RNA–Protein interactions for RNA: YMR004W

MVP1, Transcript of Protein required for sorting proteins to the vacuole, yeastyeast

Gene MVP1, Length 1,536 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MVP1YMR004W MAL12P53341 584 aa1.15□□□□□ -2.22
MVP1YMR004W CUS2P53830 285 aaPredicted RBP1.15□□□□□ -2.22
MVP1YMR004W FMP41P53889 259 aaKnown RBP1.15□□□□□ -2.22
MVP1YMR004W AAH1P53909 347 aa1.15□□□□□ -2.22
MVP1YMR004W SMD1Q02260 146 aaPredicted RBP1.15□□□□□ -2.22
MVP1YMR004W CTF19Q02732 369 aa1.15□□□□□ -2.22
MVP1YMR004W YMR244WQ04018 355 aa1.15□□□□□ -2.22
MVP1YMR004W YMR114CQ04471 368 aaKnown RBP1.15□□□□□ -2.22
MVP1YMR004W ARC18Q05933 178 aaKnown RBP1.15□□□□□ -2.22
MVP1YMR004W GET4Q12125 312 aa1.15□□□□□ -2.22
MVP1YMR004W YAL063C-AQ3E791 96 aa1.15□□□□□ -2.22
MVP1YMR004W BCY1P07278 416 aaKnown RBP1.15□□□□□ -2.23
MVP1YMR004W YKR104WP0CE69 306 aa1.15□□□□□ -2.23
MVP1YMR004W SNA3P14359 133 aa1.15□□□□□ -2.23
MVP1YMR004W YPK2P18961 677 aa1.15□□□□□ -2.23
MVP1YMR004W RPB9P27999 122 aa1.15□□□□□ -2.23
MVP1YMR004W ERG2P32352 222 aa1.15□□□□□ -2.23
MVP1YMR004W ASF2P32448 525 aaPredicted RBP1.15□□□□□ -2.23
MVP1YMR004W PRX1P34227 261 aaKnown RBP1.15□□□□□ -2.23
MVP1YMR004W TAF14P35189 244 aa1.15□□□□□ -2.23
MVP1YMR004W CBT1P36038 271 aaPredicted RBP1.15□□□□□ -2.23
MVP1YMR004W DRE2P36152 348 aa1.15□□□□□ -2.23
MVP1YMR004W HEK2P38199 381 aaKnown RBP RIP-Chip data1.15□□□□□ -2.23not detected
MVP1YMR004W MIC12P38341 106 aa1.15□□□□□ -2.23
MVP1YMR004W YRB2P40517 327 aa1.15□□□□□ -2.23
MVP1YMR004W SYS1P41544 203 aa1.15□□□□□ -2.23
MVP1YMR004W SNZ3P43545 298 aa1.15□□□□□ -2.23
MVP1YMR004W MCM22P47167 239 aa1.15□□□□□ -2.23
MVP1YMR004W YJR149WP47177 404 aa1.15□□□□□ -2.23
MVP1YMR004W CWC23P52868 283 aaPredicted RBP1.15□□□□□ -2.23
MVP1YMR004W UFD1P53044 361 aa1.15□□□□□ -2.23
MVP1YMR004W MGA1P53050 456 aa1.15□□□□□ -2.23
MVP1YMR004W YGL118CP53132 145 aa1.15□□□□□ -2.23
MVP1YMR004W NSA1P53136 463 aaPredicted RBP1.15□□□□□ -2.23
MVP1YMR004W YGL088WP53151 121 aa1.15□□□□□ -2.23
MVP1YMR004W MRH4P53166 561 aa1.15□□□□□ -2.23
MVP1YMR004W MRS2Q01926 470 aa1.15□□□□□ -2.23
MVP1YMR004W PEX10Q05568 337 aa1.15□□□□□ -2.23
MVP1YMR004W SEI1Q06058 285 aa1.15□□□□□ -2.23
MVP1YMR004W PLB3Q08108 686 aa1.15□□□□□ -2.23
MVP1YMR004W ABP140Q08641 628 aaKnown RBP1.15□□□□□ -2.23
MVP1YMR004W RRS1Q08746 203 aaKnown RBP1.15□□□□□ -2.23
MVP1YMR004W YDL211CQ12121 372 aa1.15□□□□□ -2.23
MVP1YMR004W DCN1Q12395 269 aa1.15□□□□□ -2.23
MVP1YMR004W MER1P16523 270 aa1.14□□□□□ -2.23
MVP1YMR004W COX10P21592 462 aa1.14□□□□□ -2.23
MVP1YMR004W CDC10P25342 322 aaKnown RBP1.14□□□□□ -2.23
MVP1YMR004W GDH2P33327 1092 aaKnown RBP1.14□□□□□ -2.23
MVP1YMR004W SGE1P33335 543 aa1.14□□□□□ -2.23
MVP1YMR004W CSG2P35206 410 aa1.14□□□□□ -2.23
MVP1YMR004W PHO89P38361 574 aa1.14□□□□□ -2.23
MVP1YMR004W YHR127WP38833 243 aaKnown RBP1.14□□□□□ -2.23
MVP1YMR004W YHB1P39676 399 aaKnown RBP1.14□□□□□ -2.23
MVP1YMR004W YNL194CP40169 301 aa1.14□□□□□ -2.23
MVP1YMR004W YIL012WP40551 113 aa1.14□□□□□ -2.23
MVP1YMR004W RSM27P53305 110 aa1.14□□□□□ -2.23
MVP1YMR004W SNZ2P53824 298 aa1.14□□□□□ -2.23
MVP1YMR004W TVP15Q03860 143 aa1.14□□□□□ -2.23
MVP1YMR004W SPG4Q04438 115 aa1.14□□□□□ -2.23
MVP1YMR004W CDC123Q05791 360 aa1.14□□□□□ -2.23
MVP1YMR004W YPR147CQ06522 304 aaKnown RBP1.14□□□□□ -2.23
MVP1YMR004W SYC1Q08553 188 aaPredicted RBP1.14□□□□□ -2.23
MVP1YMR004W YOR186WQ08560 144 aa1.14□□□□□ -2.23
MVP1YMR004W TPO4Q12256 659 aa1.14□□□□□ -2.23
MVP1YMR004W ATG5Q12380 294 aa1.14□□□□□ -2.23
MVP1YMR004W YDR157WA0A023PZE8 133 aa1.13□□□□□ -2.23
MVP1YMR004W ERD2P18414 219 aa1.13□□□□□ -2.23
MVP1YMR004W RFA3P26755 122 aaKnown RBP1.13□□□□□ -2.23
MVP1YMR004W IDH1P28834 360 aaKnown RBP RIP-Chip data1.13□□□□□ -2.23not detected
MVP1YMR004W BMH1P29311 267 aaKnown RBP1.13□□□□□ -2.23
MVP1YMR004W VPS51P36116 164 aa1.13□□□□□ -2.23
MVP1YMR004W MRPL39P36533 70 aa1.13□□□□□ -2.23
MVP1YMR004W IKI1P38874 309 aa1.13□□□□□ -2.23
MVP1YMR004W IRC18P47056 224 aa1.13□□□□□ -2.23
MVP1YMR004W ILM1P47155 203 aa1.13□□□□□ -2.23
MVP1YMR004W NUP57P48837 541 aa1.13□□□□□ -2.23
MVP1YMR004W BRR6P53062 197 aa1.13□□□□□ -2.23
MVP1YMR004W TOS8P53147 276 aa1.13□□□□□ -2.23
MVP1YMR004W CAX4P53223 239 aa1.13□□□□□ -2.23
MVP1YMR004W SWT21P53873 357 aaPredicted RBP1.13□□□□□ -2.23
MVP1YMR004W YNL046WP53956 172 aa1.13□□□□□ -2.23
MVP1YMR004W RHO3Q00245 231 aaKnown RBP1.13□□□□□ -2.23
MVP1YMR004W OSH6Q02201 448 aa1.13□□□□□ -2.23
MVP1YMR004W YDR124WQ04608 324 aa1.13□□□□□ -2.23
MVP1YMR004W NNT1Q05874 261 aa1.13□□□□□ -2.23
MVP1YMR004W YPR172WQ06608 200 aa1.13□□□□□ -2.23
MVP1YMR004W YET3Q07451 203 aa1.13□□□□□ -2.23
MVP1YMR004W RRP40Q08285 240 aaKnown RBP1.13□□□□□ -2.23
MVP1YMR004W YLR126CQ12288 251 aa1.13□□□□□ -2.23
MVP1YMR004W SMT3Q12306 101 aaKnown RBP1.13□□□□□ -2.23
MVP1YMR004W JLP1Q12358 412 aa1.13□□□□□ -2.23
MVP1YMR004W YCL012CQ8J0M4 134 aa1.13□□□□□ -2.23
MVP1YMR004W QCR7P00128 127 aa1.12□□□□□ -2.23
MVP1YMR004W HTB1P02293 131 aaKnown RBP1.12□□□□□ -2.23
MVP1YMR004W HTB2P02294 131 aa1.12□□□□□ -2.23
MVP1YMR004W MET2P08465 486 aa1.12□□□□□ -2.23
MVP1YMR004W RPL27AP0C2H6 136 aaKnown RBP1.12□□□□□ -2.23
MVP1YMR004W RPL27BP0C2H7 136 aaKnown RBP1.12□□□□□ -2.23
MVP1YMR004W MATALPHA2P0CY08 210 aa1.12□□□□□ -2.23
MVP1YMR004W HMLALPHA2P0CY09 210 aa1.12□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms