RNA–Protein interactions for RNA: YHR052W

CIC1, Transcript of Essential protein that interacts with proteasome components, yeastyeast

Gene CIC1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIC1YHR052W MRPS17Q03246 237 aaPredicted RBP1.28□□□□□ -2.2
CIC1YHR052W BNA7Q04066 261 aa1.28□□□□□ -2.2
CIC1YHR052W YMR226CQ05016 267 aaKnown RBP1.28□□□□□ -2.2
CIC1YHR052W FMP16Q12497 93 aa1.28□□□□□ -2.2
CIC1YHR052W BOL1Q3E793 110 aa1.28□□□□□ -2.2
CIC1YHR052W SEY1Q99287 776 aa1.28□□□□□ -2.2
CIC1YHR052W PUT1P09368 476 aa1.27□□□□□ -2.21
CIC1YHR052W FRS2P15625 503 aaKnown RBP1.27□□□□□ -2.21
CIC1YHR052W MER1P16523 270 aa1.27□□□□□ -2.21
CIC1YHR052W RPL24BP24000 155 aaKnown RBP1.27□□□□□ -2.21
CIC1YHR052W MEK1P24719 497 aaPredicted RBP1.27□□□□□ -2.21
CIC1YHR052W ARC19P33204 171 aaKnown RBP1.27□□□□□ -2.21
CIC1YHR052W PRS4P38063 326 aaPredicted RBP1.27□□□□□ -2.21
CIC1YHR052W HIS2P38635 335 aa1.27□□□□□ -2.21
CIC1YHR052W SIP3P38717 1229 aa1.27□□□□□ -2.21
CIC1YHR052W COX15P40086 486 aa1.27□□□□□ -2.21
CIC1YHR052W DDI1P40087 428 aa1.27□□□□□ -2.21
CIC1YHR052W YRB2P40517 327 aa1.27□□□□□ -2.21
CIC1YHR052W SNX4P47057 423 aa1.27□□□□□ -2.21
CIC1YHR052W PNC1P53184 216 aaKnown RBP1.27□□□□□ -2.21
CIC1YHR052W PEX31P53203 462 aa1.27□□□□□ -2.21
CIC1YHR052W SPP2Q02521 185 aa1.27□□□□□ -2.21
CIC1YHR052W TRM44Q02648 567 aaKnown RBP1.27□□□□□ -2.21
CIC1YHR052W SEC10Q06245 871 aa1.27□□□□□ -2.21
CIC1YHR052W PAM18Q07914 168 aa1.27□□□□□ -2.21
CIC1YHR052W CMC2Q3E7A4 109 aa1.27□□□□□ -2.21
CIC1YHR052W DAL82P21705 255 aa1.26□□□□□ -2.21
CIC1YHR052W MSN4P33749 630 aa1.26□□□□□ -2.21
CIC1YHR052W VPS21P36017 210 aaKnown RBP1.26□□□□□ -2.21
CIC1YHR052W MAL32P38158 584 aa1.26□□□□□ -2.21
CIC1YHR052W MRX3P38172 270 aa1.26□□□□□ -2.21
CIC1YHR052W ECM13P38195 257 aa1.26□□□□□ -2.21
CIC1YHR052W EGD2P38879 174 aaKnown RBP1.26□□□□□ -2.21
CIC1YHR052W THO1P40040 218 aaKnown RBP1.26□□□□□ -2.21
CIC1YHR052W BNA6P43619 295 aa1.26□□□□□ -2.21
CIC1YHR052W GLG2P47011 380 aa1.26□□□□□ -2.21
CIC1YHR052W MAL12P53341 584 aa1.26□□□□□ -2.21
CIC1YHR052W EMI1Q04406 187 aa1.26□□□□□ -2.21
CIC1YHR052W YPR172WQ06608 200 aa1.26□□□□□ -2.21
CIC1YHR052W BTS1Q12051 335 aa1.26□□□□□ -2.21
CIC1YHR052W GET4Q12125 312 aa1.26□□□□□ -2.21
CIC1YHR052W SAS5Q99314 248 aa1.26□□□□□ -2.21
CIC1YHR052W AI5_BETAQ9ZZX0 354 aa1.26□□□□□ -2.21
CIC1YHR052W FKS1P38631 1876 aaKnown RBP1.26□□□□□ -2.21
CIC1YHR052W MRP1P10662 321 aaKnown RBP1.25□□□□□ -2.21
CIC1YHR052W MET16P18408 261 aaPredicted RBP1.25□□□□□ -2.21
CIC1YHR052W YPK2P18961 677 aa1.25□□□□□ -2.21
CIC1YHR052W RNA15P25299 296 aaPredicted RBP1.25□□□□□ -2.21
CIC1YHR052W PPA2P28239 310 aa1.25□□□□□ -2.21
CIC1YHR052W VMA6P32366 345 aaKnown RBP1.25□□□□□ -2.21
CIC1YHR052W ASF2P32448 525 aaPredicted RBP1.25□□□□□ -2.21
CIC1YHR052W SSO1P32867 290 aa1.25□□□□□ -2.21
CIC1YHR052W RPT5P33297 434 aaKnown RBP1.25□□□□□ -2.21
CIC1YHR052W PRM9P39551 298 aa1.25□□□□□ -2.21
CIC1YHR052W MTW1P39731 289 aa1.25□□□□□ -2.21
CIC1YHR052W PRE6P40303 254 aaKnown RBP1.25□□□□□ -2.21
CIC1YHR052W RFC4P40339 323 aaKnown RBP1.25□□□□□ -2.21
CIC1YHR052W FMP33P46998 180 aa1.25□□□□□ -2.21
CIC1YHR052W RPC17P47076 161 aa1.25□□□□□ -2.21
CIC1YHR052W HAM1P47119 197 aaKnown RBP1.25□□□□□ -2.21
CIC1YHR052W NSA1P53136 463 aaPredicted RBP1.25□□□□□ -2.21
CIC1YHR052W ALG11P53954 548 aaKnown RBP1.25□□□□□ -2.21
CIC1YHR052W DAD3P69850 94 aa1.25□□□□□ -2.21
CIC1YHR052W YML108WQ03759 105 aa1.25□□□□□ -2.21
CIC1YHR052W COX20Q04935 205 aa1.25□□□□□ -2.21
CIC1YHR052W YET3Q07451 203 aa1.25□□□□□ -2.21
CIC1YHR052W SDO1Q07953 250 aaKnown RBP1.25□□□□□ -2.21
CIC1YHR052W ATG31Q12421 196 aa1.25□□□□□ -2.21
CIC1YHR052W SNF8Q12483 233 aa1.25□□□□□ -2.21
CIC1YHR052W HIS1P00498 297 aaKnown RBP1.24□□□□□ -2.21
CIC1YHR052W SGA1P08019 549 aa1.24□□□□□ -2.21
CIC1YHR052W NHP6BP11633 99 aaKnown RBP1.24□□□□□ -2.21
CIC1YHR052W COQ1P18900 473 aa1.24□□□□□ -2.21
CIC1YHR052W RPO26P20435 155 aa1.24□□□□□ -2.21
CIC1YHR052W CCA1P21269 546 aa1.24□□□□□ -2.21
CIC1YHR052W PBN1P25580 416 aa1.24□□□□□ -2.21
CIC1YHR052W CSM1P25651 190 aa1.24□□□□□ -2.21
CIC1YHR052W RPS5P26783 225 aaKnown RBP1.24□□□□□ -2.21
CIC1YHR052W FZO1P38297 855 aa1.24□□□□□ -2.21
CIC1YHR052W PRS2P38620 318 aaKnown RBP1.24□□□□□ -2.21
CIC1YHR052W YIL001WP40560 513 aa1.24□□□□□ -2.21
CIC1YHR052W DSN1P40568 576 aa1.24□□□□□ -2.21
CIC1YHR052W RPL10P41805 221 aaKnown RBP1.24□□□□□ -2.21
CIC1YHR052W YGL185CP53100 379 aa1.24□□□□□ -2.21
CIC1YHR052W TIM21P53220 239 aa1.24□□□□□ -2.21
CIC1YHR052W CUS2P53830 285 aaPredicted RBP1.24□□□□□ -2.21
CIC1YHR052W YNL134CP53912 376 aaKnown RBP1.24□□□□□ -2.21
CIC1YHR052W SNZ1Q03148 297 aa1.24□□□□□ -2.21
CIC1YHR052W RSM10Q03201 203 aa1.24□□□□□ -2.21
CIC1YHR052W VBA1Q04301 562 aa1.24□□□□□ -2.21
CIC1YHR052W SFH1Q06168 426 aa1.24□□□□□ -2.21
CIC1YHR052W ATG17Q06410 417 aa1.24□□□□□ -2.21
CIC1YHR052W ABP140Q08641 628 aaKnown RBP1.24□□□□□ -2.21
CIC1YHR052W SME1Q12330 94 aaPredicted RBP1.24□□□□□ -2.21
CIC1YHR052W PST1Q12355 444 aa1.24□□□□□ -2.21
CIC1YHR052W SPT3P06844 337 aa1.23□□□□□ -2.21
CIC1YHR052W RPL27AP0C2H6 136 aaKnown RBP1.23□□□□□ -2.21
CIC1YHR052W RPL27BP0C2H7 136 aaKnown RBP1.23□□□□□ -2.21
CIC1YHR052W YBR121C-AP0C5L4 52 aa1.23□□□□□ -2.21
CIC1YHR052W RPL4AP10664 362 aaKnown RBP1.23□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms