RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C COS3P0CX13 379 aa1.96□□□□□ -2.1
YPT52YKR014C MRPL25P23369 157 aa1.96□□□□□ -2.1
YPT52YKR014C CLB6P32943 380 aa1.96□□□□□ -2.1
YPT52YKR014C YBR096WP38256 230 aa1.96□□□□□ -2.1
YPT52YKR014C SUR2P38992 349 aa1.96□□□□□ -2.1
YPT52YKR014C THO1P40040 218 aaKnown RBP1.96□□□□□ -2.1
YPT52YKR014C GCN20P43535 752 aaKnown RBP1.96□□□□□ -2.1
YPT52YKR014C YJL028WP47062 111 aa1.96□□□□□ -2.1
YPT52YKR014C YJR079WP47126 109 aa1.96□□□□□ -2.1
YPT52YKR014C NIF3P53081 288 aa1.96□□□□□ -2.1
YPT52YKR014C CTF19Q02732 369 aa1.96□□□□□ -2.1
YPT52YKR014C SPG4Q04438 115 aa1.96□□□□□ -2.1
YPT52YKR014C YOL019WQ08157 551 aa1.96□□□□□ -2.1
YPT52YKR014C YOR283WQ12040 230 aaKnown RBP1.96□□□□□ -2.1
YPT52YKR014C RPS5P26783 225 aaKnown RBP1.95□□□□□ -2.1
YPT52YKR014C EHD3P28817 500 aa1.95□□□□□ -2.1
YPT52YKR014C NTG1P31378 399 aa1.95□□□□□ -2.1
YPT52YKR014C MRPL39P36533 70 aa1.95□□□□□ -2.1
YPT52YKR014C GOS1P38736 223 aa1.95□□□□□ -2.1
YPT52YKR014C SNZ3P43545 298 aa1.95□□□□□ -2.1
YPT52YKR014C OTU1P43558 301 aa1.95□□□□□ -2.1
YPT52YKR014C SSU72P53538 206 aaPredicted RBP1.95□□□□□ -2.1
YPT52YKR014C NOP13P53883 403 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
YPT52YKR014C GOT1Q03554 138 aa1.95□□□□□ -2.1
YPT52YKR014C YDR124WQ04608 324 aa1.95□□□□□ -2.1
YPT52YKR014C SPO77Q06134 477 aa1.95□□□□□ -2.1
YPT52YKR014C COQ10Q08058 207 aa1.95□□□□□ -2.1
YPT52YKR014C YBL112CQ3E7Y4 105 aa1.95□□□□□ -2.1
YPT52YKR014C YBL008W-AQ3E821 79 aa1.95□□□□□ -2.1
YPT52YKR014C RHO1P06780 209 aaKnown RBP1.94□□□□□ -2.1
YPT52YKR014C RPO26P20435 155 aa1.94□□□□□ -2.1
YPT52YKR014C RPL24BP24000 155 aaKnown RBP1.94□□□□□ -2.1
YPT52YKR014C PPA2P28239 310 aa1.94□□□□□ -2.1
YPT52YKR014C SFC1P33303 322 aa1.94□□□□□ -2.1
YPT52YKR014C MAL32P38158 584 aa1.94□□□□□ -2.1
YPT52YKR014C YHR127WP38833 243 aaKnown RBP1.94□□□□□ -2.1
YPT52YKR014C TEM1P38987 245 aa1.94□□□□□ -2.1
YPT52YKR014C COX15P40086 486 aa1.94□□□□□ -2.1
YPT52YKR014C MSS2P40990 351 aa1.94□□□□□ -2.1
YPT52YKR014C MRH4P53166 561 aa1.94□□□□□ -2.1
YPT52YKR014C MAL12P53341 584 aa1.94□□□□□ -2.1
YPT52YKR014C SNZ2P53824 298 aa1.94□□□□□ -2.1
YPT52YKR014C RDS3Q06835 107 aaPredicted RBP1.94□□□□□ -2.1
YPT52YKR014C SLD7Q08457 257 aa1.94□□□□□ -2.1
YPT52YKR014C DPB2P24482 689 aaPredicted RBP1.93□□□□□ -2.1
YPT52YKR014C YCR102CP25608 368 aa1.93□□□□□ -2.1
YPT52YKR014C DRE2P36152 348 aa1.93□□□□□ -2.1
YPT52YKR014C SSH1P38353 490 aaKnown RBP1.93□□□□□ -2.1
YPT52YKR014C CUE1P38428 203 aa1.93□□□□□ -2.1
YPT52YKR014C YHB1P39676 399 aaKnown RBP1.93□□□□□ -2.1
YPT52YKR014C PIR5P46999 287 aa1.93□□□□□ -2.1
YPT52YKR014C RPC17P47076 161 aa1.93□□□□□ -2.1
YPT52YKR014C OST3P48439 350 aa1.93□□□□□ -2.1
YPT52YKR014C CWC21Q03375 135 aaKnown RBP1.93□□□□□ -2.1
YPT52YKR014C EMI1Q04406 187 aa1.93□□□□□ -2.1
YPT52YKR014C SUE1Q06524 206 aa1.93□□□□□ -2.1
YPT52YKR014C SYC1Q08553 188 aaPredicted RBP1.93□□□□□ -2.1
YPT52YKR014C YPR011CQ12251 326 aa1.93□□□□□ -2.1
YPT52YKR014C YLR126CQ12288 251 aa1.93□□□□□ -2.1
YPT52YKR014C SMT3Q12306 101 aaKnown RBP1.93□□□□□ -2.1
YPT52YKR014C PST1Q12355 444 aa1.93□□□□□ -2.1
YPT52YKR014C YPL247CQ12523 523 aa1.93□□□□□ -2.1
YPT52YKR014C NHP6BP11633 99 aaKnown RBP1.92□□□□□ -2.1
YPT52YKR014C VMA6P32366 345 aaKnown RBP1.92□□□□□ -2.1
YPT52YKR014C RNP1P32385 249 aa1.92□□□□□ -2.1
YPT52YKR014C VPS21P36017 210 aaKnown RBP1.92□□□□□ -2.1
YPT52YKR014C ECM13P38195 257 aa1.92□□□□□ -2.1
YPT52YKR014C MIC12P38341 106 aa1.92□□□□□ -2.1
YPT52YKR014C YGL034CP53186 121 aa1.92□□□□□ -2.1
YPT52YKR014C PGA2P53903 129 aa1.92□□□□□ -2.1
YPT52YKR014C GRH1Q04410 372 aaKnown RBP1.92□□□□□ -2.1
YPT52YKR014C DCR2Q05924 578 aa1.92□□□□□ -2.1
YPT52YKR014C BEM2P39960 2167 aaKnown RBP1.92□□□□□ -2.1
YPT52YKR014C SWI1P09547 1314 aa1.91□□□□□ -2.1
YPT52YKR014C THP2O13539 261 aaKnown RBP1.91□□□□□ -2.1
YPT52YKR014C RPL26AP05743 127 aaKnown RBP1.91□□□□□ -2.1
YPT52YKR014C ARG80P07249 177 aa1.91□□□□□ -2.1
YPT52YKR014C RPB4P20433 221 aaPredicted RBP1.91□□□□□ -2.1
YPT52YKR014C SEC22P22214 214 aa1.91□□□□□ -2.1
YPT52YKR014C PPH21P23594 369 aa1.91□□□□□ -2.1
YPT52YKR014C YKL075CP36083 450 aa1.91□□□□□ -2.1
YPT52YKR014C YMR144WP40214 342 aaKnown RBP1.91□□□□□ -2.1
YPT52YKR014C RPL26BP53221 127 aaKnown RBP1.91□□□□□ -2.1
YPT52YKR014C SEI1Q06058 285 aa1.91□□□□□ -2.1
YPT52YKR014C YLR179CQ06252 201 aaKnown RBP1.91□□□□□ -2.1
YPT52YKR014C COQ1P18900 473 aa1.9□□□□□ -2.11
YPT52YKR014C TOM40P23644 387 aaKnown RBP1.9□□□□□ -2.11
YPT52YKR014C CDC10P25342 322 aaKnown RBP1.9□□□□□ -2.11
YPT52YKR014C PBN1P25580 416 aa1.9□□□□□ -2.11
YPT52YKR014C DOA4P32571 926 aa1.9□□□□□ -2.11
YPT52YKR014C GDH2P33327 1092 aaKnown RBP1.9□□□□□ -2.11
YPT52YKR014C YKT6P36015 200 aaKnown RBP1.9□□□□□ -2.11
YPT52YKR014C MDM34P53083 459 aa1.9□□□□□ -2.11
YPT52YKR014C FCF1Q05498 189 aaPredicted RBP1.9□□□□□ -2.11
YPT52YKR014C YOR186WQ08560 144 aa1.9□□□□□ -2.11
YPT52YKR014C VPS68Q12016 184 aa1.9□□□□□ -2.11
YPT52YKR014C GEP5Q12393 293 aa1.9□□□□□ -2.11
YPT52YKR014C GIS3Q12418 502 aa1.9□□□□□ -2.11
YPT52YKR014C SEY1Q99287 776 aa1.9□□□□□ -2.11
YPT52YKR014C SIR4P11978 1358 aa1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 51.3 ms