RNA–Protein interactions for RNA: YDR126W

SWF1, Transcript of Palmitoyltransferase that acts on transmembrane proteins, yeast

Gene SWF1, Length 1,011 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWF1	YDR126W	PRM9	P39551	298 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	THO1	P40040	218 aa	Known RBP	0.7	□□□□□ -2.3
SWF1	YDR126W	COX15	P40086	486 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	MEP1	P40260	492 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	PRE6	P40303	254 aa	Known RBP	0.7	□□□□□ -2.3
SWF1	YDR126W	RSM25	P40496	264 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	AGX1	P43567	385 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	YAR1	P46683	200 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	GCD14	P46959	383 aa	Predicted RBP	0.7	□□□□□ -2.3
SWF1	YDR126W	ILM1	P47155	203 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	IBA57	P47158	497 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	MNT4	P53745	580 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	SRL4	Q03085	281 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	ABZ2	Q03266	374 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	CWC21	Q03375	135 aa	Known RBP	0.7	□□□□□ -2.3
SWF1	YDR126W	VBA1	Q04301	562 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	YDR124W	Q04608	324 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	PEX10	Q05568	337 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	YLR283W	Q05867	314 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	SFH1	Q06168	426 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	SLD7	Q08457	257 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	AI5_BETA	Q9ZZX0	354 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	STH1	P32597	1359 aa		0.7	□□□□□ -2.3
SWF1	YDR126W	COX2	P00410	251 aa		0.69	□□□□□ -2.3
SWF1	YDR126W	RPS3	P05750	240 aa	Known RBP	0.69	□□□□□ -2.3
SWF1	YDR126W	MSF1	P08425	469 aa		0.69	□□□□□ -2.3
SWF1	YDR126W	RPL24B	P24000	155 aa	Known RBP	0.69	□□□□□ -2.3
SWF1	YDR126W	RNP1	P32385	249 aa		0.69	□□□□□ -2.3
SWF1	YDR126W	CUE1	P38428	203 aa		0.69	□□□□□ -2.3
SWF1	YDR126W	PRS2	P38620	318 aa	Known RBP	0.69	□□□□□ -2.3
SWF1	YDR126W	YRB1	P41920	201 aa	Known RBP	0.69	□□□□□ -2.3
SWF1	YDR126W	FMP33	P46998	180 aa		0.69	□□□□□ -2.3
SWF1	YDR126W	RMR1	P53060	241 aa		0.69	□□□□□ -2.3
SWF1	YDR126W	NIF3	P53081	288 aa		0.69	□□□□□ -2.3
SWF1	YDR126W	USE1	P53146	245 aa		0.69	□□□□□ -2.3
SWF1	YDR126W	CGR1	P53188	120 aa		0.69	□□□□□ -2.3
SWF1	YDR126W	FMP41	P53889	259 aa	Known RBP	0.69	□□□□□ -2.3
SWF1	YDR126W	AAH1	P53909	347 aa		0.69	□□□□□ -2.3
SWF1	YDR126W	PRM15	Q03262	622 aa		0.69	□□□□□ -2.3
SWF1	YDR126W	SDC1	Q03323	175 aa		0.69	□□□□□ -2.3
SWF1	YDR126W	GOT1	Q03554	138 aa		0.69	□□□□□ -2.3
SWF1	YDR126W	YPR098C	Q06089	161 aa		0.69	□□□□□ -2.3
SWF1	YDR126W	YPR147C	Q06522	304 aa	Known RBP	0.69	□□□□□ -2.3
SWF1	YDR126W	PAM18	Q07914	168 aa		0.69	□□□□□ -2.3
SWF1	YDR126W	SYC1	Q08553	188 aa	Predicted RBP	0.69	□□□□□ -2.3
SWF1	YDR126W	PST1	Q12355	444 aa		0.69	□□□□□ -2.3
SWF1	YDR126W	GEP5	Q12393	293 aa		0.69	□□□□□ -2.3
SWF1	YDR126W	RRP36	Q12481	300 aa	Predicted RBP	0.69	□□□□□ -2.3
SWF1	YDR126W	LSO2	Q3E772	92 aa	Known RBP	0.69	□□□□□ -2.3
SWF1	YDR126W	NCB2	Q92317	146 aa		0.69	□□□□□ -2.3
SWF1	YDR126W	SAS5	Q99314	248 aa		0.69	□□□□□ -2.3
SWF1	YDR126W	RAS2	P01120	322 aa	Known RBP	0.68	□□□□□ -2.3
SWF1	YDR126W	COS2	P0CX12	379 aa		0.68	□□□□□ -2.3
SWF1	YDR126W	COS3	P0CX13	379 aa		0.68	□□□□□ -2.3
SWF1	YDR126W	RPB4	P20433	221 aa	Predicted RBP	0.68	□□□□□ -2.3
SWF1	YDR126W	MRPL25	P23369	157 aa		0.68	□□□□□ -2.3
SWF1	YDR126W	YGL010W	P25338	174 aa		0.68	□□□□□ -2.3
SWF1	YDR126W	YCR016W	P25617	290 aa	Known RBP	0.68	□□□□□ -2.3
SWF1	YDR126W	SGE1	P33335	543 aa		0.68	□□□□□ -2.3
SWF1	YDR126W	VPS21	P36017	210 aa	Known RBP	0.68	□□□□□ -2.3
SWF1	YDR126W	COS8	P38723	381 aa		0.68	□□□□□ -2.3
SWF1	YDR126W	COA1	P40452	197 aa		0.68	□□□□□ -2.3
SWF1	YDR126W	BNA6	P43619	295 aa		0.68	□□□□□ -2.3
SWF1	YDR126W	HAM1	P47119	197 aa	Known RBP	0.68	□□□□□ -2.3
SWF1	YDR126W	YGL185C	P53100	379 aa		0.68	□□□□□ -2.3
SWF1	YDR126W	MRH4	P53166	561 aa		0.68	□□□□□ -2.3
SWF1	YDR126W	PEX31	P53203	462 aa		0.68	□□□□□ -2.3
SWF1	YDR126W	YGR026W	P53217	278 aa		0.68	□□□□□ -2.3
SWF1	YDR126W	LSB1	P53281	241 aa		0.68	□□□□□ -2.3
SWF1	YDR126W	MAL13	P53338	473 aa		0.68	□□□□□ -2.3
SWF1	YDR126W	ABF2	Q02486	183 aa		0.68	□□□□□ -2.3
SWF1	YDR126W	CTF19	Q02732	369 aa		0.68	□□□□□ -2.3
SWF1	YDR126W	PET117	Q02771	107 aa		0.68	□□□□□ -2.3
SWF1	YDR126W	YMR279C	Q03263	540 aa		0.68	□□□□□ -2.3
SWF1	YDR126W	COX20	Q04935	205 aa		0.68	□□□□□ -2.3
SWF1	YDR126W	FAR8	Q05040	523 aa		0.68	□□□□□ -2.3
SWF1	YDR126W	SSQ1	Q05931	657 aa	Predicted RBP	0.68	□□□□□ -2.3
SWF1	YDR126W	BOP2	Q06150	570 aa		0.68	□□□□□ -2.3
SWF1	YDR126W	SDO1	Q07953	250 aa	Known RBP	0.68	□□□□□ -2.3
SWF1	YDR126W	RRP40	Q08285	240 aa	Known RBP	0.68	□□□□□ -2.3
SWF1	YDR126W	RRS1	Q08746	203 aa	Known RBP	0.68	□□□□□ -2.3
SWF1	YDR126W	YCT1	Q12235	531 aa		0.68	□□□□□ -2.3
SWF1	YDR126W	DCN1	Q12395	269 aa		0.68	□□□□□ -2.3
SWF1	YDR126W	MHT1	Q12525	324 aa		0.68	□□□□□ -2.3
SWF1	YDR126W	SEY1	Q99287	776 aa		0.68	□□□□□ -2.3
SWF1	YDR126W	YLR462W	O13556	202 aa		0.67	□□□□□ -2.3
SWF1	YDR126W	YKR104W	P0CE69	306 aa		0.67	□□□□□ -2.3
SWF1	YDR126W	FBA1	P14540	359 aa	Known RBP	0.67	□□□□□ -2.3
SWF1	YDR126W	POF1	P25576	258 aa		0.67	□□□□□ -2.3
SWF1	YDR126W	PPA2	P28239	310 aa		0.67	□□□□□ -2.3
SWF1	YDR126W	HOM6	P31116	359 aa	Known RBP	0.67	□□□□□ -2.3
SWF1	YDR126W	VMA6	P32366	345 aa	Known RBP	0.67	□□□□□ -2.3
SWF1	YDR126W	MSN4	P33749	630 aa		0.67	□□□□□ -2.3
SWF1	YDR126W	BMH2	P34730	273 aa	Known RBP	0.67	□□□□□ -2.3
SWF1	YDR126W	MAL32	P38158	584 aa		0.67	□□□□□ -2.3
SWF1	YDR126W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	0.67	□□□□□ -2.3	RIP-Chip
SWF1	YDR126W	YHL049C	P38722	271 aa		0.67	□□□□□ -2.3
SWF1	YDR126W	YHR127W	P38833	243 aa	Known RBP	0.67	□□□□□ -2.3
SWF1	YDR126W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	0.67	□□□□□ -2.3	not detected
SWF1	YDR126W	YEL075C	P39972	122 aa		0.67	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 69.9 ms