RNA–Protein interactions for RNA: YER162C

RAD4, Transcript of Protein that recognizes and binds damaged DNA (with Rad23p) during NER, yeast

Gene RAD4, Length 2,265 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD4	YER162C	AIM3	P38266	947 aa	Known RBP	3.17	□□□□□ -1.9
RAD4	YER162C	YHL037C	P38733	133 aa		3.17	□□□□□ -1.9
RAD4	YER162C	RMD6	P39975	231 aa		3.17	□□□□□ -1.9
RAD4	YER162C	PMT6	P42934	759 aa		3.17	□□□□□ -1.9
RAD4	YER162C	AIM24	P47127	394 aa		3.17	□□□□□ -1.9
RAD4	YER162C	LYS20	P48570	428 aa	Known RBP	3.17	□□□□□ -1.9
RAD4	YER162C	TPS1	Q00764	495 aa	Known RBP	3.17	□□□□□ -1.9
RAD4	YER162C	NUP49	Q02199	472 aa		3.17	□□□□□ -1.9
RAD4	YER162C	CWC27	Q02770	301 aa		3.17	□□□□□ -1.9
RAD4	YER162C	AIM34	Q03673	198 aa		3.17	□□□□□ -1.9
RAD4	YER162C	SMP3	Q04174	516 aa		3.17	□□□□□ -1.9
RAD4	YER162C	YMR087W	Q04299	284 aa		3.17	□□□□□ -1.9
RAD4	YER162C	ECI1	Q05871	280 aa		3.17	□□□□□ -1.9
RAD4	YER162C	HRI1	Q05905	244 aa	Known RBP	3.17	□□□□□ -1.9
RAD4	YER162C	PBP4	Q07362	185 aa	Known RBP	3.17	□□□□□ -1.9
RAD4	YER162C	YCL001W-B	Q96VH2	84 aa		3.17	□□□□□ -1.9
RAD4	YER162C	CDC28	P00546	298 aa	Known RBP	3.17	□□□□□ -1.9
RAD4	YER162C	MGT1	P26188	188 aa		3.17	□□□□□ -1.9
RAD4	YER162C	YSC84	P32793	468 aa		3.17	□□□□□ -1.9
RAD4	YER162C	PTM1	P32857	523 aa		3.17	□□□□□ -1.9
RAD4	YER162C	GOS1	P38736	223 aa		3.17	□□□□□ -1.9
RAD4	YER162C	RRP4	P38792	359 aa	Known RBP	3.17	□□□□□ -1.9
RAD4	YER162C	COG5	P53951	403 aa		3.17	□□□□□ -1.9
RAD4	YER162C	RUB1	Q03919	77 aa		3.17	□□□□□ -1.9
RAD4	YER162C	YDL086W	Q07505	273 aa		3.17	□□□□□ -1.9
RAD4	YER162C	MDN1	Q12019	4910 aa	Known RBP	3.16	□□□□□ -1.9
RAD4	YER162C	RPL25	P04456	142 aa	Known RBP	3.16	□□□□□ -1.9
RAD4	YER162C	RHO2	P06781	192 aa		3.16	□□□□□ -1.9
RAD4	YER162C	STE7	P06784	515 aa		3.16	□□□□□ -1.9
RAD4	YER162C	YSF3	P0C074	85 aa	Predicted RBP	3.16	□□□□□ -1.9
RAD4	YER162C	GAR1	P28007	205 aa	Known RBP	3.16	□□□□□ -1.9
RAD4	YER162C	RRG9	P40156	214 aa		3.16	□□□□□ -1.9
RAD4	YER162C	LYS12	P40495	371 aa	Known RBP	3.16	□□□□□ -1.9
RAD4	YER162C	SYG1	P40528	902 aa		3.16	□□□□□ -1.9
RAD4	YER162C	TRS85	P46944	698 aa		3.16	□□□□□ -1.9
RAD4	YER162C	YJL016W	P47072	561 aa		3.16	□□□□□ -1.9
RAD4	YER162C	BIO4	P53630	237 aa		3.16	□□□□□ -1.9
RAD4	YER162C	DLT1	Q04216	342 aa		3.16	□□□□□ -1.9
RAD4	YER162C	YLR446W	Q06204	433 aa		3.16	□□□□□ -1.9
RAD4	YER162C	YNG1	Q08465	219 aa		3.16	□□□□□ -1.9
RAD4	YER162C	YPL245W	Q12179	454 aa	Known RBP	3.16	□□□□□ -1.9
RAD4	YER162C	FYV7	Q12247	151 aa		3.16	□□□□□ -1.9
RAD4	YER162C	MHT1	Q12525	324 aa		3.16	□□□□□ -1.9
RAD4	YER162C	CHO1	P08456	276 aa		3.16	□□□□□ -1.9
RAD4	YER162C	YFR010W-A	P0C5N0	62 aa		3.16	□□□□□ -1.9
RAD4	YER162C	NAM2	P11325	894 aa		3.16	□□□□□ -1.9
RAD4	YER162C	ERD1	P16151	362 aa		3.16	□□□□□ -1.9
RAD4	YER162C	SEC22	P22214	214 aa		3.16	□□□□□ -1.9
RAD4	YER162C	SEC14	P24280	304 aa	Known RBP	3.16	□□□□□ -1.9
RAD4	YER162C	SLM5	P25345	492 aa	Known RBP	3.16	□□□□□ -1.9
RAD4	YER162C	ELO2	P25358	347 aa		3.16	□□□□□ -1.9
RAD4	YER162C	PPZ2	P33329	710 aa		3.16	□□□□□ -1.9
RAD4	YER162C	BNA4	P38169	460 aa		3.16	□□□□□ -1.9
RAD4	YER162C	FMP23	P38231	175 aa		3.16	□□□□□ -1.9
RAD4	YER162C	OXA1	P39952	402 aa		3.16	□□□□□ -1.9
RAD4	YER162C	GAT2	P40209	560 aa		3.16	□□□□□ -1.9
RAD4	YER162C	FMP32	P43557	207 aa		3.16	□□□□□ -1.9
RAD4	YER162C	ATG27	P46989	271 aa		3.16	□□□□□ -1.9
RAD4	YER162C	PGU1	P47180	361 aa		3.16	□□□□□ -1.9
RAD4	YER162C	MGA1	P53050	456 aa		3.16	□□□□□ -1.9
RAD4	YER162C	MMS2	P53152	137 aa		3.16	□□□□□ -1.9
RAD4	YER162C	COS6	P53344	381 aa		3.16	□□□□□ -1.9
RAD4	YER162C	MKC7	P53379	596 aa		3.16	□□□□□ -1.9
RAD4	YER162C	ASI2	P53895	289 aa		3.16	□□□□□ -1.9
RAD4	YER162C	RSM23	Q01163	450 aa		3.16	□□□□□ -1.9
RAD4	YER162C	ARC18	Q05933	178 aa	Known RBP	3.16	□□□□□ -1.9
RAD4	YER162C	RGC1	Q06108	1083 aa	Known RBP	3.16	□□□□□ -1.9
RAD4	YER162C	FRQ1	Q06389	190 aa		3.16	□□□□□ -1.9
RAD4	YER162C	TPO3	Q06451	622 aa		3.16	□□□□□ -1.9
RAD4	YER162C	ASR1	Q06834	288 aa		3.16	□□□□□ -1.9
RAD4	YER162C	USB1	Q12208	290 aa	Known RBP	3.16	□□□□□ -1.9
RAD4	YER162C	IES3	Q12345	250 aa		3.16	□□□□□ -1.9
RAD4	YER162C	YPR064W	Q12492	139 aa		3.16	□□□□□ -1.9
RAD4	YER162C	SLO1	Q3E784	85 aa		3.16	□□□□□ -1.9
RAD4	YER162C	CYS4	P32582	507 aa	Known RBP	3.15	□□□□□ -1.91
RAD4	YER162C	SWD2	P36104	329 aa	Predicted RBP	3.15	□□□□□ -1.91
RAD4	YER162C	CUE1	P38428	203 aa		3.15	□□□□□ -1.91
RAD4	YER162C	PRS3	P38689	320 aa	Known RBP	3.15	□□□□□ -1.91
RAD4	YER162C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	not detected
RAD4	YER162C	DDI1	P40087	428 aa		3.15	□□□□□ -1.91
RAD4	YER162C	COG3	P40094	801 aa		3.15	□□□□□ -1.91
RAD4	YER162C	AIR1	P40507	360 aa	Known RBP	3.15	□□□□□ -1.91
RAD4	YER162C	SOK2	P53438	785 aa	Predicted RBP	3.15	□□□□□ -1.91
RAD4	YER162C	RNY1	Q02933	434 aa	Known RBP	3.15	□□□□□ -1.91
RAD4	YER162C	API2	Q04413	109 aa		3.15	□□□□□ -1.91
RAD4	YER162C	DPP1	Q05521	289 aa		3.15	□□□□□ -1.91
RAD4	YER162C	YLR177W	Q06251	628 aa		3.15	□□□□□ -1.91
RAD4	YER162C	HNT3	Q08702	217 aa		3.15	□□□□□ -1.91
RAD4	YER162C	YBR255C-A	Q3E776	120 aa		3.15	□□□□□ -1.91
RAD4	YER162C	TAD3	Q9URQ3	322 aa		3.15	□□□□□ -1.91
RAD4	YER162C	RPP1A	P05318	106 aa	Predicted RBP	3.14	□□□□□ -1.91
RAD4	YER162C	OPI3	P05375	206 aa		3.14	□□□□□ -1.91
RAD4	YER162C	TFC1	P32367	649 aa		3.14	□□□□□ -1.91
RAD4	YER162C	NUP2	P32499	720 aa		3.14	□□□□□ -1.91
RAD4	YER162C	VAM7	P32912	316 aa		3.14	□□□□□ -1.91
RAD4	YER162C	SOR1	P35497	357 aa	Known RBP	3.14	□□□□□ -1.91
RAD4	YER162C	NNK1	P36003	928 aa		3.14	□□□□□ -1.91
RAD4	YER162C	CBP4	P37267	147 aa		3.14	□□□□□ -1.91
RAD4	YER162C	RPL32	P38061	130 aa	Known RBP	3.14	□□□□□ -1.91
RAD4	YER162C	MBB1	P39534	108 aa		3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms