RNA–Protein interactions for RNA: YLR208W

SEC13, Transcript of Structural component of 3 distinct complexes, yeastyeast

Gene SEC13, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC13YLR208W YEF1P32622 495 aa4.72□□□□□ -1.65
SEC13YLR208W ASK1P35734 292 aa4.72□□□□□ -1.65
SEC13YLR208W PRS2P38620 318 aaKnown RBP4.72□□□□□ -1.65
SEC13YLR208W ANS1P38832 159 aa4.72□□□□□ -1.65
SEC13YLR208W PRE6P40303 254 aaKnown RBP4.72□□□□□ -1.65
SEC13YLR208W IRC7P43623 340 aa4.72□□□□□ -1.65
SEC13YLR208W SNX4P47057 423 aa4.72□□□□□ -1.65
SEC13YLR208W TAD2P47058 250 aa4.72□□□□□ -1.65
SEC13YLR208W NAS6P50086 228 aa4.72□□□□□ -1.65
SEC13YLR208W UBP8P50102 471 aa4.72□□□□□ -1.65
SEC13YLR208W PMT5P52867 743 aa4.72□□□□□ -1.65
SEC13YLR208W YIP4P53093 235 aa4.72□□□□□ -1.65
SEC13YLR208W SWF1Q04629 336 aa4.72□□□□□ -1.65
SEC13YLR208W PBP4Q07362 185 aaKnown RBP4.72□□□□□ -1.65
SEC13YLR208W YDL086WQ07505 273 aa4.72□□□□□ -1.65
SEC13YLR208W MSA1Q08471 629 aa4.72□□□□□ -1.65
SEC13YLR208W YPL199CQ08954 240 aa4.72□□□□□ -1.65
SEC13YLR208W ATG34Q12292 412 aa4.72□□□□□ -1.65
SEC13YLR208W WTM1Q12363 437 aaKnown RBP4.72□□□□□ -1.65
SEC13YLR208W NPC2Q12408 173 aa4.72□□□□□ -1.65
SEC13YLR208W NOT5Q12514 560 aaPredicted RBP4.72□□□□□ -1.65
SEC13YLR208W NAM2P11325 894 aa4.71□□□□□ -1.66
SEC13YLR208W BAR1P12630 587 aa4.71□□□□□ -1.66
SEC13YLR208W GCY1P14065 312 aaKnown RBP RIP-Chip data4.71□□□□□ -1.66not detected
SEC13YLR208W HEM15P16622 393 aa4.71□□□□□ -1.66
SEC13YLR208W MCK1P21965 375 aaKnown RBP4.71□□□□□ -1.66
SEC13YLR208W FUN19P28003 413 aaPredicted RBP4.71□□□□□ -1.66
SEC13YLR208W TRR1P29509 319 aaKnown RBP4.71□□□□□ -1.66
SEC13YLR208W VAM7P32912 316 aa4.71□□□□□ -1.66
SEC13YLR208W RIB5P38145 238 aa4.71□□□□□ -1.66
SEC13YLR208W YPT10P38146 199 aa4.71□□□□□ -1.66
SEC13YLR208W AIM3P38266 947 aaKnown RBP4.71□□□□□ -1.66
SEC13YLR208W DER1P38307 211 aa4.71□□□□□ -1.66
SEC13YLR208W PRS3P38689 320 aaKnown RBP4.71□□□□□ -1.66
SEC13YLR208W ATG7P38862 630 aa4.71□□□□□ -1.66
SEC13YLR208W AVT7P40501 490 aa4.71□□□□□ -1.66
SEC13YLR208W REE1P40893 198 aa4.71□□□□□ -1.66
SEC13YLR208W YGR210CP42942 411 aa4.71□□□□□ -1.66
SEC13YLR208W QRI1P43123 477 aaKnown RBP4.71□□□□□ -1.66
SEC13YLR208W GTF1P53260 183 aaPredicted RBP4.71□□□□□ -1.66
SEC13YLR208W YPL077CQ02831 240 aa4.71□□□□□ -1.66
SEC13YLR208W PSF1Q12488 208 aa4.71□□□□□ -1.66
SEC13YLR208W PET20Q99373 253 aa4.71□□□□□ -1.66
SEC13YLR208W HEM2P05373 342 aa4.7□□□□□ -1.66
SEC13YLR208W MRP2P10663 115 aaPredicted RBP4.7□□□□□ -1.66
SEC13YLR208W CBS2P14905 389 aa4.7□□□□□ -1.66
SEC13YLR208W YCR090CP25654 182 aaKnown RBP4.7□□□□□ -1.66
SEC13YLR208W PPZ2P33329 710 aa4.7□□□□□ -1.66
SEC13YLR208W APL3P38065 1025 aa4.7□□□□□ -1.66
SEC13YLR208W CUE1P38428 203 aa4.7□□□□□ -1.66
SEC13YLR208W MTC6P38849 526 aa4.7□□□□□ -1.66
SEC13YLR208W YFR057WP43625 151 aa4.7□□□□□ -1.66
SEC13YLR208W LYS20P48570 428 aaKnown RBP4.7□□□□□ -1.66
SEC13YLR208W SBH2P52871 88 aa4.7□□□□□ -1.66
SEC13YLR208W YIF1P53845 314 aaKnown RBP4.7□□□□□ -1.66
SEC13YLR208W DUG3P53871 357 aa4.7□□□□□ -1.66
SEC13YLR208W MRPL22P53881 309 aa4.7□□□□□ -1.66
SEC13YLR208W IGO1P53897 168 aa4.7□□□□□ -1.66
SEC13YLR208W RPL22BP56628 122 aaKnown RBP4.7□□□□□ -1.66
SEC13YLR208W RHO4Q00246 291 aa4.7□□□□□ -1.66
SEC13YLR208W SNT309Q06091 175 aaPredicted RBP4.7□□□□□ -1.66
SEC13YLR208W YPD1Q07688 167 aa4.7□□□□□ -1.66
SEC13YLR208W YLR053CQ12026 108 aa4.7□□□□□ -1.66
SEC13YLR208W APC9Q12107 265 aa4.7□□□□□ -1.66
SEC13YLR208W JLP1Q12358 412 aa4.7□□□□□ -1.66
SEC13YLR208W ALG7P07286 448 aa4.69□□□□□ -1.66
SEC13YLR208W PUT1P09368 476 aa4.69□□□□□ -1.66
SEC13YLR208W AIM17P23180 465 aaKnown RBP4.69□□□□□ -1.66
SEC13YLR208W KAR4P25583 335 aa4.69□□□□□ -1.66
SEC13YLR208W SAC1P32368 623 aaKnown RBP4.69□□□□□ -1.66
SEC13YLR208W LOS1P33418 1100 aaPredicted RBP4.69□□□□□ -1.66
SEC13YLR208W RPS1AP33442 255 aaKnown RBP4.69□□□□□ -1.66
SEC13YLR208W ETR1P38071 380 aa4.69□□□□□ -1.66
SEC13YLR208W ISC1P40015 477 aaKnown RBP4.69□□□□□ -1.66
SEC13YLR208W SLM1P40485 686 aa4.69□□□□□ -1.66
SEC13YLR208W SYG1P40528 902 aa4.69□□□□□ -1.66
SEC13YLR208W PSA1P41940 361 aaKnown RBP4.69□□□□□ -1.66
SEC13YLR208W TRS85P46944 698 aa4.69□□□□□ -1.66
SEC13YLR208W MIC26P50087 233 aa4.69□□□□□ -1.66
SEC13YLR208W UBC11P52492 156 aa4.69□□□□□ -1.66
SEC13YLR208W AIF1P52923 378 aa4.69□□□□□ -1.66
SEC13YLR208W MGA1P53050 456 aa4.69□□□□□ -1.66
SEC13YLR208W NIF3P53081 288 aa4.69□□□□□ -1.66
SEC13YLR208W NSA1P53136 463 aaPredicted RBP4.69□□□□□ -1.66
SEC13YLR208W CWC25P53854 179 aaKnown RBP4.69□□□□□ -1.66
SEC13YLR208W MET31Q03081 177 aa4.69□□□□□ -1.66
SEC13YLR208W MSS11Q03825 758 aa4.69□□□□□ -1.66
SEC13YLR208W YMR027WQ04371 470 aa4.69□□□□□ -1.66
SEC13YLR208W ASA1Q06822 443 aa4.69□□□□□ -1.66
SEC13YLR208W ASR1Q06834 288 aa4.69□□□□□ -1.66
SEC13YLR208W AHA1Q12449 350 aaKnown RBP4.69□□□□□ -1.66
SEC13YLR208W URA6P15700 204 aa4.68□□□□□ -1.66
SEC13YLR208W DBF2P22204 572 aa4.68□□□□□ -1.66
SEC13YLR208W ITR2P30606 609 aa4.68□□□□□ -1.66
SEC13YLR208W APE2P32454 952 aaKnown RBP4.68□□□□□ -1.66
SEC13YLR208W MCH2P36032 473 aa4.68□□□□□ -1.66
SEC13YLR208W YNL208WP40159 199 aaKnown RBP4.68□□□□□ -1.66
SEC13YLR208W CIN2P46670 268 aa4.68□□□□□ -1.66
SEC13YLR208W YJR056CP47115 236 aa4.68□□□□□ -1.66
SEC13YLR208W YJR154WP47181 346 aa4.68□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 56 ms