RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM4, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM4YER112W RRP40Q08285 240 aaKnown RBP2.25□□□□□ -2.05
LSM4YER112W YOR283WQ12040 230 aaKnown RBP2.25□□□□□ -2.05
LSM4YER112W YOL107WQ12239 342 aa2.25□□□□□ -2.05
LSM4YER112W YKR104WP0CE69 306 aa2.24□□□□□ -2.05
LSM4YER112W SCO1P23833 295 aa2.24□□□□□ -2.05
LSM4YER112W HOM6P31116 359 aaKnown RBP2.24□□□□□ -2.05
LSM4YER112W JEN1P36035 616 aa2.24□□□□□ -2.05
LSM4YER112W YGP1P38616 354 aaKnown RBP2.24□□□□□ -2.05
LSM4YER112W BIG1P38813 335 aa2.24□□□□□ -2.05
LSM4YER112W SMB1P40018 196 aaKnown RBP2.24□□□□□ -2.05
LSM4YER112W USE1P53146 245 aa2.24□□□□□ -2.05
LSM4YER112W MRH4P53166 561 aa2.24□□□□□ -2.05
LSM4YER112W SYC1Q08553 188 aaPredicted RBP2.24□□□□□ -2.05
LSM4YER112W CSM4Q08955 156 aa2.24□□□□□ -2.05
LSM4YER112W YPR011CQ12251 326 aa2.24□□□□□ -2.05
LSM4YER112W SEC22P22214 214 aa2.23□□□□□ -2.05
LSM4YER112W SGE1P33335 543 aa2.23□□□□□ -2.05
LSM4YER112W MRPL39P36533 70 aa2.23□□□□□ -2.05
LSM4YER112W YHB1P39676 399 aaKnown RBP2.23□□□□□ -2.05
LSM4YER112W YJR146WP47174 117 aa2.23□□□□□ -2.05
LSM4YER112W SLM2P53955 656 aa2.23□□□□□ -2.05
LSM4YER112W CGI121Q03705 181 aaKnown RBP2.23□□□□□ -2.05
LSM4YER112W RRT8Q08219 342 aa2.23□□□□□ -2.05
LSM4YER112W MED4Q12343 284 aa2.23□□□□□ -2.05
LSM4YER112W SNU23Q12368 194 aaPredicted RBP2.23□□□□□ -2.05
LSM4YER112W EMP46Q12396 444 aa2.23□□□□□ -2.05
LSM4YER112W SAS5Q99314 248 aa2.23□□□□□ -2.05
LSM4YER112W SGA1P08019 549 aa2.22□□□□□ -2.05
LSM4YER112W BNA6P43619 295 aa2.22□□□□□ -2.05
LSM4YER112W OST2P46964 130 aa2.22□□□□□ -2.05
LSM4YER112W COS6P53344 381 aa2.22□□□□□ -2.05
LSM4YER112W MRPL50P53724 139 aa2.22□□□□□ -2.05
LSM4YER112W SPG4Q04438 115 aa2.22□□□□□ -2.05
LSM4YER112W YLR173WQ06247 608 aa2.22□□□□□ -2.05
LSM4YER112W COQ10Q08058 207 aa2.22□□□□□ -2.05
LSM4YER112W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
LSM4YER112W COS8P38723 381 aa2.21□□□□□ -2.06
LSM4YER112W THO1P40040 218 aaKnown RBP2.21□□□□□ -2.06
LSM4YER112W YER189WP40104 122 aa2.21□□□□□ -2.06
LSM4YER112W SNZ3P43545 298 aa2.21□□□□□ -2.06
LSM4YER112W CAB4P53332 305 aa2.21□□□□□ -2.06
LSM4YER112W RRS1Q08746 203 aaKnown RBP2.21□□□□□ -2.06
LSM4YER112W EMC6Q12431 108 aa2.21□□□□□ -2.06
LSM4YER112W CCA1P21269 546 aa2.2□□□□□ -2.06
LSM4YER112W SCM4P32564 187 aa2.2□□□□□ -2.06
LSM4YER112W RCN1P36054 211 aa2.2□□□□□ -2.06
LSM4YER112W GOS1P38736 223 aa2.2□□□□□ -2.06
LSM4YER112W GLG2P47011 380 aa2.2□□□□□ -2.06
LSM4YER112W RHO3Q00245 231 aaKnown RBP2.2□□□□□ -2.06
LSM4YER112W MSH5Q12175 901 aa2.2□□□□□ -2.06
LSM4YER112W YCT1Q12235 531 aa2.2□□□□□ -2.06
LSM4YER112W BBP1Q12365 385 aa2.2□□□□□ -2.06
LSM4YER112W YLR462WO13556 202 aa2.19□□□□□ -2.06
LSM4YER112W BFR1P38934 470 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06 RIP-Chip
LSM4YER112W YEL075CP39972 122 aa2.19□□□□□ -2.06
LSM4YER112W ARC15P40518 154 aaRIP-Chip data2.19□□□□□ -2.06not detected
LSM4YER112W CTF19Q02732 369 aa2.19□□□□□ -2.06
LSM4YER112W RSM10Q03201 203 aa2.19□□□□□ -2.06
LSM4YER112W YLR179CQ06252 201 aaKnown RBP2.19□□□□□ -2.06
LSM4YER112W YOR029WQ12243 111 aa2.19□□□□□ -2.06
LSM4YER112W SWI1P09547 1314 aa2.18□□□□□ -2.06
LSM4YER112W PUT1P09368 476 aa2.18□□□□□ -2.06
LSM4YER112W YGL034CP53186 121 aa2.18□□□□□ -2.06
LSM4YER112W SNZ2P53824 298 aa2.18□□□□□ -2.06
LSM4YER112W YNL134CP53912 376 aaKnown RBP2.18□□□□□ -2.06
LSM4YER112W RRN5Q02983 363 aa2.18□□□□□ -2.06
LSM4YER112W KRE28Q04431 385 aa2.18□□□□□ -2.06
LSM4YER112W FAR8Q05040 523 aa2.18□□□□□ -2.06
LSM4YER112W PAM18Q07914 168 aa2.18□□□□□ -2.06
LSM4YER112W EHD3P28817 500 aa2.17□□□□□ -2.06
LSM4YER112W RPT5P33297 434 aaKnown RBP2.17□□□□□ -2.06
LSM4YER112W GRE3P38715 327 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
LSM4YER112W YHR127WP38833 243 aaKnown RBP2.17□□□□□ -2.06
LSM4YER112W SNX4P47057 423 aa2.17□□□□□ -2.06
LSM4YER112W RMR1P53060 241 aa2.17□□□□□ -2.06
LSM4YER112W YGR026WP53217 278 aa2.17□□□□□ -2.06
LSM4YER112W SRL4Q03085 281 aa2.17□□□□□ -2.06
LSM4YER112W YMR279CQ03263 540 aa2.17□□□□□ -2.06
LSM4YER112W YOR186WQ08560 144 aa2.17□□□□□ -2.06
LSM4YER112W MHT1Q12525 324 aa2.17□□□□□ -2.06
LSM4YER112W ADH3P07246 375 aaKnown RBP2.16□□□□□ -2.06
LSM4YER112W YOR062CP36025 268 aa2.16□□□□□ -2.06
LSM4YER112W YBR096WP38256 230 aa2.16□□□□□ -2.06
LSM4YER112W FMC1P40491 155 aa2.16□□□□□ -2.06
LSM4YER112W ERG24P32462 438 aaKnown RBP2.15□□□□□ -2.07
LSM4YER112W NRG2P38082 220 aa2.15□□□□□ -2.07
LSM4YER112W YJR079WP47126 109 aa2.15□□□□□ -2.07
LSM4YER112W JHD2P47156 728 aaPredicted RBP2.15□□□□□ -2.07
LSM4YER112W DAN1P47178 298 aa2.15□□□□□ -2.07
LSM4YER112W PRM15Q03262 622 aa2.15□□□□□ -2.07
LSM4YER112W ATG31Q12421 196 aa2.15□□□□□ -2.07
LSM4YER112W Q0255P03881 472 aa2.14□□□□□ -2.07
LSM4YER112W YHR125WP38831 101 aa2.14□□□□□ -2.07
LSM4YER112W YMR144WP40214 342 aaKnown RBP2.14□□□□□ -2.07
LSM4YER112W HAM1P47119 197 aaKnown RBP2.14□□□□□ -2.07
LSM4YER112W HOC1P47124 396 aa2.14□□□□□ -2.07
LSM4YER112W YGL159WP53110 370 aa2.14□□□□□ -2.07
LSM4YER112W GTR2P53290 341 aa2.14□□□□□ -2.07
LSM4YER112W PET117Q02771 107 aa2.14□□□□□ -2.07
LSM4YER112W INM2Q05533 292 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 39.4 ms