RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR261C-D	YDR261C-D	NIS1	P53939	407 aa		4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	RIM9	Q04734	239 aa		4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	AIM39	Q08223	395 aa		4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	YKL183C-A	Q3E765	70 aa		4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	ADH2	P00331	348 aa	Known RBP	4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	MSI1	P13712	422 aa		4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	CPR3	P25719	182 aa		4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	TMT1	P32643	299 aa		4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	LIP5	P32875	414 aa		4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	SUI1	P32911	108 aa	Known RBP	4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	DUT1	P33317	147 aa		4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	HEM14	P40012	539 aa		4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	MOB1	P40484	314 aa		4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	OST1	P41543	476 aa	Known RBP	4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	VPS25	P47142	202 aa		4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	UBC11	P52492	156 aa		4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	RPS8A	P0CX39	200 aa	Known RBP	4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	RPS8B	P0CX40	200 aa	Known RBP	4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	YER152C	P10356	443 aa		4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	AAC3	P18238	307 aa		4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	SOF1	P33750	489 aa	Known RBP	4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	ADH5	P38113	351 aa	Known RBP	4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	SRP14	P38985	146 aa		4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	MST28	P39552	234 aa		4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	AST2	P39945	430 aa	Known RBP	4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	SYS1	P41544	203 aa		4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	DOC1	P53068	250 aa		4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	TYW3	P53177	273 aa		4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	CRF1	Q04930	467 aa		4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	YLR407W	Q06070	228 aa		4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	MRL1	Q06815	381 aa		4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
YDR261C-D	YDR261C-D	YIL134C-A	Q45U18	67 aa		4.18	□□□□□ -1.74
YDR261C-D	YDR261C-D	COX3	P00420	269 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	BCK2	P33306	851 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	OSW5	P40219	148 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	VNX1	P42839	908 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	CWP2	P43497	92 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	DSD1	P53095	428 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	TIM21	P53220	239 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	YLR152C	P54072	576 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	YDR387C	Q04162	555 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	YLR456W	Q06199	204 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	YOL029C	Q08187	201 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	YAH1	Q12184	172 aa	Known RBP	4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	VMA9	Q3E7B6	73 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	MKK2	P32491	506 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	GCS1	P35197	352 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	VBA2	P38358	474 aa	Known RBP	4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	YER181C	P40097	107 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	CYB5	P40312	120 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	AIR1	P40507	360 aa	Known RBP	4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	GDS1	P41913	522 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	PAM16	P42949	149 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	MDM34	P53083	459 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
YDR261C-D	YDR261C-D	YLR042C	Q07990	161 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	MYO2	P19524	1574 aa	Known RBP	4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	FMP49	A0A023PZB3	126 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	CYC3	P06182	269 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	YCL002C	P25565	263 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	RPL16A	P26784	199 aa	Known RBP	4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	NNK1	P36003	928 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	YBL086C	P38177	466 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	GIP2	P40036	548 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	SHY1	P53266	389 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	YDR415C	Q04033	374 aa	Predicted RBP	4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	COQ11	Q05892	277 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	BOL1	Q3E793	110 aa		4.17	□□□□□ -1.74
YDR261C-D	YDR261C-D	PHO2	P07269	559 aa		4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	YKR104W	P0CE69	306 aa		4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	MRS4	P23500	304 aa		4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	YEF1	P32622	495 aa		4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	ECT1	P33412	323 aa		4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	LST4	P34239	828 aa		4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	YBR053C	P38235	358 aa		4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	YNL115C	P53925	644 aa		4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	SMA2	Q04658	369 aa		4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	TAF9	Q05027	157 aa		4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	YOR376W	Q08900	122 aa		4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	YPL264C	Q08980	353 aa		4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	Q0255	P03881	472 aa		4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	RIP1	P08067	215 aa		4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	AQY1	P0CD91	305 aa		4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	MDM10	P18409	493 aa		4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	LDB7	P38210	180 aa		4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	ATG12	P38316	186 aa		4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	BOL3	P39724	118 aa		4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	TIM8	P57744	87 aa		4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	SMP3	Q04174	516 aa		4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	ALG6	Q12001	544 aa	Known RBP	4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
YDR261C-D	YDR261C-D	DGK1	Q12382	290 aa		4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	AIM45	Q12480	344 aa	Known RBP	4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	HMRA1	P0CY11	126 aa		4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	SIS1	P25294	352 aa	Known RBP	4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	YCR061W	P25639	631 aa		4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	MRPS9	P38120	278 aa		4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	YAL037W	P39728	267 aa		4.16	□□□□□ -1.74
YDR261C-D	YDR261C-D	YNL200C	P40165	246 aa	Known RBP	4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms