RNA–Protein interactions for RNA: YFR034C

PHO4, Transcript of Basic helix-loop-helix (bHLH) transcription factor of the myc-family, yeastyeast

Gene PHO4, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO4YFR034C YBL010CP32788 280 aa11.3□□□□□ -0.6
PHO4YFR034C PAN3P36102 679 aaPredicted RBP11.3□□□□□ -0.6
PHO4YFR034C LAP3Q01532 483 aaKnown RBP RIP-Chip data11.3□□□□□ -0.6not detected
PHO4YFR034C PRM15Q03262 622 aa11.3□□□□□ -0.6
PHO4YFR034C YDR387CQ04162 555 aa11.3□□□□□ -0.6
PHO4YFR034C ATG31Q12421 196 aa11.3□□□□□ -0.6
PHO4YFR034C PET20Q99373 253 aa11.3□□□□□ -0.6
PHO4YFR034C SEC16P48415 2195 aaKnown RBP11.3□□□□□ -0.6
PHO4YFR034C SEN1Q00416 2231 aaKnown RBP11.29□□□□□ -0.6
PHO4YFR034C COX5BP00425 151 aa11.29□□□□□ -0.6
PHO4YFR034C CBP6P07253 162 aaPredicted RBP11.29□□□□□ -0.6
PHO4YFR034C YCR016WP25617 290 aaKnown RBP11.29□□□□□ -0.6
PHO4YFR034C MRT4P33201 236 aaKnown RBP11.29□□□□□ -0.6
PHO4YFR034C PPZ2P33329 710 aa11.29□□□□□ -0.6
PHO4YFR034C GEP4P38812 185 aa11.29□□□□□ -0.6
PHO4YFR034C AIM46P38885 310 aa11.29□□□□□ -0.6
PHO4YFR034C ATF1P40353 525 aa11.29□□□□□ -0.6
PHO4YFR034C PHB2P50085 310 aa11.29□□□□□ -0.6
PHO4YFR034C OKP1P53298 406 aa11.29□□□□□ -0.6
PHO4YFR034C MRP51Q02950 344 aa11.29□□□□□ -0.6
PHO4YFR034C COQ11Q05892 277 aa11.29□□□□□ -0.6
PHO4YFR034C ERP4Q12450 207 aa11.29□□□□□ -0.6
PHO4YFR034C PRM4Q12498 284 aa11.29□□□□□ -0.6
PHO4YFR034C YGL194C-AQ2V2P6 80 aa11.29□□□□□ -0.6
PHO4YFR034C RPS16AP0CX51 143 aaKnown RBP11.28□□□□□ -0.6
PHO4YFR034C RPS16BP0CX52 143 aaKnown RBP11.28□□□□□ -0.6
PHO4YFR034C CPR4P25334 318 aa11.28□□□□□ -0.6
PHO4YFR034C RFA3P26755 122 aaKnown RBP11.28□□□□□ -0.6
PHO4YFR034C SWM2P40342 146 aa11.28□□□□□ -0.6
PHO4YFR034C ACS2P52910 683 aaKnown RBP11.28□□□□□ -0.6
PHO4YFR034C YNR048WP53740 393 aa11.28□□□□□ -0.6
PHO4YFR034C SEC62P21825 274 aa11.27□□□□□ -0.61
PHO4YFR034C MGE1P38523 228 aa11.27□□□□□ -0.61
PHO4YFR034C ARO9P38840 513 aaPredicted RBP11.27□□□□□ -0.61
PHO4YFR034C QDR1P40475 563 aa11.27□□□□□ -0.61
PHO4YFR034C AVT4P50944 713 aa11.27□□□□□ -0.61
PHO4YFR034C JAC1P53193 184 aa11.27□□□□□ -0.61
PHO4YFR034C SMX3P54999 86 aaPredicted RBP11.27□□□□□ -0.61
PHO4YFR034C HHT1P61830 136 aa11.27□□□□□ -0.61
PHO4YFR034C YML018CQ03730 393 aa11.27□□□□□ -0.61
PHO4YFR034C SYM1Q06563 197 aa11.27□□□□□ -0.61
PHO4YFR034C YDL180WQ12301 547 aa11.27□□□□□ -0.61
PHO4YFR034C MRPL39P36533 70 aa11.26□□□□□ -0.61
PHO4YFR034C SOK2P53438 785 aaPredicted RBP11.26□□□□□ -0.61
PHO4YFR034C MRPL19P53875 158 aa11.26□□□□□ -0.61
PHO4YFR034C MRX9Q07349 420 aaKnown RBP11.26□□□□□ -0.61
PHO4YFR034C TDH3P00359 332 aaKnown RBP RIP-Chip data11.25□□□□□ -0.61not detected
PHO4YFR034C AAC1P04710 309 aa11.25□□□□□ -0.61
PHO4YFR034C RPL40AP0CH08 128 aaKnown RBP11.25□□□□□ -0.61
PHO4YFR034C RPL40BP0CH09 128 aaKnown RBP11.25□□□□□ -0.61
PHO4YFR034C RPL30P14120 105 aaKnown RBP11.25□□□□□ -0.61
PHO4YFR034C MAG1P22134 296 aaKnown RBP11.25□□□□□ -0.61
PHO4YFR034C RFA1P22336 621 aaKnown RBP11.25□□□□□ -0.61
PHO4YFR034C YCR061WP25639 631 aa11.25□□□□□ -0.61
PHO4YFR034C SUA5P32579 426 aa11.25□□□□□ -0.61
PHO4YFR034C VAM7P32912 316 aa11.25□□□□□ -0.61
PHO4YFR034C BFR1P38934 470 aaKnown RBP RIP-Chip data11.25□□□□□ -0.61not detected
PHO4YFR034C SKP1P52286 194 aa11.25□□□□□ -0.61
PHO4YFR034C NSA1P53136 463 aaPredicted RBP11.25□□□□□ -0.61
PHO4YFR034C TNA1P53322 534 aa11.25□□□□□ -0.61
PHO4YFR034C HRI1Q05905 244 aaKnown RBP11.25□□□□□ -0.61
PHO4YFR034C TFB5Q3E7C1 72 aaPredicted RBP11.25□□□□□ -0.61
PHO4YFR034C SEN2P16658 377 aa11.24□□□□□ -0.61
PHO4YFR034C RPB10P22139 70 aa11.24□□□□□ -0.61
PHO4YFR034C ERG3P32353 365 aa11.24□□□□□ -0.61
PHO4YFR034C KAE1P36132 386 aa11.24□□□□□ -0.61
PHO4YFR034C POP8P38208 133 aa11.24□□□□□ -0.61
PHO4YFR034C PTI1P39927 425 aaPredicted RBP11.24□□□□□ -0.61
PHO4YFR034C YER158CP40095 573 aa11.24□□□□□ -0.61
PHO4YFR034C SEC24P40482 926 aaKnown RBP11.24□□□□□ -0.61
PHO4YFR034C SCY1P53009 804 aa11.24□□□□□ -0.61
PHO4YFR034C DID2P69771 204 aa11.24□□□□□ -0.61
PHO4YFR034C YDR248CQ03786 193 aa11.24□□□□□ -0.61
PHO4YFR034C DLT1Q04216 342 aa11.24□□□□□ -0.61
PHO4YFR034C ERF2Q06551 359 aa11.24□□□□□ -0.61
PHO4YFR034C THI72Q08579 599 aa11.24□□□□□ -0.61
PHO4YFR034C FEX1Q08913 375 aa11.24□□□□□ -0.61
PHO4YFR034C IZH2Q12442 317 aa11.24□□□□□ -0.61
PHO4YFR034C MRPL36P36531 177 aa11.23□□□□□ -0.61
PHO4YFR034C YND1P40009 630 aa11.23□□□□□ -0.61
PHO4YFR034C MOB2P43563 287 aa11.23□□□□□ -0.61
PHO4YFR034C NIF3P53081 288 aa11.23□□□□□ -0.61
PHO4YFR034C ELA1P53861 379 aaPredicted RBP11.23□□□□□ -0.61
PHO4YFR034C USB1Q12208 290 aaKnown RBP11.23□□□□□ -0.61
PHO4YFR034C IFM1P25038 676 aa11.22□□□□□ -0.61
PHO4YFR034C TRR1P29509 319 aaKnown RBP11.22□□□□□ -0.61
PHO4YFR034C AGA2P32781 87 aa11.22□□□□□ -0.61
PHO4YFR034C YMR144WP40214 342 aaKnown RBP11.22□□□□□ -0.61
PHO4YFR034C GNA1P43577 159 aaPredicted RBP11.22□□□□□ -0.61
PHO4YFR034C YNR040WP53736 256 aa11.22□□□□□ -0.61
PHO4YFR034C FEX2Q08991 375 aa11.22□□□□□ -0.61
PHO4YFR034C CDC39P25655 2108 aaKnown RBP11.21□□□□□ -0.61
PHO4YFR034C RPS31P05759 152 aaKnown RBP11.21□□□□□ -0.61
PHO4YFR034C MCM1P11746 286 aa11.21□□□□□ -0.61
PHO4YFR034C DBP2P24783 546 aaKnown RBP11.21□□□□□ -0.61
PHO4YFR034C RPS26AP39938 119 aaKnown RBP11.21□□□□□ -0.61
PHO4YFR034C RPS26BP39939 119 aaKnown RBP11.21□□□□□ -0.61
PHO4YFR034C ALG9P53868 555 aaKnown RBP11.21□□□□□ -0.61
PHO4YFR034C YAP6Q03935 383 aa11.21□□□□□ -0.61
PHO4YFR034C CAB5Q03941 241 aa11.21□□□□□ -0.61
Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms