RNA–Protein interactions for RNA: YOR313C

SPS4, Transcript of Protein whose expression is induced during sporulation, yeast

Gene SPS4, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPS4	YOR313C	DPB2	P24482	689 aa	Predicted RBP	3	□□□□□ -1.93
SPS4	YOR313C	PPA2	P28239	310 aa		3	□□□□□ -1.93
SPS4	YOR313C	CUE1	P38428	203 aa		3	□□□□□ -1.93
SPS4	YOR313C	RTR1	P40084	226 aa	Predicted RBP	3	□□□□□ -1.93
SPS4	YOR313C	YJR079W	P47126	109 aa		3	□□□□□ -1.93
SPS4	YOR313C	CTF19	Q02732	369 aa		3	□□□□□ -1.93
SPS4	YOR313C	SPG4	Q04438	115 aa		3	□□□□□ -1.93
SPS4	YOR313C	YDR124W	Q04608	324 aa		3	□□□□□ -1.93
SPS4	YOR313C	ESC1	Q03661	1658 aa	Known RBP	2.99	□□□□□ -1.93
SPS4	YOR313C	TDH2	P00358	332 aa	Known RBP	2.99	□□□□□ -1.93
SPS4	YOR313C	CAB3	P36076	571 aa		2.99	□□□□□ -1.93
SPS4	YOR313C	YHR127W	P38833	243 aa	Known RBP	2.99	□□□□□ -1.93
SPS4	YOR313C	YLR179C	Q06252	201 aa	Known RBP	2.99	□□□□□ -1.93
SPS4	YOR313C	COQ10	Q08058	207 aa		2.99	□□□□□ -1.93
SPS4	YOR313C	XRN1	P22147	1528 aa	Known RBP	2.98	□□□□□ -1.93
SPS4	YOR313C	YHB1	P39676	399 aa	Known RBP	2.98	□□□□□ -1.93
SPS4	YOR313C	HOC1	P47124	396 aa		2.98	□□□□□ -1.93
SPS4	YOR313C	JHD2	P47156	728 aa	Predicted RBP	2.98	□□□□□ -1.93
SPS4	YOR313C	YLR126C	Q12288	251 aa		2.98	□□□□□ -1.93
SPS4	YOR313C	SMT3	Q12306	101 aa	Known RBP	2.98	□□□□□ -1.93
SPS4	YOR313C	YCF1	P39109	1515 aa	Known RBP	2.98	□□□□□ -1.93
SPS4	YOR313C	RAD10	P06838	210 aa		2.97	□□□□□ -1.93
SPS4	YOR313C	RPL24B	P24000	155 aa	Known RBP	2.97	□□□□□ -1.93
SPS4	YOR313C	DRE2	P36152	348 aa		2.97	□□□□□ -1.93
SPS4	YOR313C	YBR096W	P38256	230 aa		2.97	□□□□□ -1.93
SPS4	YOR313C	GOS1	P38736	223 aa		2.97	□□□□□ -1.93
SPS4	YOR313C	YER188W	P40103	239 aa		2.97	□□□□□ -1.93
SPS4	YOR313C	YMR144W	P40214	342 aa	Known RBP	2.97	□□□□□ -1.93
SPS4	YOR313C	OST3	P48439	350 aa		2.97	□□□□□ -1.93
SPS4	YOR313C	YGL088W	P53151	121 aa		2.97	□□□□□ -1.93
SPS4	YOR313C	EMI1	Q04406	187 aa		2.97	□□□□□ -1.93
SPS4	YOR313C	YLR283W	Q05867	314 aa		2.97	□□□□□ -1.93
SPS4	YOR313C	SWI1	P09547	1314 aa		2.96	□□□□□ -1.93
SPS4	YOR313C	HIS3	P06633	220 aa		2.96	□□□□□ -1.94
SPS4	YOR313C	COS2	P0CX12	379 aa		2.96	□□□□□ -1.94
SPS4	YOR313C	COS3	P0CX13	379 aa		2.96	□□□□□ -1.94
SPS4	YOR313C	YGP1	P38616	354 aa	Known RBP	2.96	□□□□□ -1.94
SPS4	YOR313C	MRH4	P53166	561 aa		2.96	□□□□□ -1.94
SPS4	YOR313C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	2.96	□□□□□ -1.94	not detected
SPS4	YOR313C	TIM11	P81449	96 aa	Predicted RBP	2.96	□□□□□ -1.94
SPS4	YOR313C	SYC1	Q08553	188 aa	Predicted RBP	2.96	□□□□□ -1.94
SPS4	YOR313C	RHO1	P06780	209 aa	Known RBP	2.95	□□□□□ -1.94
SPS4	YOR313C	ZWF1	P11412	505 aa	Known RBP	2.95	□□□□□ -1.94
SPS4	YOR313C	NTG1	P31378	399 aa		2.95	□□□□□ -1.94
SPS4	YOR313C	MIC12	P38341	106 aa		2.95	□□□□□ -1.94
SPS4	YOR313C	COX15	P40086	486 aa		2.95	□□□□□ -1.94
SPS4	YOR313C	MDM34	P53083	459 aa		2.95	□□□□□ -1.94
SPS4	YOR313C	SYF2	P53277	215 aa	Predicted RBP	2.95	□□□□□ -1.94
SPS4	YOR313C	GEP5	Q12393	293 aa		2.95	□□□□□ -1.94
SPS4	YOR313C	NHP6B	P11633	99 aa	Known RBP	2.94	□□□□□ -1.94
SPS4	YOR313C	MIG1	P27705	504 aa		2.94	□□□□□ -1.94
SPS4	YOR313C	YKR032W	P36127	104 aa		2.94	□□□□□ -1.94
SPS4	YOR313C	SPO77	Q06134	477 aa		2.94	□□□□□ -1.94
SPS4	YOR313C	BBP1	Q12365	385 aa		2.94	□□□□□ -1.94
SPS4	YOR313C	YPL247C	Q12523	523 aa		2.94	□□□□□ -1.94
SPS4	YOR313C	THP2	O13539	261 aa	Known RBP	2.93	□□□□□ -1.94
SPS4	YOR313C	IPP1	P00817	287 aa	Known RBP	2.93	□□□□□ -1.94
SPS4	YOR313C	KRE1	P17260	313 aa		2.93	□□□□□ -1.94
SPS4	YOR313C	TOM40	P23644	387 aa	Known RBP	2.93	□□□□□ -1.94
SPS4	YOR313C	VMA6	P32366	345 aa	Known RBP	2.93	□□□□□ -1.94
SPS4	YOR313C	VPS21	P36017	210 aa	Known RBP	2.93	□□□□□ -1.94
SPS4	YOR313C	YER084W	P40057	128 aa		2.93	□□□□□ -1.94
SPS4	YOR313C	GON7	P46984	123 aa		2.93	□□□□□ -1.94
SPS4	YOR313C	YJL144W	P47009	104 aa		2.93	□□□□□ -1.94
SPS4	YOR313C	TAF2	P23255	1407 aa		2.93	□□□□□ -1.94
SPS4	YOR313C	SSK2	P53599	1579 aa		2.92	□□□□□ -1.94
SPS4	YOR313C	SEC22	P22214	214 aa		2.92	□□□□□ -1.94
SPS4	YOR313C	CDC10	P25342	322 aa	Known RBP	2.92	□□□□□ -1.94
SPS4	YOR313C	RSA4	P25382	515 aa	Known RBP	2.92	□□□□□ -1.94
SPS4	YOR313C	YCR102C	P25608	368 aa		2.92	□□□□□ -1.94
SPS4	YOR313C	MSS2	P40990	351 aa		2.92	□□□□□ -1.94
SPS4	YOR313C	PIR5	P46999	287 aa		2.92	□□□□□ -1.94
SPS4	YOR313C	YJR141W	P47172	347 aa	Predicted RBP	2.92	□□□□□ -1.94
SPS4	YOR313C	NSA1	P53136	463 aa	Predicted RBP	2.92	□□□□□ -1.94
SPS4	YOR313C	GRH1	Q04410	372 aa	Known RBP	2.92	□□□□□ -1.94
SPS4	YOR313C	YMR114C	Q04471	368 aa	Known RBP	2.92	□□□□□ -1.94
SPS4	YOR313C	DCR2	Q05924	578 aa		2.92	□□□□□ -1.94
SPS4	YOR313C	HEM25	Q07534	307 aa		2.92	□□□□□ -1.94
SPS4	YOR313C	YOR186W	Q08560	144 aa		2.92	□□□□□ -1.94
SPS4	YOR313C	FEX1	Q08913	375 aa		2.92	□□□□□ -1.94
SPS4	YOR313C	FEX2	Q08991	375 aa		2.92	□□□□□ -1.94
SPS4	YOR313C	EHD3	P28817	500 aa		2.91	□□□□□ -1.94
SPS4	YOR313C	SSO1	P32867	290 aa		2.91	□□□□□ -1.94
SPS4	YOR313C	GDH2	P33327	1092 aa	Known RBP	2.91	□□□□□ -1.94
SPS4	YOR313C	ECM13	P38195	257 aa		2.91	□□□□□ -1.94
SPS4	YOR313C	YER189W	P40104	122 aa		2.91	□□□□□ -1.94
SPS4	YOR313C	GCN20	P43535	752 aa	Known RBP	2.91	□□□□□ -1.94
SPS4	YOR313C	TRM9	P49957	279 aa		2.91	□□□□□ -1.94
SPS4	YOR313C	YGL034C	P53186	121 aa		2.91	□□□□□ -1.94
SPS4	YOR313C	CWC21	Q03375	135 aa	Known RBP	2.91	□□□□□ -1.94
SPS4	YOR313C	FCF1	Q05498	189 aa	Predicted RBP	2.91	□□□□□ -1.94
SPS4	YOR313C	SEI1	Q06058	285 aa		2.91	□□□□□ -1.94
SPS4	YOR313C	CCH1	P50077	2039 aa		2.91	□□□□□ -1.94
SPS4	YOR313C	SKI3	P17883	1432 aa	Known RBP	2.91	□□□□□ -1.94
SPS4	YOR313C	RPA190	P10964	1664 aa	Known RBP	2.91	□□□□□ -1.94
SPS4	YOR313C	YMR31	P19955	123 aa		2.9	□□□□□ -1.95
SPS4	YOR313C	RCN1	P36054	211 aa		2.9	□□□□□ -1.95
SPS4	YOR313C	OTU1	P43558	301 aa		2.9	□□□□□ -1.95
SPS4	YOR313C	SSU72	P53538	206 aa	Predicted RBP	2.9	□□□□□ -1.95
SPS4	YOR313C	RDS3	Q06835	107 aa	Predicted RBP	2.9	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms