RNA–Protein interactions for RNA: YIL132C

CSM2, Transcript of Component of Shu complex (aka PCSS complex), yeast

Gene CSM2, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSM2	YIL132C	DAN1	P47178	298 aa		3.96	□□□□□ -1.78
CSM2	YIL132C	RSM10	Q03201	203 aa		3.96	□□□□□ -1.78
CSM2	YIL132C	YPR147C	Q06522	304 aa	Known RBP	3.96	□□□□□ -1.78
CSM2	YIL132C	MSF1	P08425	469 aa		3.95	□□□□□ -1.78
CSM2	YIL132C	MRX3	P38172	270 aa		3.95	□□□□□ -1.78
CSM2	YIL132C	SSH1	P38353	490 aa	Known RBP	3.95	□□□□□ -1.78
CSM2	YIL132C	YDR209C	Q03480	137 aa		3.95	□□□□□ -1.78
CSM2	YIL132C	EHD3	P28817	500 aa		3.94	□□□□□ -1.78
CSM2	YIL132C	SCM4	P32564	187 aa		3.94	□□□□□ -1.78
CSM2	YIL132C	MRH4	P53166	561 aa		3.94	□□□□□ -1.78
CSM2	YIL132C	YDR124W	Q04608	324 aa		3.94	□□□□□ -1.78
CSM2	YIL132C	COQ10	Q08058	207 aa		3.94	□□□□□ -1.78
CSM2	YIL132C	SEC22	P22214	214 aa		3.93	□□□□□ -1.78
CSM2	YIL132C	RCN1	P36054	211 aa		3.93	□□□□□ -1.78
CSM2	YIL132C	BIG1	P38813	335 aa		3.93	□□□□□ -1.78
CSM2	YIL132C	SNZ3	P43545	298 aa		3.93	□□□□□ -1.78
CSM2	YIL132C	ASI3	P53983	676 aa		3.93	□□□□□ -1.78
CSM2	YIL132C	SDO1	Q07953	250 aa	Known RBP	3.93	□□□□□ -1.78
CSM2	YIL132C	HOM6	P31116	359 aa	Known RBP	3.92	□□□□□ -1.78
CSM2	YIL132C	PRS4	P38063	326 aa	Predicted RBP	3.92	□□□□□ -1.78
CSM2	YIL132C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.92	□□□□□ -1.78	not detected
CSM2	YIL132C	YKR104W	P0CE69	306 aa		3.91	□□□□□ -1.78
CSM2	YIL132C	NRG2	P38082	220 aa		3.91	□□□□□ -1.78
CSM2	YIL132C	GLG2	P47011	380 aa		3.91	□□□□□ -1.78
CSM2	YIL132C	GOT1	Q03554	138 aa		3.91	□□□□□ -1.78
CSM2	YIL132C	YPR098C	Q06089	161 aa		3.91	□□□□□ -1.78
CSM2	YIL132C	YLR179C	Q06252	201 aa	Known RBP	3.91	□□□□□ -1.78
CSM2	YIL132C	YOL107W	Q12239	342 aa		3.91	□□□□□ -1.78
CSM2	YIL132C	RSR1	P13856	272 aa		3.9	□□□□□ -1.79
CSM2	YIL132C	CCA1	P21269	546 aa		3.9	□□□□□ -1.79
CSM2	YIL132C	YOR062C	P36025	268 aa		3.9	□□□□□ -1.79
CSM2	YIL132C	YER189W	P40104	122 aa		3.9	□□□□□ -1.79
CSM2	YIL132C	SYC1	Q08553	188 aa	Predicted RBP	3.9	□□□□□ -1.79
CSM2	YIL132C	RNA15	P25299	296 aa	Predicted RBP	3.89	□□□□□ -1.79
CSM2	YIL132C	COS8	P38723	381 aa		3.89	□□□□□ -1.79
CSM2	YIL132C	THO1	P40040	218 aa	Known RBP	3.89	□□□□□ -1.79
CSM2	YIL132C	CTF19	Q02732	369 aa		3.89	□□□□□ -1.79
CSM2	YIL132C	SWI1	P09547	1314 aa		3.89	□□□□□ -1.79
CSM2	YIL132C	YCR102C	P25608	368 aa		3.88	□□□□□ -1.79
CSM2	YIL132C	YBR096W	P38256	230 aa		3.88	□□□□□ -1.79
CSM2	YIL132C	SNX4	P47057	423 aa		3.88	□□□□□ -1.79
CSM2	YIL132C	DCR2	Q05924	578 aa		3.88	□□□□□ -1.79
CSM2	YIL132C	BBP1	Q12365	385 aa		3.88	□□□□□ -1.79
CSM2	YIL132C	RPT5	P33297	434 aa	Known RBP	3.87	□□□□□ -1.79
CSM2	YIL132C	YHB1	P39676	399 aa	Known RBP	3.87	□□□□□ -1.79
CSM2	YIL132C	USE1	P53146	245 aa		3.87	□□□□□ -1.79
CSM2	YIL132C	SPG4	Q04438	115 aa		3.87	□□□□□ -1.79
CSM2	YIL132C	RRP40	Q08285	240 aa	Known RBP	3.87	□□□□□ -1.79
CSM2	YIL132C	YLR462W	O13556	202 aa		3.86	□□□□□ -1.79
CSM2	YIL132C	SGE1	P33335	543 aa		3.86	□□□□□ -1.79
CSM2	YIL132C	YUH1	P35127	236 aa		3.86	□□□□□ -1.79
CSM2	YIL132C	MRPL39	P36533	70 aa		3.86	□□□□□ -1.79
CSM2	YIL132C	FZO1	P38297	855 aa		3.86	□□□□□ -1.79
CSM2	YIL132C	GOS1	P38736	223 aa		3.86	□□□□□ -1.79
CSM2	YIL132C	YEL075C	P39972	122 aa		3.86	□□□□□ -1.79
CSM2	YIL132C	SNZ2	P53824	298 aa		3.86	□□□□□ -1.79
CSM2	YIL132C	RRT8	Q08219	342 aa		3.86	□□□□□ -1.79
CSM2	YIL132C	FCY21	P40039	528 aa		3.85	□□□□□ -1.79
CSM2	YIL132C	YJL027C	P47063	138 aa	Predicted RBP	3.85	□□□□□ -1.79
CSM2	YIL132C	RRS1	Q08746	203 aa	Known RBP	3.85	□□□□□ -1.79
CSM2	YIL132C	CSM4	Q08955	156 aa		3.85	□□□□□ -1.79
CSM2	YIL132C	ARC15	P40518	154 aa	RIP-Chip data	3.84	□□□□□ -1.79	not detected
CSM2	YIL132C	YOR186W	Q08560	144 aa		3.84	□□□□□ -1.79
CSM2	YIL132C	YHR086W-A	Q3E746	53 aa		3.84	□□□□□ -1.79
CSM2	YIL132C	YCT1	Q12235	531 aa		3.83	□□□□□ -1.8
CSM2	YIL132C	YOR029W	Q12243	111 aa		3.83	□□□□□ -1.8
CSM2	YIL132C	MHT1	Q12525	324 aa		3.83	□□□□□ -1.8
CSM2	YIL132C	INO80	P53115	1489 aa		3.82	□□□□□ -1.8
CSM2	YIL132C	PUT1	P09368	476 aa		3.82	□□□□□ -1.8
CSM2	YIL132C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.82	□□□□□ -1.8	not detected
CSM2	YIL132C	FAR8	Q05040	523 aa		3.82	□□□□□ -1.8
CSM2	YIL132C	MSH5	Q12175	901 aa		3.82	□□□□□ -1.8
CSM2	YIL132C	Q0255	P03881	472 aa		3.81	□□□□□ -1.8
CSM2	YIL132C	DOA4	P32571	926 aa		3.81	□□□□□ -1.8
CSM2	YIL132C	MSA2	P36157	363 aa		3.81	□□□□□ -1.8
CSM2	YIL132C	SNU23	Q12368	194 aa	Predicted RBP	3.81	□□□□□ -1.8
CSM2	YIL132C	YHR032W-A	P0C5N6	59 aa		3.8	□□□□□ -1.8
CSM2	YIL132C	YHR125W	P38831	101 aa		3.8	□□□□□ -1.8
CSM2	YIL132C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	3.8	□□□□□ -1.8	not detected
CSM2	YIL132C	SMD3	P43321	101 aa	Known RBP	3.8	□□□□□ -1.8
CSM2	YIL132C	BNA6	P43619	295 aa		3.8	□□□□□ -1.8
CSM2	YIL132C	YGL159W	P53110	370 aa		3.79	□□□□□ -1.8
CSM2	YIL132C	RHO3	Q00245	231 aa	Known RBP	3.79	□□□□□ -1.8
CSM2	YIL132C	YLR030W	Q07967	263 aa		3.79	□□□□□ -1.8
CSM2	YIL132C	FKS1	P38631	1876 aa	Known RBP	3.78	□□□□□ -1.8
CSM2	YIL132C	ERG24	P32462	438 aa	Known RBP	3.78	□□□□□ -1.8
CSM2	YIL132C	YMR279C	Q03263	540 aa		3.78	□□□□□ -1.8
CSM2	YIL132C	YLR173W	Q06247	608 aa		3.78	□□□□□ -1.8
CSM2	YIL132C	YNL134C	P53912	376 aa	Known RBP	3.77	□□□□□ -1.81
CSM2	YIL132C	YHR127W	P38833	243 aa	Known RBP	3.76	□□□□□ -1.81
CSM2	YIL132C	JHD2	P47156	728 aa	Predicted RBP	3.76	□□□□□ -1.81
CSM2	YIL132C	YGR026W	P53217	278 aa		3.76	□□□□□ -1.81
CSM2	YIL132C	YNL046W	P53956	172 aa		3.76	□□□□□ -1.81
CSM2	YIL132C	INM2	Q05533	292 aa		3.76	□□□□□ -1.81
CSM2	YIL132C	YPR172W	Q06608	200 aa		3.76	□□□□□ -1.81
CSM2	YIL132C	COX5A	P00424	153 aa		3.75	□□□□□ -1.81
CSM2	YIL132C	BAT2	P47176	376 aa	Known RBP	3.75	□□□□□ -1.81
CSM2	YIL132C	PRM15	Q03262	622 aa		3.75	□□□□□ -1.81
CSM2	YIL132C	AKR2	Q12013	749 aa		3.75	□□□□□ -1.81
CSM2	YIL132C	YJR079W	P47126	109 aa		3.74	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms