RNA–Protein interactions for RNA: YIL118W

RHO3, Transcript of Non-essential small GTPase of the Rho/Rac family of Ras-like proteins, yeast

Gene RHO3, Length 696 nt, Biotype protein coding, Subcellular localisation Cellular bud .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RHO3	YIL118W	ASC1	P38011	319 aa	Known RBP	4.88	□□□□□ -1.63
RHO3	YIL118W	YPT35	P38815	214 aa	Known RBP	4.88	□□□□□ -1.63
RHO3	YIL118W	LYS12	P40495	371 aa	Known RBP	4.88	□□□□□ -1.63
RHO3	YIL118W	FRE4	P53746	719 aa		4.88	□□□□□ -1.63
RHO3	YIL118W	MAK3	Q03503	176 aa		4.88	□□□□□ -1.63
RHO3	YIL118W	CGI121	Q03705	181 aa	Known RBP	4.88	□□□□□ -1.63
RHO3	YIL118W	HSP31	Q04432	237 aa		4.88	□□□□□ -1.63
RHO3	YIL118W	SEI1	Q06058	285 aa		4.88	□□□□□ -1.63
RHO3	YIL118W	FEX2	Q08991	375 aa		4.88	□□□□□ -1.63
RHO3	YIL118W	LCB4	Q12246	624 aa		4.88	□□□□□ -1.63
RHO3	YIL118W	TRM10	Q12400	293 aa		4.88	□□□□□ -1.63
RHO3	YIL118W	RAX2	Q12465	1220 aa		4.88	□□□□□ -1.63
RHO3	YIL118W	YPR014C	Q6B0W2	109 aa		4.88	□□□□□ -1.63
RHO3	YIL118W	MLP2	P40457	1679 aa		4.88	□□□□□ -1.63
RHO3	YIL118W	GDB1	Q06625	1536 aa		4.87	□□□□□ -1.63
RHO3	YIL118W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.87	□□□□□ -1.63
RHO3	YIL118W	COR1	P07256	457 aa		4.87	□□□□□ -1.63
RHO3	YIL118W	CHO1	P08456	276 aa		4.87	□□□□□ -1.63
RHO3	YIL118W	RPS18A	P0CX55	146 aa	Known RBP	4.87	□□□□□ -1.63
RHO3	YIL118W	RPS18B	P0CX56	146 aa	Predicted RBP	4.87	□□□□□ -1.63
RHO3	YIL118W	PCL1	P24867	279 aa		4.87	□□□□□ -1.63
RHO3	YIL118W	ELO2	P25358	347 aa		4.87	□□□□□ -1.63
RHO3	YIL118W	HOM6	P31116	359 aa	Known RBP	4.87	□□□□□ -1.63
RHO3	YIL118W	MRPL9	P31334	269 aa		4.87	□□□□□ -1.63
RHO3	YIL118W	FRE2	P36033	711 aa		4.87	□□□□□ -1.63
RHO3	YIL118W	YKL075C	P36083	450 aa		4.87	□□□□□ -1.63
RHO3	YIL118W	YKR041W	P36134	250 aa		4.87	□□□□□ -1.63
RHO3	YIL118W	YIL060W	P40519	144 aa		4.87	□□□□□ -1.63
RHO3	YIL118W	MEP2	P41948	499 aa		4.87	□□□□□ -1.63
RHO3	YIL118W	NSE4	P43124	402 aa		4.87	□□□□□ -1.63
RHO3	YIL118W	YJR079W	P47126	109 aa		4.87	□□□□□ -1.63
RHO3	YIL118W	VEL1	P53058	206 aa		4.87	□□□□□ -1.63
RHO3	YIL118W	CDH1	P53197	566 aa		4.87	□□□□□ -1.63
RHO3	YIL118W	TAM41	P53230	385 aa		4.87	□□□□□ -1.63
RHO3	YIL118W	AIM36	Q03798	255 aa		4.87	□□□□□ -1.63
RHO3	YIL118W	TSA2	Q04120	196 aa		4.87	□□□□□ -1.63
RHO3	YIL118W	CAC2	Q04199	468 aa		4.87	□□□□□ -1.63
RHO3	YIL118W	YTH1	Q06102	208 aa	Predicted RBP	4.87	□□□□□ -1.63
RHO3	YIL118W	DIC1	Q06143	298 aa		4.87	□□□□□ -1.63
RHO3	YIL118W	NKP2	Q06162	153 aa		4.87	□□□□□ -1.63
RHO3	YIL118W	MDM32	Q12171	622 aa		4.87	□□□□□ -1.63
RHO3	YIL118W	YCT1	Q12235	531 aa		4.87	□□□□□ -1.63
RHO3	YIL118W	ATP14	Q12349	124 aa		4.87	□□□□□ -1.63
RHO3	YIL118W	VAR1	P02381	398 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	RPL31A	P0C2H8	113 aa	Known RBP	4.86	□□□□□ -1.63
RHO3	YIL118W	RPL31B	P0C2H9	113 aa	Known RBP	4.86	□□□□□ -1.63
RHO3	YIL118W	YLL053C	P0CD98	152 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	POF1	P25576	258 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	MGT1	P26188	188 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	BUB3	P26449	341 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	URK1	P27515	501 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	CNE1	P27825	502 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	MSK1	P32048	576 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	SPS18	P32572	300 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	TIR2	P33890	251 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	SFK1	P35735	353 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	HOT13	P36078	116 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	PAN3	P36102	679 aa	Predicted RBP	4.86	□□□□□ -1.63
RHO3	YIL118W	YPC1	P38298	316 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	YAL037W	P39728	267 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	YEA6	P39953	335 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	KRE29	P40026	464 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	AYR1	P40471	297 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	XBP1	P40489	647 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	AZF1	P41696	914 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	MIC26	P50087	233 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	BRR6	P53062	197 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	STR3	P53101	465 aa	Known RBP	4.86	□□□□□ -1.63
RHO3	YIL118W	ALG13	P53178	202 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	YGR168C	P53293	376 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	DAD3	P69850	94 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	GOT1	Q03554	138 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	RAV2	Q03956	351 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	HNT1	Q04344	158 aa	Known RBP	4.86	□□□□□ -1.63
RHO3	YIL118W	TAF9	Q05027	157 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	YMR034C	Q05131	434 aa	Predicted RBP	4.86	□□□□□ -1.63
RHO3	YIL118W	MDM30	Q05930	598 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	STP3	Q05937	343 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	MCH1	Q07376	486 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
RHO3	YIL118W	SIA1	Q12212	622 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	ICT1	Q12385	394 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	YLR099W-A	Q3E798	87 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	AI5_ALPHA	Q9ZZX1	630 aa		4.86	□□□□□ -1.63
RHO3	YIL118W	SPT6	P23615	1451 aa	Known RBP	4.86	□□□□□ -1.63
RHO3	YIL118W	RPO21	P04050	1733 aa	Known RBP	4.86	□□□□□ -1.63
RHO3	YIL118W	REP2	P03872	296 aa		4.85	□□□□□ -1.63
RHO3	YIL118W	ADK1	P07170	222 aa	Known RBP	4.85	□□□□□ -1.63
RHO3	YIL118W	YFR010W-A	P0C5N0	62 aa		4.85	□□□□□ -1.63
RHO3	YIL118W	EXO70	P19658	623 aa		4.85	□□□□□ -1.63
RHO3	YIL118W	YCR102C	P25608	368 aa		4.85	□□□□□ -1.63
RHO3	YIL118W	LDS1	P31379	325 aa		4.85	□□□□□ -1.63
RHO3	YIL118W	YHR177W	P38867	453 aa		4.85	□□□□□ -1.63
RHO3	YIL118W	SNU13	P39990	126 aa	Known RBP	4.85	□□□□□ -1.63
RHO3	YIL118W	UBX6	P47049	396 aa		4.85	□□□□□ -1.63
RHO3	YIL118W	TRM9	P49957	279 aa		4.85	□□□□□ -1.63
RHO3	YIL118W	PYK2	P52489	506 aa	Known RBP	4.85	□□□□□ -1.63
RHO3	YIL118W	YIP1	P53039	248 aa		4.85	□□□□□ -1.63
RHO3	YIL118W	MKC7	P53379	596 aa		4.85	□□□□□ -1.63
RHO3	YIL118W	BIO4	P53630	237 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 7.1 ms