC8	YPR055W	NOT5	Q12514	560 aa	Predicted RBP	0.42	□□□□□ -2.34
SEC8	YPR055W	YPL247C	Q12523	523 aa		0.42	□□□□□ -2.34
SEC8	YPR055W	ISD11	Q6Q560	94 aa		0.42	□□□□□ -2.34
SEC8	YPR055W	RPL26A	P05743	127 aa	Known RBP	0.41	□□□□□ -2.34
SEC8	YPR055W	DPB2	P24482	689 aa	Predicted RBP	0.41	□□□□□ -2.34
SEC8	YPR055W	CLB6	P32943	380 aa		0.41	□□□□□ -2.34
SEC8	YPR055W	YFR054C	P43622	192 aa		0.41	□□□□□ -2.34
SEC8	YPR055W	RPL26B	P53221	127 aa	Known RBP	0.41	□□□□□ -2.34
SEC8	YPR055W	CGI121	Q03705	181 aa	Known RBP	0.41	□□□□□ -2.34
SEC8	YPR055W	GPN3	Q06543	272 aa		0.41	□□□□□ -2.34
SEC8	YPR055W	BER1	Q06688	274 aa	Known RBP	0.41	□□□□□ -2.34
SEC8	YPR055W	COS2	P0CX12	379 aa		0.41	□□□□□ -2.34
SEC8	YPR055W	COS3	P0CX13	379 aa		0.41	□□□□□ -2.34
SEC8	YPR055W	MEK1	P24719	497 aa	Predicted RBP	0.41	□□□□□ -2.34
SEC8	YPR055W	SPO19	Q03029	223 aa		0.41	□□□□□ -2.34
SEC8	YPR055W	FAS2	P19097	1887 aa	Known RBP	0.41	□□□□□ -2.34
SEC8	YPR055W	SWI1	P09547	1314 aa		0.41	□□□□□ -2.34
SEC8	YPR055W	RPC40	P07703	335 aa	Known RBP	0.41	□□□□□ -2.34
SEC8	YPR055W	FRS2	P15625	503 aa	Known RBP	0.41	□□□□□ -2.34
SEC8	YPR055W	SFC1	P33303	322 aa		0.41	□□□□□ -2.34
SEC8	YPR055W	GDH2	P33327	1092 aa	Known RBP	0.41	□□□□□ -2.34
SEC8	YPR055W	FMP33	P46998	180 aa		0.41	□□□□□ -2.34
SEC8	YPR055W	LOH1	P47055	219 aa		0.41	□□□□□ -2.34
SEC8	YPR055W	SPO77	Q06134	477 aa		0.41	□□□□□ -2.34
SEC8	YPR055W	FMP16	Q12497	93 aa		0.41	□□□□□ -2.34
SEC8	YPR055W	AI5_BETA	Q9ZZX0	354 aa		0.41	□□□□□ -2.34
SEC8	YPR055W	YAL064W-B	O13512	126 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	YHR032W-A	P0C5N6	59 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	SCO1	P23833	295 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	KRR1	P25586	316 aa	Predicted RBP	0.4	□□□□□ -2.35
SEC8	YPR055W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	0.4	□□□□□ -2.35	not detected
SEC8	YPR055W	TAD2	P47058	250 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	YGL034C	P53186	121 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	YNL260C	P53846	198 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	SWS2	P53937	143 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	ATC1	Q04005	294 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	DCR2	Q05924	578 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	BOP2	Q06150	570 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	SEC10	Q06245	871 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	YLR413W	Q06689	675 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	PER33	Q12144	273 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	TY3A-G	Q12173	290 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	PST1	Q12355	444 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	TY3A-I	Q99219	290 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	MDN1	Q12019	4910 aa	Known RBP	0.4	□□□□□ -2.35
SEC8	YPR055W	RNP1	P32385	249 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	DOA4	P32571	926 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	YKL070W	P36087	169 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	MRPL40	P36534	297 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	RRF1	P38771	230 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	NPT1	P39683	429 aa	Known RBP	0.4	□□□□□ -2.35
SEC8	YPR055W	MPP10	P47083	593 aa	Known RBP	0.4	□□□□□ -2.35
SEC8	YPR055W	MND1	P53102	219 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	COS6	P53344	381 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	SPP2	Q02521	185 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	PEX10	Q05568	337 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	CTR3	Q06686	241 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	SLD7	Q08457	257 aa		0.4	□□□□□ -2.35
SEC8	YPR055W	BMH1	P29311	267 aa	Known RBP	0.39	□□□□□ -2.35
SEC8	YPR055W	YOR062C	P36025	268 aa		0.39	□□□□□ -2.35
SEC8	YPR055W	COA1	P40452	197 aa		0.39	□□□□□ -2.35
SEC8	YPR055W	YJL118W	P47022	219 aa		0.39	□□□□□ -2.35
SEC8	YPR055W	NBP35	P52920	328 aa		0.39	□□□□□ -2.35
SEC8	YPR055W	LSB1	P53281	241 aa		0.39	□□□□□ -2.35
SEC8	YPR055W	OST6	Q03723	332 aa		0.39	□□□□□ -2.35
SEC8	YPR055W	ERV41	Q04651	352 aa		0.39	□□□□□ -2.35
SEC8	YPR055W	BBP1	Q12365	385 aa		0.39	□□□□□ -2.35
SEC8	YPR055W	RAS2	P01120	322 aa	Known RBP	0.39	□□□□□ -2.35
SEC8	YPR055W	DBP3	P20447	523 aa	Known RBP	0.39	□□□□□ -2.35
SEC8	YPR055W	PPH21	P23594	369 aa		0.39	□□□□□ -2.35
SEC8	YPR055W	YHR045W	P38775	560 aa		0.39	□□□□□ -2.35
SEC8	YPR055W	SNX4	P47057	423 aa		0.39	□□□□□ -2.35
SEC8	YPR055W	EBS1	Q03466	884 aa	Known RBP	0.39	□□□□□ -2.35
SEC8	YPR055W	YOS9	Q99220	542 aa		0.39	□□□□□ -2.35
SEC8	YPR055W	STH1	P32597	1359 aa		0.39	□□□□□ -2.35
SEC8	YPR055W	FLO1	P32768	1537 aa		0.39	□□□□□ -2.35
SEC8	YPR055W	HSM3	P38348	480 aa		0.39	□□□□□ -2.35
SEC8	YPR055W	YJL016W	P47072	561 aa		0.39	□□□□□ -2.35
SEC8	YPR055W	RSM10	Q03201	203 aa		0.39	□□□□□ -2.35
SEC8	YPR055W	MGR3	Q04472	501 aa		0.39	□□□□□ -2.35
SEC8	YPR055W	YOR283W	Q12040	230 aa	Known RBP	0.39	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 45 ms