RNA–Protein interactions for RNA: YDR354W

TRP4, Transcript of Anthranilate phosphoribosyl transferase, yeast

Gene TRP4, Length 1,143 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP4	YDR354W	MAS2	P11914	482 aa		3.38	□□□□□ -1.87
TRP4	YDR354W	HPR1	P17629	752 aa	Known RBP	3.38	□□□□□ -1.87
TRP4	YDR354W	MEI4	P29467	408 aa		3.38	□□□□□ -1.87
TRP4	YDR354W	FUN26	P31381	517 aa		3.38	□□□□□ -1.87
TRP4	YDR354W	TFC1	P32367	649 aa		3.38	□□□□□ -1.87
TRP4	YDR354W	SPS19	P32573	292 aa	Known RBP	3.38	□□□□□ -1.87
TRP4	YDR354W	MCR1	P36060	302 aa	Known RBP	3.38	□□□□□ -1.87
TRP4	YDR354W	MRPL27	P36526	146 aa	Predicted RBP	3.38	□□□□□ -1.87
TRP4	YDR354W	FIG1	P38224	298 aa		3.38	□□□□□ -1.87
TRP4	YDR354W	MIC12	P38341	106 aa		3.38	□□□□□ -1.87
TRP4	YDR354W	GEP4	P38812	185 aa		3.38	□□□□□ -1.87
TRP4	YDR354W	FRT2	P39734	528 aa		3.38	□□□□□ -1.87
TRP4	YDR354W	EAF6	P47128	113 aa		3.38	□□□□□ -1.87
TRP4	YDR354W	GET1	P53192	235 aa		3.38	□□□□□ -1.87
TRP4	YDR354W	TRM112	P53738	135 aa	Predicted RBP	3.38	□□□□□ -1.87
TRP4	YDR354W	ALG11	P53954	548 aa	Known RBP	3.38	□□□□□ -1.87
TRP4	YDR354W	TPS1	Q00764	495 aa	Known RBP	3.38	□□□□□ -1.87
TRP4	YDR354W	DCR2	Q05924	578 aa		3.38	□□□□□ -1.87
TRP4	YDR354W	BUR2	Q05949	395 aa		3.38	□□□□□ -1.87
TRP4	YDR354W	SLD7	Q08457	257 aa		3.38	□□□□□ -1.87
TRP4	YDR354W	SIA1	Q12212	622 aa		3.38	□□□□□ -1.87
TRP4	YDR354W	HTB1	P02293	131 aa	Known RBP	3.37	□□□□□ -1.87
TRP4	YDR354W	HTB2	P02294	131 aa		3.37	□□□□□ -1.87
TRP4	YDR354W	YBR121C-A	P0C5L4	52 aa		3.37	□□□□□ -1.87
TRP4	YDR354W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	3.37	□□□□□ -1.87	not detected
TRP4	YDR354W	RPS5	P26783	225 aa	Known RBP	3.37	□□□□□ -1.87
TRP4	YDR354W	ADE1	P27616	306 aa		3.37	□□□□□ -1.87
TRP4	YDR354W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.37	□□□□□ -1.87	not detected
TRP4	YDR354W	MSK1	P32048	576 aa		3.37	□□□□□ -1.87
TRP4	YDR354W	SPO23	P33757	523 aa		3.37	□□□□□ -1.87
TRP4	YDR354W	TIR2	P33890	251 aa		3.37	□□□□□ -1.87
TRP4	YDR354W	UTP11	P34247	250 aa	Predicted RBP	3.37	□□□□□ -1.87
TRP4	YDR354W	DTR1	P38125	572 aa		3.37	□□□□□ -1.87
TRP4	YDR354W	ATG12	P38316	186 aa		3.37	□□□□□ -1.87
TRP4	YDR354W	YIL054W	P40524	105 aa		3.37	□□□□□ -1.87
TRP4	YDR354W	YGR168C	P53293	376 aa		3.37	□□□□□ -1.87
TRP4	YDR354W	TMA20	P89886	181 aa	Predicted RBP	3.37	□□□□□ -1.87
TRP4	YDR354W	TRM44	Q02648	567 aa	Known RBP	3.37	□□□□□ -1.87
TRP4	YDR354W	CTF19	Q02732	369 aa		3.37	□□□□□ -1.87
TRP4	YDR354W	CDC123	Q05791	360 aa		3.37	□□□□□ -1.87
TRP4	YDR354W	YHC1	Q05900	231 aa	Known RBP	3.37	□□□□□ -1.87
TRP4	YDR354W	RPN8	Q08723	338 aa	Known RBP	3.37	□□□□□ -1.87
TRP4	YDR354W	DDC1	Q08949	612 aa		3.37	□□□□□ -1.87
TRP4	YDR354W	SAM4	Q08985	325 aa	Known RBP	3.37	□□□□□ -1.87
TRP4	YDR354W	MSH5	Q12175	901 aa		3.37	□□□□□ -1.87
TRP4	YDR354W	EMP46	Q12396	444 aa		3.37	□□□□□ -1.87
TRP4	YDR354W	FSH3	Q99369	266 aa		3.37	□□□□□ -1.87
TRP4	YDR354W	IZH4	Q99393	312 aa		3.37	□□□□□ -1.87
TRP4	YDR354W	RPL12A	P0CX53	165 aa	Known RBP	3.36	□□□□□ -1.87
TRP4	YDR354W	RPL12B	P0CX54	165 aa		3.36	□□□□□ -1.87
TRP4	YDR354W	GPA2	P10823	449 aa		3.36	□□□□□ -1.87
TRP4	YDR354W	SNF4	P12904	322 aa		3.36	□□□□□ -1.87
TRP4	YDR354W	URA10	P30402	227 aa		3.36	□□□□□ -1.87
TRP4	YDR354W	ITR2	P30606	609 aa		3.36	□□□□□ -1.87
TRP4	YDR354W	VMA5	P31412	392 aa	Known RBP	3.36	□□□□□ -1.87
TRP4	YDR354W	PTC1	P35182	281 aa		3.36	□□□□□ -1.87
TRP4	YDR354W	CAF4	P36130	643 aa		3.36	□□□□□ -1.87
TRP4	YDR354W	YBR285W	P38354	144 aa		3.36	□□□□□ -1.87
TRP4	YDR354W	SRP14	P38985	146 aa		3.36	□□□□□ -1.87
TRP4	YDR354W	VAB2	P40003	282 aa		3.36	□□□□□ -1.87
TRP4	YDR354W	BTT1	P40314	149 aa	Predicted RBP	3.36	□□□□□ -1.87
TRP4	YDR354W	ICE2	P40499	491 aa		3.36	□□□□□ -1.87
TRP4	YDR354W	CIN5	P40917	295 aa		3.36	□□□□□ -1.87
TRP4	YDR354W	AGP3	P43548	558 aa		3.36	□□□□□ -1.87
TRP4	YDR354W	COX16	P47081	118 aa		3.36	□□□□□ -1.87
TRP4	YDR354W	AIF1	P52923	378 aa		3.36	□□□□□ -1.87
TRP4	YDR354W	YGR042W	P53227	271 aa		3.36	□□□□□ -1.87
TRP4	YDR354W	SED5	Q01590	340 aa		3.36	□□□□□ -1.87
TRP4	YDR354W	GPI17	Q04080	534 aa		3.36	□□□□□ -1.87
TRP4	YDR354W	MCH1	Q07376	486 aa		3.36	□□□□□ -1.87
TRP4	YDR354W	ERP3	Q12403	225 aa		3.36	□□□□□ -1.87
TRP4	YDR354W	PCL9	Q12477	304 aa		3.36	□□□□□ -1.87
TRP4	YDR354W	HIS1	P00498	297 aa	Known RBP	3.35	□□□□□ -1.87
TRP4	YDR354W	ATP6	P00854	259 aa		3.35	□□□□□ -1.87
TRP4	YDR354W	ASP3-2	P0CX77	362 aa		3.35	□□□□□ -1.87
TRP4	YDR354W	ASP3-3	P0CX78	362 aa		3.35	□□□□□ -1.87
TRP4	YDR354W	ASP3-4	P0CX79	362 aa		3.35	□□□□□ -1.87
TRP4	YDR354W	ASP3-1	P0CZ17	362 aa		3.35	□□□□□ -1.87
TRP4	YDR354W	YMR31	P19955	123 aa		3.35	□□□□□ -1.87
TRP4	YDR354W	GIT1	P25346	518 aa		3.35	□□□□□ -1.87
TRP4	YDR354W	BUD23	P25627	275 aa	Predicted RBP	3.35	□□□□□ -1.87
TRP4	YDR354W	AEP1	P32493	518 aa		3.35	□□□□□ -1.87
TRP4	YDR354W	DBP7	P36120	742 aa	Known RBP	3.35	□□□□□ -1.87
TRP4	YDR354W	DRE2	P36152	348 aa		3.35	□□□□□ -1.87
TRP4	YDR354W	GOS1	P38736	223 aa		3.35	□□□□□ -1.87
TRP4	YDR354W	YHR177W	P38867	453 aa		3.35	□□□□□ -1.87
TRP4	YDR354W	AVT2	P39981	480 aa		3.35	□□□□□ -1.87
TRP4	YDR354W	ERG28	P40030	148 aa		3.35	□□□□□ -1.87
TRP4	YDR354W	POG1	P40473	351 aa		3.35	□□□□□ -1.87
TRP4	YDR354W	YJR149W	P47177	404 aa		3.35	□□□□□ -1.87
TRP4	YDR354W	FLC3	P53121	802 aa		3.35	□□□□□ -1.87
TRP4	YDR354W	NOP19	P53317	196 aa	Predicted RBP	3.35	□□□□□ -1.87
TRP4	YDR354W	YMR099C	Q03161	297 aa	Known RBP	3.35	□□□□□ -1.87
TRP4	YDR354W	YMR321C	Q04898	105 aa		3.35	□□□□□ -1.87
TRP4	YDR354W	DYN3	Q04949	312 aa		3.35	□□□□□ -1.87
TRP4	YDR354W	BER1	Q06688	274 aa	Known RBP	3.35	□□□□□ -1.87
TRP4	YDR354W	QCR7	P00128	127 aa		3.34	□□□□□ -1.87
TRP4	YDR354W	ARF1	P11076	181 aa	Known RBP	3.34	□□□□□ -1.87
TRP4	YDR354W	POX1	P13711	748 aa		3.34	□□□□□ -1.87
TRP4	YDR354W	TOA2	P32774	122 aa		3.34	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 43.8 ms