RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C ERV25P54837 211 aaKnown RBP1.56□□□□□ -2.16
RPB11YOL005C YPL039WQ03080 316 aa1.56□□□□□ -2.16
RPB11YOL005C SUE1Q06524 206 aa1.56□□□□□ -2.16
RPB11YOL005C NCB2Q92317 146 aa1.56□□□□□ -2.16
RPB11YOL005C PDR18P53756 1333 aa1.56□□□□□ -2.16
RPB11YOL005C LYS2P07702 1392 aa1.56□□□□□ -2.16
RPB11YOL005C UTP10P42945 1769 aaKnown RBP1.55□□□□□ -2.16
RPB11YOL005C TDH2P00358 332 aaKnown RBP1.55□□□□□ -2.16
RPB11YOL005C SSA3P09435 649 aaKnown RBP1.55□□□□□ -2.16
RPB11YOL005C HEK2P38199 381 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
RPB11YOL005C ARN2P38724 620 aa1.55□□□□□ -2.16
RPB11YOL005C RRF1P38771 230 aa1.55□□□□□ -2.16
RPB11YOL005C MED6P38782 295 aa1.55□□□□□ -2.16
RPB11YOL005C FMP33P46998 180 aa1.55□□□□□ -2.16
RPB11YOL005C IBA57P47158 497 aa1.55□□□□□ -2.16
RPB11YOL005C NIF3P53081 288 aa1.55□□□□□ -2.16
RPB11YOL005C TIM21P53220 239 aa1.55□□□□□ -2.16
RPB11YOL005C SSU72P53538 206 aaPredicted RBP1.55□□□□□ -2.16
RPB11YOL005C YMR166CQ03829 368 aa1.55□□□□□ -2.16
RPB11YOL005C SEC10Q06245 871 aa1.55□□□□□ -2.16
RPB11YOL005C CTR3Q06686 241 aa1.55□□□□□ -2.16
RPB11YOL005C RDS3Q06835 107 aaPredicted RBP1.55□□□□□ -2.16
RPB11YOL005C YAL064W-BO13512 126 aa1.54□□□□□ -2.16
RPB11YOL005C HIS3P06633 220 aa1.54□□□□□ -2.16
RPB11YOL005C MET16P18408 261 aaPredicted RBP1.54□□□□□ -2.16
RPB11YOL005C COQ1P18900 473 aa1.54□□□□□ -2.16
RPB11YOL005C COY1P34237 679 aa1.54□□□□□ -2.16
RPB11YOL005C MRPL37P36532 105 aa1.54□□□□□ -2.16
RPB11YOL005C HSM3P38348 480 aa1.54□□□□□ -2.16
RPB11YOL005C SUR2P38992 349 aa1.54□□□□□ -2.16
RPB11YOL005C SCC4P40090 624 aa1.54□□□□□ -2.16
RPB11YOL005C PIR5P46999 287 aa1.54□□□□□ -2.16
RPB11YOL005C YNL095CP53932 642 aa1.54□□□□□ -2.16
RPB11YOL005C RGM1Q00453 211 aa1.54□□□□□ -2.16
RPB11YOL005C CDC14Q00684 551 aa1.54□□□□□ -2.16
RPB11YOL005C ARV1Q06541 321 aa1.54□□□□□ -2.16
RPB11YOL005C ISD11Q6Q560 94 aa1.54□□□□□ -2.16
RPB11YOL005C YOS9Q99220 542 aa1.54□□□□□ -2.16
RPB11YOL005C SAC3P46674 1301 aa1.54□□□□□ -2.16
RPB11YOL005C FIG2P25653 1609 aa1.54□□□□□ -2.16
RPB11YOL005C RPL4AP10664 362 aaKnown RBP1.53□□□□□ -2.16
RPB11YOL005C PEX3P28795 441 aa1.53□□□□□ -2.16
RPB11YOL005C CSG2P35206 410 aa1.53□□□□□ -2.16
RPB11YOL005C SER33P40510 469 aa1.53□□□□□ -2.16
RPB11YOL005C TAD2P47058 250 aa1.53□□□□□ -2.16
RPB11YOL005C DSK2P48510 373 aa1.53□□□□□ -2.16
RPB11YOL005C RPL4BP49626 362 aaKnown RBP1.53□□□□□ -2.16
RPB11YOL005C PEX10Q05568 337 aa1.53□□□□□ -2.16
RPB11YOL005C NKP2Q06162 153 aa1.53□□□□□ -2.16
RPB11YOL005C LOA1Q06508 300 aa1.53□□□□□ -2.16
RPB11YOL005C SLD7Q08457 257 aa1.53□□□□□ -2.16
RPB11YOL005C YDR524C-BQ3E6R4 66 aa1.53□□□□□ -2.16
RPB11YOL005C HKR1P41809 1802 aa1.52□□□□□ -2.17
RPB11YOL005C RPP0P05317 312 aaKnown RBP1.52□□□□□ -2.17
RPB11YOL005C ZWF1P11412 505 aaKnown RBP1.52□□□□□ -2.17
RPB11YOL005C OM45P16547 393 aa1.52□□□□□ -2.17
RPB11YOL005C HMT1P38074 348 aa1.52□□□□□ -2.17
RPB11YOL005C NPT1P39683 429 aaKnown RBP1.52□□□□□ -2.17
RPB11YOL005C RTT105P40063 208 aa1.52□□□□□ -2.17
RPB11YOL005C COA1P40452 197 aa1.52□□□□□ -2.17
RPB11YOL005C YJL118WP47022 219 aa1.52□□□□□ -2.17
RPB11YOL005C GPI8P49018 411 aa1.52□□□□□ -2.17
RPB11YOL005C LSB1P53281 241 aa1.52□□□□□ -2.17
RPB11YOL005C SDC1Q03323 175 aa1.52□□□□□ -2.17
RPB11YOL005C GMC2Q06201 188 aa1.52□□□□□ -2.17
RPB11YOL005C SMD2Q06217 110 aaKnown RBP1.52□□□□□ -2.17
RPB11YOL005C TY3A-GQ12173 290 aa1.52□□□□□ -2.17
RPB11YOL005C TY3A-IQ99219 290 aa1.52□□□□□ -2.17
RPB11YOL005C HIS1P00498 297 aaKnown RBP1.51□□□□□ -2.17
RPB11YOL005C RAD10P06838 210 aa1.51□□□□□ -2.17
RPB11YOL005C MRP1P10662 321 aaKnown RBP1.51□□□□□ -2.17
RPB11YOL005C BMH1P29311 267 aaKnown RBP1.51□□□□□ -2.17
RPB11YOL005C PHO88P38264 188 aaPredicted RBP1.51□□□□□ -2.17
RPB11YOL005C YHI9P38765 294 aa1.51□□□□□ -2.17
RPB11YOL005C RCY1P39531 840 aa1.51□□□□□ -2.17
RPB11YOL005C YJR012CP47087 207 aa1.51□□□□□ -2.17
RPB11YOL005C YJR141WP47172 347 aaPredicted RBP1.51□□□□□ -2.17
RPB11YOL005C OST3P48439 350 aa1.51□□□□□ -2.17
RPB11YOL005C SLX9P53251 210 aaPredicted RBP1.51□□□□□ -2.17
RPB11YOL005C MPP6P53725 186 aaPredicted RBP1.51□□□□□ -2.17
RPB11YOL005C OST6Q03723 332 aa1.51□□□□□ -2.17
RPB11YOL005C GRH1Q04410 372 aaKnown RBP1.51□□□□□ -2.17
RPB11YOL005C YMR321CQ04898 105 aa1.51□□□□□ -2.17
RPB11YOL005C YBL112CQ3E7Y4 105 aa1.51□□□□□ -2.17
RPB11YOL005C YDR034W-BQ6Q5X2 51 aa1.51□□□□□ -2.17
RPB11YOL005C AI5_BETAQ9ZZX0 354 aa1.51□□□□□ -2.17
RPB11YOL005C FLO1P32768 1537 aa1.5□□□□□ -2.17
RPB11YOL005C RPL24AP04449 155 aaKnown RBP1.5□□□□□ -2.17
RPB11YOL005C POX1P13711 748 aa1.5□□□□□ -2.17
RPB11YOL005C SNF6P18888 332 aa1.5□□□□□ -2.17
RPB11YOL005C DPB2P24482 689 aaPredicted RBP1.5□□□□□ -2.17
RPB11YOL005C SFC1P33303 322 aa1.5□□□□□ -2.17
RPB11YOL005C EBP2P36049 427 aaKnown RBP1.5□□□□□ -2.17
RPB11YOL005C DRE2P36152 348 aa1.5□□□□□ -2.17
RPB11YOL005C MAL32P38158 584 aa1.5□□□□□ -2.17
RPB11YOL005C YHL049CP38722 271 aa1.5□□□□□ -2.17
RPB11YOL005C TVP23P38962 199 aa1.5□□□□□ -2.17
RPB11YOL005C GON7P46984 123 aa1.5□□□□□ -2.17
RPB11YOL005C YJL028WP47062 111 aa1.5□□□□□ -2.17
RPB11YOL005C NBP1P52919 319 aaPredicted RBP1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 68.1 ms