RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W HEM4P06174 275 aa1.99□□□□□ -2.09
SNU114YKL173W HIS3P06633 220 aa1.99□□□□□ -2.09
SNU114YKL173W GRX2P17695 143 aaKnown RBP1.99□□□□□ -2.09
SNU114YKL173W AAT2P23542 418 aaKnown RBP1.99□□□□□ -2.09
SNU114YKL173W RPL16AP26784 199 aaKnown RBP1.99□□□□□ -2.09
SNU114YKL173W PRR1P28708 518 aa1.99□□□□□ -2.09
SNU114YKL173W TRS65P32893 560 aa1.99□□□□□ -2.09
SNU114YKL173W PRS2P38620 318 aaKnown RBP1.99□□□□□ -2.09
SNU114YKL173W PRM5P40476 318 aa1.99□□□□□ -2.09
SNU114YKL173W SER33P40510 469 aa1.99□□□□□ -2.09
SNU114YKL173W IMP4P53941 290 aaKnown RBP1.99□□□□□ -2.09
SNU114YKL173W RNY1Q02933 434 aaKnown RBP1.99□□□□□ -2.09
SNU114YKL173W YLR031WQ07978 186 aa1.99□□□□□ -2.09
SNU114YKL173W PRM4Q12498 284 aa1.99□□□□□ -2.09
SNU114YKL173W YKL068W-AQ3E826 78 aa1.99□□□□□ -2.09
SNU114YKL173W TFS1P14306 219 aa1.99□□□□□ -2.09
SNU114YKL173W CPR1P14832 162 aaKnown RBP1.99□□□□□ -2.09
SNU114YKL173W MIR1P23641 311 aaKnown RBP1.99□□□□□ -2.09
SNU114YKL173W YCR101CP25607 182 aa1.99□□□□□ -2.09
SNU114YKL173W CAT2P32796 670 aaKnown RBP1.99□□□□□ -2.09
SNU114YKL173W PDC2P32896 925 aa1.99□□□□□ -2.09
SNU114YKL173W UPS2P35200 230 aa1.99□□□□□ -2.09
SNU114YKL173W COX14P39103 70 aa1.99□□□□□ -2.09
SNU114YKL173W SEN34P39707 275 aa1.99□□□□□ -2.09
SNU114YKL173W MRPL50P53724 139 aa1.99□□□□□ -2.09
SNU114YKL173W ADH6Q04894 360 aaKnown RBP1.99□□□□□ -2.09
SNU114YKL173W SCW10Q04951 389 aa1.99□□□□□ -2.09
SNU114YKL173W MRX9Q07349 420 aaKnown RBP1.99□□□□□ -2.09
SNU114YKL173W YPL150WQ12152 901 aa1.99□□□□□ -2.09
SNU114YKL173W YCL021W-AQ96VH3 125 aa1.99□□□□□ -2.09
SNU114YKL173W TPI1P00942 248 aaKnown RBP1.98□□□□□ -2.09
SNU114YKL173W POX1P13711 748 aa1.98□□□□□ -2.09
SNU114YKL173W NUP2P32499 720 aa1.98□□□□□ -2.09
SNU114YKL173W IES6P32617 166 aa1.98□□□□□ -2.09
SNU114YKL173W RFS1P38234 210 aaKnown RBP1.98□□□□□ -2.09
SNU114YKL173W SHE3P38272 425 aaKnown RBP1.98□□□□□ -2.09
SNU114YKL173W OXA1P39952 402 aa1.98□□□□□ -2.09
SNU114YKL173W DDI1P40087 428 aa1.98□□□□□ -2.09
SNU114YKL173W COG3P40094 801 aa1.98□□□□□ -2.09
SNU114YKL173W IDP2P41939 412 aa1.98□□□□□ -2.09
SNU114YKL173W EGT2P42835 1041 aa1.98□□□□□ -2.09
SNU114YKL173W FMP32P43557 207 aa1.98□□□□□ -2.09
SNU114YKL173W MAL13P53338 473 aa1.98□□□□□ -2.09
SNU114YKL173W BOR1P53838 576 aa1.98□□□□□ -2.09
SNU114YKL173W SWS2P53937 143 aa1.98□□□□□ -2.09
SNU114YKL173W SNO1Q03144 224 aa1.98□□□□□ -2.09
SNU114YKL173W YMR166CQ03829 368 aa1.98□□□□□ -2.09
SNU114YKL173W PRM6Q04705 352 aa1.98□□□□□ -2.09
SNU114YKL173W DYN3Q04949 312 aa1.98□□□□□ -2.09
SNU114YKL173W PEX10Q05568 337 aa1.98□□□□□ -2.09
SNU114YKL173W HNT3Q08702 217 aa1.98□□□□□ -2.09
SNU114YKL173W FDH1Q08911 376 aa1.98□□□□□ -2.09
SNU114YKL173W DAS2Q12084 232 aa1.98□□□□□ -2.09
SNU114YKL173W USB1Q12208 290 aaKnown RBP1.98□□□□□ -2.09
SNU114YKL173W YOR114WQ12219 294 aa1.98□□□□□ -2.09
SNU114YKL173W ERP3Q12403 225 aa1.98□□□□□ -2.09
SNU114YKL173W PIS1P06197 220 aaKnown RBP1.98□□□□□ -2.09
SNU114YKL173W CPT1P17898 393 aa1.98□□□□□ -2.09
SNU114YKL173W CPR4P25334 318 aa1.98□□□□□ -2.09
SNU114YKL173W YCR102CP25608 368 aa1.98□□□□□ -2.09
SNU114YKL173W RPS1AP33442 255 aaKnown RBP1.98□□□□□ -2.09
SNU114YKL173W GPX1P36014 167 aa1.98□□□□□ -2.09
SNU114YKL173W FZO1P38297 855 aa1.98□□□□□ -2.09
SNU114YKL173W RRP3P38712 501 aaKnown RBP1.98□□□□□ -2.09
SNU114YKL173W BDH1P39714 382 aa1.98□□□□□ -2.09
SNU114YKL173W BMT5P40493 336 aa1.98□□□□□ -2.09
SNU114YKL173W MRPL49P40858 161 aaPredicted RBP1.98□□□□□ -2.09
SNU114YKL173W NCA3P46955 337 aa1.98□□□□□ -2.09
SNU114YKL173W ASG7P46993 209 aa1.98□□□□□ -2.09
SNU114YKL173W YPT32P51996 222 aaKnown RBP1.98□□□□□ -2.09
SNU114YKL173W CWC25P53854 179 aaKnown RBP1.98□□□□□ -2.09
SNU114YKL173W YMR315WQ04869 349 aaKnown RBP1.98□□□□□ -2.09
SNU114YKL173W NOC4Q06512 552 aaPredicted RBP1.98□□□□□ -2.09
SNU114YKL173W YET3Q07451 203 aa1.98□□□□□ -2.09
SNU114YKL173W YNG1Q08465 219 aa1.98□□□□□ -2.09
SNU114YKL173W POM33Q12164 279 aa1.98□□□□□ -2.09
SNU114YKL173W KIN28P06242 306 aa1.97□□□□□ -2.09
SNU114YKL173W RPS18AP0CX55 146 aaKnown RBP1.97□□□□□ -2.09
SNU114YKL173W RPS18BP0CX56 146 aaPredicted RBP1.97□□□□□ -2.09
SNU114YKL173W DPM1P14020 267 aaKnown RBP1.97□□□□□ -2.09
SNU114YKL173W RPL16BP26785 198 aaKnown RBP1.97□□□□□ -2.09
SNU114YKL173W TRR1P29509 319 aaKnown RBP1.97□□□□□ -2.09
SNU114YKL173W ITR2P30606 609 aa1.97□□□□□ -2.09
SNU114YKL173W SPT4P32914 102 aaPredicted RBP1.97□□□□□ -2.09
SNU114YKL173W CSE2P33308 149 aa1.97□□□□□ -2.09
SNU114YKL173W SGE1P33335 543 aa1.97□□□□□ -2.09
SNU114YKL173W YKR041WP36134 250 aa1.97□□□□□ -2.09
SNU114YKL173W GOS1P38736 223 aa1.97□□□□□ -2.09
SNU114YKL173W SRP14P38985 146 aa1.97□□□□□ -2.09
SNU114YKL173W PEX22P39718 180 aa1.97□□□□□ -2.09
SNU114YKL173W RMD6P39975 231 aa1.97□□□□□ -2.09
SNU114YKL173W DFG10P40526 253 aa1.97□□□□□ -2.09
SNU114YKL173W TAD2P47058 250 aa1.97□□□□□ -2.09
SNU114YKL173W SHY1P53266 389 aa1.97□□□□□ -2.09
SNU114YKL173W CPD1P53314 239 aa1.97□□□□□ -2.09
SNU114YKL173W ZRG17P53735 605 aa1.97□□□□□ -2.09
SNU114YKL173W GIS2P53849 153 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
SNU114YKL173W COG5P53951 403 aa1.97□□□□□ -2.09
SNU114YKL173W DYN2Q02647 92 aa1.97□□□□□ -2.09
SNU114YKL173W NEJ1Q06148 342 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms