RNA–Protein interactions for RNA: YGL103W

RPL28, Transcript of Ribosomal 60S subunit protein L28, yeastyeast

Gene RPL28, Length 450 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL28YGL103W SMX3P54999 86 aaPredicted RBP4.44□□□□□ -1.7
RPL28YGL103W EGD1Q02642 157 aaKnown RBP4.44□□□□□ -1.7
RPL28YGL103W MRPS17Q03246 237 aaPredicted RBP4.44□□□□□ -1.7
RPL28YGL103W YHM2Q04013 314 aa4.44□□□□□ -1.7
RPL28YGL103W YOL073CQ08232 322 aa4.44□□□□□ -1.7
RPL28YGL103W SRO7Q12038 1033 aa4.44□□□□□ -1.7
RPL28YGL103W YPR063CQ12160 140 aa4.44□□□□□ -1.7
RPL28YGL103W VAM3Q12241 283 aa4.44□□□□□ -1.7
RPL28YGL103W GLO4Q12320 285 aa4.44□□□□□ -1.7
RPL28YGL103W ERP4Q12450 207 aa4.44□□□□□ -1.7
RPL28YGL103W YLR422WQ06409 1932 aa4.44□□□□□ -1.7
RPL28YGL103W ADH3P07246 375 aaKnown RBP4.43□□□□□ -1.7
RPL28YGL103W PAD1P33751 242 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
RPL28YGL103W LYS1P38998 373 aaRIP-Chip data4.43□□□□□ -1.7not detected
RPL28YGL103W PRP39P39682 629 aaKnown RBP4.43□□□□□ -1.7
RPL28YGL103W NOP16P40007 231 aaKnown RBP4.43□□□□□ -1.7
RPL28YGL103W LSM4P40070 187 aaKnown RBP4.43□□□□□ -1.7
RPL28YGL103W YIL067CP40514 678 aa4.43□□□□□ -1.7
RPL28YGL103W DAN1P47178 298 aa4.43□□□□□ -1.7
RPL28YGL103W ACS2P52910 683 aaKnown RBP4.43□□□□□ -1.7
RPL28YGL103W TIM21P53220 239 aa4.43□□□□□ -1.7
RPL28YGL103W YIF1P53845 314 aaKnown RBP4.43□□□□□ -1.7
RPL28YGL103W ALG9P53868 555 aaKnown RBP4.43□□□□□ -1.7
RPL28YGL103W ACS1Q01574 713 aa4.43□□□□□ -1.7
RPL28YGL103W SKO1Q02100 647 aa4.43□□□□□ -1.7
RPL28YGL103W ADD37Q03233 198 aa4.43□□□□□ -1.7
RPL28YGL103W YDR444WQ04093 687 aa4.43□□□□□ -1.7
RPL28YGL103W SMA2Q04658 369 aa4.43□□□□□ -1.7
RPL28YGL103W HOF1Q05080 669 aa4.43□□□□□ -1.7
RPL28YGL103W ERP1Q05359 219 aaKnown RBP4.43□□□□□ -1.7
RPL28YGL103W RTT103Q05543 409 aa4.43□□□□□ -1.7
RPL28YGL103W NNT1Q05874 261 aa4.43□□□□□ -1.7
RPL28YGL103W SYM1Q06563 197 aa4.43□□□□□ -1.7
RPL28YGL103W YPR172WQ06608 200 aa4.43□□□□□ -1.7
RPL28YGL103W SRL2Q12020 392 aa4.43□□□□□ -1.7
RPL28YGL103W DCN1Q12395 269 aa4.43□□□□□ -1.7
RPL28YGL103W NAG1Q8TGN9 163 aa4.43□□□□□ -1.7
RPL28YGL103W CBP6P07253 162 aaPredicted RBP4.42□□□□□ -1.7
RPL28YGL103W GDH1P07262 454 aaKnown RBP4.42□□□□□ -1.7
RPL28YGL103W GAL7P08431 366 aa4.42□□□□□ -1.7
RPL28YGL103W CTA1P15202 515 aa4.42□□□□□ -1.7
RPL28YGL103W POF1P25576 258 aa4.42□□□□□ -1.7
RPL28YGL103W FMP46P36141 133 aaKnown RBP4.42□□□□□ -1.7
RPL28YGL103W SDH4P37298 181 aa4.42□□□□□ -1.7
RPL28YGL103W UMP1P38293 148 aa4.42□□□□□ -1.7
RPL28YGL103W MGE1P38523 228 aa4.42□□□□□ -1.7
RPL28YGL103W YHR180WP38868 163 aa4.42□□□□□ -1.7
RPL28YGL103W YEA6P39953 335 aa4.42□□□□□ -1.7
RPL28YGL103W SLZ1P40167 298 aa4.42□□□□□ -1.7
RPL28YGL103W RPL13BP40212 199 aaKnown RBP4.42□□□□□ -1.7
RPL28YGL103W NIT2P47016 307 aa4.42□□□□□ -1.7
RPL28YGL103W TAX4P47030 604 aa4.42□□□□□ -1.7
RPL28YGL103W COQ5P49017 307 aa4.42□□□□□ -1.7
RPL28YGL103W AVT4P50944 713 aa4.42□□□□□ -1.7
RPL28YGL103W PET191Q02772 108 aa4.42□□□□□ -1.7
RPL28YGL103W TMA23Q03525 211 aa4.42□□□□□ -1.7
RPL28YGL103W GMC1Q04399 608 aa4.42□□□□□ -1.7
RPL28YGL103W YMR253CQ04835 414 aa4.42□□□□□ -1.7
RPL28YGL103W MRX9Q07349 420 aaKnown RBP4.42□□□□□ -1.7
RPL28YGL103W PML1Q07930 204 aaPredicted RBP4.42□□□□□ -1.7
RPL28YGL103W COQ10Q08058 207 aa4.42□□□□□ -1.7
RPL28YGL103W AVO1Q08236 1176 aa4.42□□□□□ -1.7
RPL28YGL103W ENB1Q08299 606 aa4.42□□□□□ -1.7
RPL28YGL103W YOR015WQ12169 119 aa4.42□□□□□ -1.7
RPL28YGL103W YDR262WQ12331 272 aa4.42□□□□□ -1.7
RPL28YGL103W RPL13AQ12690 199 aaPredicted RBP4.42□□□□□ -1.7
RPL28YGL103W COX19Q3E731 98 aa4.42□□□□□ -1.7
RPL28YGL103W MSW1P04803 379 aa4.41□□□□□ -1.7
RPL28YGL103W RPL1AP0CX43 217 aaKnown RBP4.41□□□□□ -1.7
RPL28YGL103W RPL1BP0CX44 217 aaKnown RBP4.41□□□□□ -1.7
RPL28YGL103W FPR1P20081 114 aaKnown RBP4.41□□□□□ -1.7
RPL28YGL103W RPB8P20436 146 aa4.41□□□□□ -1.7
RPL28YGL103W MEK1P24719 497 aaPredicted RBP4.41□□□□□ -1.7
RPL28YGL103W PTP1P25044 335 aa4.41□□□□□ -1.7
RPL28YGL103W YCR101CP25607 182 aa4.41□□□□□ -1.7
RPL28YGL103W LAC1P28496 418 aa4.41□□□□□ -1.7
RPL28YGL103W TRR1P29509 319 aaKnown RBP4.41□□□□□ -1.7
RPL28YGL103W CLB6P32943 380 aa4.41□□□□□ -1.7
RPL28YGL103W NTF2P33331 125 aaKnown RBP4.41□□□□□ -1.7
RPL28YGL103W ARC40P38328 384 aaKnown RBP4.41□□□□□ -1.7
RPL28YGL103W NEM1P38757 446 aa4.41□□□□□ -1.7
RPL28YGL103W SPC25P40014 221 aa4.41□□□□□ -1.7
RPL28YGL103W AIR1P40507 360 aaKnown RBP4.41□□□□□ -1.7
RPL28YGL103W ERJ5P43613 295 aaPredicted RBP4.41□□□□□ -1.7
RPL28YGL103W ASK10P48361 1146 aa4.41□□□□□ -1.7
RPL28YGL103W YGL114WP53134 725 aa4.41□□□□□ -1.7
RPL28YGL103W YAP1802P53309 568 aa4.41□□□□□ -1.7
RPL28YGL103W HOL1P53389 586 aa4.41□□□□□ -1.7
RPL28YGL103W RHO3Q00245 231 aaKnown RBP4.41□□□□□ -1.7
RPL28YGL103W VPS28Q02767 242 aa4.41□□□□□ -1.7
RPL28YGL103W YPL108WQ02872 168 aaPredicted RBP4.41□□□□□ -1.7
RPL28YGL103W HAS1Q03532 505 aaKnown RBP4.41□□□□□ -1.7
RPL28YGL103W EKI1Q03764 534 aa4.41□□□□□ -1.7
RPL28YGL103W SEN15Q04675 128 aa4.41□□□□□ -1.7
RPL28YGL103W BSC6Q08280 497 aa4.41□□□□□ -1.7
RPL28YGL103W YCT1Q12235 531 aa4.41□□□□□ -1.7
RPL28YGL103W UBA3Q99344 299 aa4.41□□□□□ -1.7
RPL28YGL103W TY1A-HP0C2I4 478 aaKnown RBP4.4□□□□□ -1.71
RPL28YGL103W YBR013CP38215 129 aa4.4□□□□□ -1.71
RPL28YGL103W YPT31P38555 223 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 165.5 ms