RNA–Protein interactions for RNA: YHR148W

IMP3, Transcript of Component of the SSU processome, yeastyeast

Gene IMP3, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IMP3YHR148W SPO77Q06134 477 aa2.58□□□□□ -2
IMP3YHR148W COQ10Q08058 207 aa2.58□□□□□ -2
IMP3YHR148W HOM6P31116 359 aaKnown RBP2.57□□□□□ -2
IMP3YHR148W SNZ3P43545 298 aa2.57□□□□□ -2
IMP3YHR148W MNN5P46982 586 aa2.57□□□□□ -2
IMP3YHR148W ASI3P53983 676 aa2.57□□□□□ -2
IMP3YHR148W YLR179CQ06252 201 aaKnown RBP2.57□□□□□ -2
IMP3YHR148W ATG17Q06410 417 aa2.57□□□□□ -2
IMP3YHR148W YPR147CQ06522 304 aaKnown RBP2.57□□□□□ -2
IMP3YHR148W YOR029WQ12243 111 aa2.57□□□□□ -2
IMP3YHR148W EMP46Q12396 444 aa2.57□□□□□ -2
IMP3YHR148W SWI1P09547 1314 aa2.57□□□□□ -2
IMP3YHR148W RAD3P06839 778 aa2.56□□□□□ -2
IMP3YHR148W SEC22P22214 214 aa2.56□□□□□ -2
IMP3YHR148W COS6P53344 381 aa2.56□□□□□ -2
IMP3YHR148W YDR209CQ03480 137 aa2.56□□□□□ -2
IMP3YHR148W CGI121Q03705 181 aaKnown RBP2.56□□□□□ -2
IMP3YHR148W PEX12Q04370 399 aa2.56□□□□□ -2
IMP3YHR148W YKR104WP0CE69 306 aa2.55□□□□□ -2
IMP3YHR148W GOS1P38736 223 aa2.55□□□□□ -2
IMP3YHR148W MRH4P53166 561 aa2.55□□□□□ -2
IMP3YHR148W MSH5Q12175 901 aa2.55□□□□□ -2
IMP3YHR148W RNA15P25299 296 aaPredicted RBP2.54□□□□□ -2
IMP3YHR148W MRPL49P40858 161 aaPredicted RBP2.54□□□□□ -2
IMP3YHR148W USE1P53146 245 aa2.54□□□□□ -2
IMP3YHR148W YNL134CP53912 376 aaKnown RBP2.54□□□□□ -2
IMP3YHR148W YPR098CQ06089 161 aa2.54□□□□□ -2
IMP3YHR148W TY3A-GQ12173 290 aa2.54□□□□□ -2
IMP3YHR148W TY3A-IQ99219 290 aa2.54□□□□□ -2
IMP3YHR148W SAS5Q99314 248 aa2.54□□□□□ -2
IMP3YHR148W BEM2P39960 2167 aaKnown RBP2.53□□□□□ -2
IMP3YHR148W SCO1P23833 295 aa2.53□□□□□ -2
IMP3YHR148W RCN1P36054 211 aa2.53□□□□□ -2
IMP3YHR148W THO1P40040 218 aaKnown RBP2.53□□□□□ -2
IMP3YHR148W BNA6P43619 295 aa2.53□□□□□ -2
IMP3YHR148W DAN1P47178 298 aa2.53□□□□□ -2
IMP3YHR148W SNZ2P53824 298 aa2.53□□□□□ -2
IMP3YHR148W SPG4Q04438 115 aa2.53□□□□□ -2
IMP3YHR148W YDR124WQ04608 324 aa2.53□□□□□ -2
IMP3YHR148W SSH1P38353 490 aaKnown RBP2.52□□□□□ -2.01
IMP3YHR148W YGP1P38616 354 aaKnown RBP2.52□□□□□ -2.01
IMP3YHR148W YHL026CP38740 315 aa2.52□□□□□ -2.01
IMP3YHR148W OST2P46964 130 aa2.52□□□□□ -2.01
IMP3YHR148W JHD2P47156 728 aaPredicted RBP2.52□□□□□ -2.01
IMP3YHR148W GOT1Q03554 138 aa2.52□□□□□ -2.01
IMP3YHR148W YLR173WQ06247 608 aa2.52□□□□□ -2.01
IMP3YHR148W RRP40Q08285 240 aaKnown RBP2.52□□□□□ -2.01
IMP3YHR148W SYC1Q08553 188 aaPredicted RBP2.52□□□□□ -2.01
IMP3YHR148W CSM4Q08955 156 aa2.52□□□□□ -2.01
IMP3YHR148W BBP1Q12365 385 aa2.52□□□□□ -2.01
IMP3YHR148W TCP1P12612 559 aaKnown RBP2.51□□□□□ -2.01
IMP3YHR148W SGE1P33335 543 aa2.51□□□□□ -2.01
IMP3YHR148W YER189WP40104 122 aa2.51□□□□□ -2.01
IMP3YHR148W SMD3P43321 101 aaKnown RBP2.51□□□□□ -2.01
IMP3YHR148W YOR186WQ08560 144 aa2.51□□□□□ -2.01
IMP3YHR148W YOR283WQ12040 230 aaKnown RBP2.51□□□□□ -2.01
IMP3YHR148W YCT1Q12235 531 aa2.51□□□□□ -2.01
IMP3YHR148W ATG31Q12421 196 aa2.51□□□□□ -2.01
IMP3YHR148W MSA2P36157 363 aa2.5□□□□□ -2.01
IMP3YHR148W YHB1P39676 399 aaKnown RBP2.5□□□□□ -2.01
IMP3YHR148W YCR102CP25608 368 aa2.49□□□□□ -2.01
IMP3YHR148W GRE3P38715 327 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
IMP3YHR148W BFR1P38934 470 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01 RIP-Chip
IMP3YHR148W RHO3Q00245 231 aaKnown RBP2.49□□□□□ -2.01
IMP3YHR148W EMC6Q12431 108 aa2.49□□□□□ -2.01
IMP3YHR148W YLR462WO13556 202 aa2.48□□□□□ -2.01
IMP3YHR148W SCM4P32564 187 aa2.48□□□□□ -2.01
IMP3YHR148W YOR062CP36025 268 aa2.48□□□□□ -2.01
IMP3YHR148W MRPL39P36533 70 aa2.48□□□□□ -2.01
IMP3YHR148W FZO1P38297 855 aa2.48□□□□□ -2.01
IMP3YHR148W COS8P38723 381 aa2.48□□□□□ -2.01
IMP3YHR148W YEL075CP39972 122 aa2.48□□□□□ -2.01
IMP3YHR148W FCY21P40039 528 aa2.48□□□□□ -2.01
IMP3YHR148W SNX4P47057 423 aa2.48□□□□□ -2.01
IMP3YHR148W HOC1P47124 396 aa2.48□□□□□ -2.01
IMP3YHR148W YJR079WP47126 109 aa2.48□□□□□ -2.01
IMP3YHR148W YNL046WP53956 172 aa2.48□□□□□ -2.01
IMP3YHR148W YLR030WQ07967 263 aa2.48□□□□□ -2.01
IMP3YHR148W RRS1Q08746 203 aaKnown RBP2.48□□□□□ -2.01
IMP3YHR148W YHR032W-AP0C5N6 59 aa2.47□□□□□ -2.01
IMP3YHR148W CCA1P21269 546 aa2.47□□□□□ -2.01
IMP3YHR148W YJL027CP47063 138 aaPredicted RBP2.47□□□□□ -2.01
IMP3YHR148W YGL159WP53110 370 aa2.47□□□□□ -2.01
IMP3YHR148W RRN5Q02983 363 aa2.47□□□□□ -2.01
IMP3YHR148W DCR2Q05924 578 aa2.47□□□□□ -2.01
IMP3YHR148W PAM18Q07914 168 aa2.47□□□□□ -2.01
IMP3YHR148W YPL229WQ99395 206 aa2.47□□□□□ -2.01
IMP3YHR148W YKL075CP36083 450 aa2.46□□□□□ -2.02
IMP3YHR148W NRG2P38082 220 aa2.46□□□□□ -2.02
IMP3YHR148W SNU23Q12368 194 aaPredicted RBP2.46□□□□□ -2.02
IMP3YHR148W COX5AP00424 153 aa2.45□□□□□ -2.02
IMP3YHR148W Q0255P03881 472 aa2.45□□□□□ -2.02
IMP3YHR148W ERG24P32462 438 aaKnown RBP2.45□□□□□ -2.02
IMP3YHR148W YHR125WP38831 101 aa2.45□□□□□ -2.02
IMP3YHR148W YHR127WP38833 243 aaKnown RBP2.45□□□□□ -2.02
IMP3YHR148W CTR2P38865 189 aa2.45□□□□□ -2.02
IMP3YHR148W ARC15P40518 154 aaRIP-Chip data2.45□□□□□ -2.02not detected
IMP3YHR148W SRL4Q03085 281 aa2.45□□□□□ -2.02
IMP3YHR148W YPR172WQ06608 200 aa2.45□□□□□ -2.02
IMP3YHR148W MED4Q12343 284 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 60 ms