RNA–Protein interactions for RNA: YDR261C-C

YDR261C-C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR261C-C, Length 1,323 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261C-CYDR261C-C SIP3P38717 1229 aa3.34□□□□□ -1.87
YDR261C-CYDR261C-C ERG28P40030 148 aa3.34□□□□□ -1.87
YDR261C-CYDR261C-C YJR149WP47177 404 aa3.34□□□□□ -1.87
YDR261C-CYDR261C-C MAL12P53341 584 aa3.34□□□□□ -1.87
YDR261C-CYDR261C-C YNL046WP53956 172 aa3.34□□□□□ -1.87
YDR261C-CYDR261C-C MRPS17Q03246 237 aaPredicted RBP3.34□□□□□ -1.87
YDR261C-CYDR261C-C YOR186WQ08560 144 aa3.34□□□□□ -1.87
YDR261C-CYDR261C-C IES3Q12345 250 aa3.34□□□□□ -1.87
YDR261C-CYDR261C-C SNA3P14359 133 aa3.33□□□□□ -1.88
YDR261C-CYDR261C-C CDC10P25342 322 aaKnown RBP3.33□□□□□ -1.88
YDR261C-CYDR261C-C ECM13P38195 257 aa3.33□□□□□ -1.88
YDR261C-CYDR261C-C SPL2P38839 148 aa3.33□□□□□ -1.88
YDR261C-CYDR261C-C YJL028WP47062 111 aa3.33□□□□□ -1.88
YDR261C-CYDR261C-C MIC26P50087 233 aa3.33□□□□□ -1.88
YDR261C-CYDR261C-C EMI1Q04406 187 aa3.33□□□□□ -1.88
YDR261C-CYDR261C-C YMR114CQ04471 368 aaKnown RBP3.33□□□□□ -1.88
YDR261C-CYDR261C-C RRP40Q08285 240 aaKnown RBP3.33□□□□□ -1.88
YDR261C-CYDR261C-C SYC1Q08553 188 aaPredicted RBP3.33□□□□□ -1.88
YDR261C-CYDR261C-C YLR126CQ12288 251 aa3.33□□□□□ -1.88
YDR261C-CYDR261C-C NOT5Q12514 560 aaPredicted RBP3.33□□□□□ -1.88
YDR261C-CYDR261C-C YPL247CQ12523 523 aa3.33□□□□□ -1.88
YDR261C-CYDR261C-C SPT3P06844 337 aa3.32□□□□□ -1.88
YDR261C-CYDR261C-C BCY1P07278 416 aaKnown RBP3.32□□□□□ -1.88
YDR261C-CYDR261C-C YBR121C-AP0C5L4 52 aa3.32□□□□□ -1.88
YDR261C-CYDR261C-C ZWF1P11412 505 aaKnown RBP3.32□□□□□ -1.88
YDR261C-CYDR261C-C ERD2P18414 219 aa3.32□□□□□ -1.88
YDR261C-CYDR261C-C PPH21P23594 369 aa3.32□□□□□ -1.88
YDR261C-CYDR261C-C TOM40P23644 387 aaKnown RBP3.32□□□□□ -1.88
YDR261C-CYDR261C-C PRP18P33411 251 aaPredicted RBP3.32□□□□□ -1.88
YDR261C-CYDR261C-C CBT1P36038 271 aaPredicted RBP3.32□□□□□ -1.88
YDR261C-CYDR261C-C YHB1P39676 399 aaKnown RBP3.32□□□□□ -1.88
YDR261C-CYDR261C-C COX15P40086 486 aa3.32□□□□□ -1.88
YDR261C-CYDR261C-C PRE6P40303 254 aaKnown RBP3.32□□□□□ -1.88
YDR261C-CYDR261C-C RAD17P48581 401 aa3.32□□□□□ -1.88
YDR261C-CYDR261C-C TOS8P53147 276 aa3.32□□□□□ -1.88
YDR261C-CYDR261C-C BNA7Q04066 261 aa3.32□□□□□ -1.88
YDR261C-CYDR261C-C FCF1Q05498 189 aaPredicted RBP3.32□□□□□ -1.88
YDR261C-CYDR261C-C SMT3Q12306 101 aaKnown RBP3.32□□□□□ -1.88
YDR261C-CYDR261C-C YDL012CQ12489 107 aa3.32□□□□□ -1.88
YDR261C-CYDR261C-C PAN1P32521 1480 aa3.32□□□□□ -1.88
YDR261C-CYDR261C-C GDH2P33327 1092 aaKnown RBP3.31□□□□□ -1.88
YDR261C-CYDR261C-C PRY2P36110 329 aa3.31□□□□□ -1.88
YDR261C-CYDR261C-C MCM22P47167 239 aa3.31□□□□□ -1.88
YDR261C-CYDR261C-C CWC23P52868 283 aaPredicted RBP3.31□□□□□ -1.88
YDR261C-CYDR261C-C NIF3P53081 288 aa3.31□□□□□ -1.88
YDR261C-CYDR261C-C CGR1P53188 120 aa3.31□□□□□ -1.88
YDR261C-CYDR261C-C YDR124WQ04608 324 aa3.31□□□□□ -1.88
YDR261C-CYDR261C-C EMP46Q12396 444 aa3.31□□□□□ -1.88
YDR261C-CYDR261C-C YBL008W-AQ3E821 79 aa3.31□□□□□ -1.88
YDR261C-CYDR261C-C STE18P18852 110 aa3.3□□□□□ -1.88
YDR261C-CYDR261C-C PRX1P34227 261 aaKnown RBP3.3□□□□□ -1.88
YDR261C-CYDR261C-C MRPL39P36533 70 aa3.3□□□□□ -1.88
YDR261C-CYDR261C-C TEM1P38987 245 aa3.3□□□□□ -1.88
YDR261C-CYDR261C-C YNL194CP40169 301 aa3.3□□□□□ -1.88
YDR261C-CYDR261C-C TRM9P49957 279 aa3.3□□□□□ -1.88
YDR261C-CYDR261C-C MGA1P53050 456 aa3.3□□□□□ -1.88
YDR261C-CYDR261C-C RSM27P53305 110 aa3.3□□□□□ -1.88
YDR261C-CYDR261C-C CDC123Q05791 360 aa3.3□□□□□ -1.88
YDR261C-CYDR261C-C YOL019WQ08157 551 aa3.3□□□□□ -1.88
YDR261C-CYDR261C-C TPO4Q12256 659 aa3.3□□□□□ -1.88
YDR261C-CYDR261C-C ISD11Q6Q560 94 aa3.3□□□□□ -1.88
YDR261C-CYDR261C-C YDR157WA0A023PZE8 133 aa3.29□□□□□ -1.88
YDR261C-CYDR261C-C BMH1P29311 267 aaKnown RBP3.29□□□□□ -1.88
YDR261C-CYDR261C-C AGA2P32781 87 aa3.29□□□□□ -1.88
YDR261C-CYDR261C-C TAF14P35189 244 aa3.29□□□□□ -1.88
YDR261C-CYDR261C-C HAM1P47119 197 aaKnown RBP3.29□□□□□ -1.88
YDR261C-CYDR261C-C GOT1Q03554 138 aa3.29□□□□□ -1.88
YDR261C-CYDR261C-C IES4Q08561 116 aa3.29□□□□□ -1.88
YDR261C-CYDR261C-C YPR011CQ12251 326 aa3.29□□□□□ -1.88
YDR261C-CYDR261C-C DCN1Q12395 269 aa3.29□□□□□ -1.88
YDR261C-CYDR261C-C AST1P35183 429 aa3.28□□□□□ -1.88
YDR261C-CYDR261C-C MDM34P53083 459 aa3.28□□□□□ -1.88
YDR261C-CYDR261C-C NSA1P53136 463 aaPredicted RBP3.28□□□□□ -1.88
YDR261C-CYDR261C-C CUS2P53830 285 aaPredicted RBP3.28□□□□□ -1.88
YDR261C-CYDR261C-C ALG9P53868 555 aaKnown RBP3.28□□□□□ -1.88
YDR261C-CYDR261C-C MSA1Q08471 629 aa3.28□□□□□ -1.88
YDR261C-CYDR261C-C YPL150WQ12152 901 aa3.28□□□□□ -1.88
YDR261C-CYDR261C-C YEL009C-AA0A023PZF2 135 aa3.27□□□□□ -1.89
YDR261C-CYDR261C-C YHR139C-AO13536 103 aa3.27□□□□□ -1.89
YDR261C-CYDR261C-C SFC1P33303 322 aa3.27□□□□□ -1.89
YDR261C-CYDR261C-C TKL2P33315 681 aa3.27□□□□□ -1.89
YDR261C-CYDR261C-C ECM14P38836 430 aa3.27□□□□□ -1.89
YDR261C-CYDR261C-C YER189WP40104 122 aa3.27□□□□□ -1.89
YDR261C-CYDR261C-C YIR035CP40579 254 aa3.27□□□□□ -1.89
YDR261C-CYDR261C-C MIG2P53035 382 aa3.27□□□□□ -1.89
YDR261C-CYDR261C-C ALG13P53178 202 aa3.27□□□□□ -1.89
YDR261C-CYDR261C-C SSQ1Q05931 657 aaPredicted RBP3.27□□□□□ -1.89
YDR261C-CYDR261C-C YPR063CQ12160 140 aa3.27□□□□□ -1.89
YDR261C-CYDR261C-C SWI1P09547 1314 aa3.27□□□□□ -1.89
YDR261C-CYDR261C-C HIS3P06633 220 aa3.26□□□□□ -1.89
YDR261C-CYDR261C-C RPS23AP0CX29 145 aaKnown RBP3.26□□□□□ -1.89
YDR261C-CYDR261C-C RPS23BP0CX30 145 aa3.26□□□□□ -1.89
YDR261C-CYDR261C-C SSO1P32867 290 aa3.26□□□□□ -1.89
YDR261C-CYDR261C-C SRY1P36007 326 aa3.26□□□□□ -1.89
YDR261C-CYDR261C-C YMR144WP40214 342 aaKnown RBP3.26□□□□□ -1.89
YDR261C-CYDR261C-C ECO1P43605 281 aa3.26□□□□□ -1.89
YDR261C-CYDR261C-C NUP157P40064 1391 aaKnown RBP3.26□□□□□ -1.89
YDR261C-CYDR261C-C NUP57P48837 541 aa3.25□□□□□ -1.89
YDR261C-CYDR261C-C YPR172WQ06608 200 aa3.25□□□□□ -1.89
YDR261C-CYDR261C-C GET4Q12125 312 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 53.9 ms