RNA–Protein interactions for RNA: YDR489W

SLD5, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeastyeast

Gene SLD5, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLD5YDR489W MIX17Q03667 156 aa2.03□□□□□ -2.08
SLD5YDR489W MYO5Q04439 1219 aaKnown RBP2.03□□□□□ -2.08
SLD5YDR489W VPS68Q12016 184 aa2.03□□□□□ -2.08
SLD5YDR489W MED4Q12343 284 aa2.03□□□□□ -2.08
SLD5YDR489W TCP1P12612 559 aaKnown RBP2.02□□□□□ -2.09
SLD5YDR489W RPS5P26783 225 aaKnown RBP2.02□□□□□ -2.09
SLD5YDR489W RNP1P32385 249 aa2.02□□□□□ -2.09
SLD5YDR489W YER188WP40103 239 aa2.02□□□□□ -2.09
SLD5YDR489W FMC1P40491 155 aa2.02□□□□□ -2.09
SLD5YDR489W SNZ3P43545 298 aa2.02□□□□□ -2.09
SLD5YDR489W GON7P46984 123 aa2.02□□□□□ -2.09
SLD5YDR489W YJL016WP47072 561 aa2.02□□□□□ -2.09
SLD5YDR489W USE1P53146 245 aa2.02□□□□□ -2.09
SLD5YDR489W YPR098CQ06089 161 aa2.02□□□□□ -2.09
SLD5YDR489W YPR147CQ06522 304 aaKnown RBP2.02□□□□□ -2.09
SLD5YDR489W RRP40Q08285 240 aaKnown RBP2.02□□□□□ -2.09
SLD5YDR489W SYC1Q08553 188 aaPredicted RBP2.02□□□□□ -2.09
SLD5YDR489W YCT1Q12235 531 aa2.02□□□□□ -2.09
SLD5YDR489W YPR011CQ12251 326 aa2.02□□□□□ -2.09
SLD5YDR489W SEC22P22214 214 aa2.01□□□□□ -2.09
SLD5YDR489W SCO1P23833 295 aa2.01□□□□□ -2.09
SLD5YDR489W CLB6P32943 380 aa2.01□□□□□ -2.09
SLD5YDR489W MAL32P38158 584 aa2.01□□□□□ -2.09
SLD5YDR489W MED6P38782 295 aa2.01□□□□□ -2.09
SLD5YDR489W SPT8P38915 602 aa2.01□□□□□ -2.09
SLD5YDR489W BFR1P38934 470 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09 RIP-Chip
SLD5YDR489W YJR079WP47126 109 aa2.01□□□□□ -2.09
SLD5YDR489W MAL12P53341 584 aa2.01□□□□□ -2.09
SLD5YDR489W YNL046WP53956 172 aa2.01□□□□□ -2.09
SLD5YDR489W YDR209CQ03480 137 aa2.01□□□□□ -2.09
SLD5YDR489W KRE28Q04431 385 aa2.01□□□□□ -2.09
SLD5YDR489W SPG4Q04438 115 aa2.01□□□□□ -2.09
SLD5YDR489W YDR124WQ04608 324 aa2.01□□□□□ -2.09
SLD5YDR489W YLR283WQ05867 314 aa2.01□□□□□ -2.09
SLD5YDR489W PAM18Q07914 168 aa2.01□□□□□ -2.09
SLD5YDR489W TY3A-GQ12173 290 aa2.01□□□□□ -2.09
SLD5YDR489W YBL008W-AQ3E821 79 aa2.01□□□□□ -2.09
SLD5YDR489W TY3A-IQ99219 290 aa2.01□□□□□ -2.09
SLD5YDR489W YPL229WQ99395 206 aa2.01□□□□□ -2.09
SLD5YDR489W SWI1P09547 1314 aa2□□□□□ -2.09
SLD5YDR489W YHB1P39676 399 aaKnown RBP2□□□□□ -2.09
SLD5YDR489W SNZ2P53824 298 aa2□□□□□ -2.09
SLD5YDR489W PEX12Q04370 399 aa2□□□□□ -2.09
SLD5YDR489W YOR186WQ08560 144 aa2□□□□□ -2.09
SLD5YDR489W YCR102CP25608 368 aa1.99□□□□□ -2.09
SLD5YDR489W FZO1P38297 855 aa1.99□□□□□ -2.09
SLD5YDR489W YER189WP40104 122 aa1.99□□□□□ -2.09
SLD5YDR489W MRPL49P40858 161 aaPredicted RBP1.99□□□□□ -2.09
SLD5YDR489W SMD3P43321 101 aaKnown RBP1.99□□□□□ -2.09
SLD5YDR489W NUP84P52891 726 aa1.99□□□□□ -2.09
SLD5YDR489W PET117Q02771 107 aa1.99□□□□□ -2.09
SLD5YDR489W GOT1Q03554 138 aa1.99□□□□□ -2.09
SLD5YDR489W GRH1Q04410 372 aaKnown RBP1.99□□□□□ -2.09
SLD5YDR489W SEI1Q06058 285 aa1.99□□□□□ -2.09
SLD5YDR489W PST1Q12355 444 aa1.99□□□□□ -2.09
SLD5YDR489W ERD2P18414 219 aa1.98□□□□□ -2.09
SLD5YDR489W LDB7P38210 180 aa1.98□□□□□ -2.09
SLD5YDR489W OST2P46964 130 aa1.98□□□□□ -2.09
SLD5YDR489W COS6P53344 381 aa1.98□□□□□ -2.09
SLD5YDR489W CGI121Q03705 181 aaKnown RBP1.98□□□□□ -2.09
SLD5YDR489W YLR462WO13556 202 aa1.97□□□□□ -2.09
SLD5YDR489W SGE1P33335 543 aa1.97□□□□□ -2.09
SLD5YDR489W RCN1P36054 211 aa1.97□□□□□ -2.09
SLD5YDR489W YHR127WP38833 243 aaKnown RBP1.97□□□□□ -2.09
SLD5YDR489W YEL075CP39972 122 aa1.97□□□□□ -2.09
SLD5YDR489W YJR149WP47177 404 aa1.97□□□□□ -2.09
SLD5YDR489W MRPL50P53724 139 aa1.97□□□□□ -2.09
SLD5YDR489W RHO3Q00245 231 aaKnown RBP1.97□□□□□ -2.09
SLD5YDR489W RGM1Q00453 211 aa1.97□□□□□ -2.09
SLD5YDR489W FAR8Q05040 523 aa1.97□□□□□ -2.09
SLD5YDR489W SPO77Q06134 477 aa1.97□□□□□ -2.09
SLD5YDR489W YLR179CQ06252 201 aaKnown RBP1.97□□□□□ -2.09
SLD5YDR489W YPR172WQ06608 200 aa1.97□□□□□ -2.09
SLD5YDR489W SLD7Q08457 257 aa1.97□□□□□ -2.09
SLD5YDR489W SNU23Q12368 194 aaPredicted RBP1.97□□□□□ -2.09
SLD5YDR489W COX5AP00424 153 aa1.96□□□□□ -2.1
SLD5YDR489W MATALPHA1P0CY06 175 aa1.96□□□□□ -2.1
SLD5YDR489W HMLALPHA1P0CY07 175 aa1.96□□□□□ -2.1
SLD5YDR489W CCA1P21269 546 aa1.96□□□□□ -2.1
SLD5YDR489W YCR016WP25617 290 aaKnown RBP1.96□□□□□ -2.1
SLD5YDR489W MRPL39P36533 70 aa1.96□□□□□ -2.1
SLD5YDR489W COS8P38723 381 aa1.96□□□□□ -2.1
SLD5YDR489W YHL026CP38740 315 aa1.96□□□□□ -2.1
SLD5YDR489W CTR2P38865 189 aa1.96□□□□□ -2.1
SLD5YDR489W RPC17P47076 161 aa1.96□□□□□ -2.1
SLD5YDR489W RDS3Q06835 107 aaPredicted RBP1.96□□□□□ -2.1
SLD5YDR489W YLR030WQ07967 263 aa1.96□□□□□ -2.1
SLD5YDR489W RRS1Q08746 203 aaKnown RBP1.96□□□□□ -2.1
SLD5YDR489W CFT1Q06632 1357 aaKnown RBP1.96□□□□□ -2.1
SLD5YDR489W YHR139C-AO13536 103 aa1.95□□□□□ -2.1
SLD5YDR489W SNA3P14359 133 aa1.95□□□□□ -2.1
SLD5YDR489W MRPL25P23369 157 aa1.95□□□□□ -2.1
SLD5YDR489W SCM4P32564 187 aa1.95□□□□□ -2.1
SLD5YDR489W MSN4P33749 630 aa1.95□□□□□ -2.1
SLD5YDR489W MSA2P36157 363 aa1.95□□□□□ -2.1
SLD5YDR489W YER085CP40058 173 aa1.95□□□□□ -2.1
SLD5YDR489W RPA43P46669 326 aa1.95□□□□□ -2.1
SLD5YDR489W LIA1P47120 325 aaKnown RBP1.95□□□□□ -2.1
SLD5YDR489W YGL159WP53110 370 aa1.95□□□□□ -2.1
SLD5YDR489W NOP13P53883 403 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
Retrieved 100 of 5,963 RNA–protein pairs in 99.5 ms