RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM1	YDR120C	YNL247W	P53852	767 aa	Known RBP	3.16	□□□□□ -1.9
TRM1	YDR120C	UTP15	Q04305	513 aa	Known RBP	3.16	□□□□□ -1.9
TRM1	YDR120C	YOR292C	Q08743	309 aa		3.16	□□□□□ -1.9
TRM1	YDR120C	EFG1	Q3E705	233 aa	Known RBP	3.16	□□□□□ -1.9
TRM1	YDR120C	IFM1	P25038	676 aa		3.16	□□□□□ -1.9
TRM1	YDR120C	ZRT3	P34240	503 aa		3.16	□□□□□ -1.9
TRM1	YDR120C	GPX1	P36014	167 aa		3.16	□□□□□ -1.9
TRM1	YDR120C	YER184C	P39961	794 aa		3.16	□□□□□ -1.9
TRM1	YDR120C	FMP33	P46998	180 aa		3.16	□□□□□ -1.9
TRM1	YDR120C	YDR222W	Q04925	415 aa		3.16	□□□□□ -1.9
TRM1	YDR120C	ECM19	Q06011	112 aa		3.16	□□□□□ -1.9
TRM1	YDR120C	RRP42	Q12277	265 aa	Predicted RBP	3.16	□□□□□ -1.9
TRM1	YDR120C	YPR064W	Q12492	139 aa		3.16	□□□□□ -1.9
TRM1	YDR120C	PPH21	P23594	369 aa		3.15	□□□□□ -1.91
TRM1	YDR120C	YBR062C	P38239	180 aa		3.15	□□□□□ -1.91
TRM1	YDR120C	SMC2	P38989	1170 aa	Known RBP	3.15	□□□□□ -1.91
TRM1	YDR120C	YNL040W	P53960	456 aa	Predicted RBP	3.15	□□□□□ -1.91
TRM1	YDR120C	RSM10	Q03201	203 aa		3.15	□□□□□ -1.91
TRM1	YDR120C	SEC13	Q04491	297 aa	Known RBP	3.15	□□□□□ -1.91
TRM1	YDR120C	TAZ1	Q06510	381 aa		3.15	□□□□□ -1.91
TRM1	YDR120C	GPN3	Q06543	272 aa		3.15	□□□□□ -1.91
TRM1	YDR120C	SWC7	Q06707	132 aa		3.15	□□□□□ -1.91
TRM1	YDR120C	VIK1	Q12045	647 aa		3.15	□□□□□ -1.91
TRM1	YDR120C	TRM10	Q12400	293 aa		3.15	□□□□□ -1.91
TRM1	YDR120C	DFM1	Q12743	341 aa	Known RBP	3.15	□□□□□ -1.91
TRM1	YDR120C	TDH1	P00360	332 aa	Known RBP	3.14	□□□□□ -1.91
TRM1	YDR120C	NOP1	P15646	327 aa	Known RBP	3.14	□□□□□ -1.91
TRM1	YDR120C	MIC19	P43594	170 aa		3.14	□□□□□ -1.91
TRM1	YDR120C	RNY1	Q02933	434 aa	Known RBP	3.14	□□□□□ -1.91
TRM1	YDR120C	LDB18	Q07887	179 aa		3.14	□□□□□ -1.91
TRM1	YDR120C	COX10	P21592	462 aa		3.13	□□□□□ -1.91
TRM1	YDR120C	TPO5	P36029	618 aa		3.13	□□□□□ -1.91
TRM1	YDR120C	TDA11	P38854	504 aa		3.13	□□□□□ -1.91
TRM1	YDR120C	AIM18	P38884	321 aa		3.13	□□□□□ -1.91
TRM1	YDR120C	YPT32	P51996	222 aa	Known RBP	3.13	□□□□□ -1.91
TRM1	YDR120C	TIM13	P53299	105 aa		3.13	□□□□□ -1.91
TRM1	YDR120C	PEX30	Q06169	523 aa		3.13	□□□□□ -1.91
TRM1	YDR120C	VPS68	Q12016	184 aa		3.13	□□□□□ -1.91
TRM1	YDR120C	POM33	Q12164	279 aa		3.13	□□□□□ -1.91
TRM1	YDR120C	TFC7	Q12415	435 aa		3.13	□□□□□ -1.91
TRM1	YDR120C	TFS1	P14306	219 aa		3.13	□□□□□ -1.91
TRM1	YDR120C	FUS3	P16892	353 aa	Known RBP	3.13	□□□□□ -1.91
TRM1	YDR120C	SCL1	P21243	252 aa	Known RBP	3.13	□□□□□ -1.91
TRM1	YDR120C	MEI4	P29467	408 aa		3.13	□□□□□ -1.91
TRM1	YDR120C	FRM2	P37261	193 aa		3.13	□□□□□ -1.91
TRM1	YDR120C	EMI1	Q04406	187 aa		3.13	□□□□□ -1.91
TRM1	YDR120C	PLB3	Q08108	686 aa		3.13	□□□□□ -1.91
TRM1	YDR120C	OCA6	Q12454	224 aa		3.13	□□□□□ -1.91
TRM1	YDR120C	YDL012C	Q12489	107 aa		3.13	□□□□□ -1.91
TRM1	YDR120C	COX5A	P00424	153 aa		3.12	□□□□□ -1.91
TRM1	YDR120C	IPP1	P00817	287 aa	Known RBP	3.12	□□□□□ -1.91
TRM1	YDR120C	CPA1	P07258	411 aa	Known RBP	3.12	□□□□□ -1.91
TRM1	YDR120C	YSR3	P23501	404 aa		3.12	□□□□□ -1.91
TRM1	YDR120C	RPB9	P27999	122 aa		3.12	□□□□□ -1.91
TRM1	YDR120C	ZIP1	P31111	875 aa		3.12	□□□□□ -1.91
TRM1	YDR120C	CDC13	P32797	924 aa	Known RBP	3.12	□□□□□ -1.91
TRM1	YDR120C	TAF14	P35189	244 aa		3.12	□□□□□ -1.91
TRM1	YDR120C	MRPL37	P36532	105 aa		3.12	□□□□□ -1.91
TRM1	YDR120C	BUD13	P46947	266 aa	Predicted RBP	3.12	□□□□□ -1.91
TRM1	YDR120C	EMC2	P47133	292 aa	Known RBP	3.12	□□□□□ -1.91
TRM1	YDR120C	CDC14	Q00684	551 aa		3.12	□□□□□ -1.91
TRM1	YDR120C	SPP2	Q02521	185 aa		3.12	□□□□□ -1.91
TRM1	YDR120C	QCR6	P00127	147 aa		3.11	□□□□□ -1.91
TRM1	YDR120C	VPH2	P32341	215 aa		3.11	□□□□□ -1.91
TRM1	YDR120C	AEP1	P32493	518 aa		3.11	□□□□□ -1.91
TRM1	YDR120C	GCG1	P32656	232 aa	Known RBP	3.11	□□□□□ -1.91
TRM1	YDR120C	DED81	P38707	554 aa	Known RBP	3.11	□□□□□ -1.91
TRM1	YDR120C	CYC2	P38909	366 aa		3.11	□□□□□ -1.91
TRM1	YDR120C	BDH1	P39714	382 aa		3.11	□□□□□ -1.91
TRM1	YDR120C	YIA6	P40556	373 aa		3.11	□□□□□ -1.91
TRM1	YDR120C	MRX5	P47007	382 aa		3.11	□□□□□ -1.91
TRM1	YDR120C	YGL118C	P53132	145 aa		3.11	□□□□□ -1.91
TRM1	YDR120C	MRX8	Q05473	314 aa		3.11	□□□□□ -1.91
TRM1	YDR120C	YOL024W	Q08172	172 aa		3.11	□□□□□ -1.91
TRM1	YDR120C	UBR1	P19812	1950 aa		3.11	□□□□□ -1.91
TRM1	YDR120C	SPT4	P32914	102 aa	Predicted RBP	3.1	□□□□□ -1.91
TRM1	YDR120C	PET100	P38958	111 aa		3.1	□□□□□ -1.91
TRM1	YDR120C	RCY1	P39531	840 aa		3.1	□□□□□ -1.91
TRM1	YDR120C	FRT2	P39734	528 aa		3.1	□□□□□ -1.91
TRM1	YDR120C	ACT1	P60010	375 aa	Known RBP	3.1	□□□□□ -1.91
TRM1	YDR120C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
TRM1	YDR120C	YDL211C	Q12121	372 aa		3.1	□□□□□ -1.91
TRM1	YDR120C	YOR114W	Q12219	294 aa		3.1	□□□□□ -1.91
TRM1	YDR120C	YBR056W-A	I2HB52	66 aa		3.1	□□□□□ -1.91
TRM1	YDR120C	RPL43A	P0CX25	92 aa	Known RBP	3.1	□□□□□ -1.91
TRM1	YDR120C	RPL43B	P0CX26	92 aa		3.1	□□□□□ -1.91
TRM1	YDR120C	MRPL6	P32904	214 aa		3.1	□□□□□ -1.91
TRM1	YDR120C	AIM29	P36154	155 aa		3.1	□□□□□ -1.91
TRM1	YDR120C	MBA1	P38300	278 aa		3.1	□□□□□ -1.91
TRM1	YDR120C	TPN1	P53099	579 aa		3.1	□□□□□ -1.91
TRM1	YDR120C	DPP1	Q05521	289 aa		3.1	□□□□□ -1.91
TRM1	YDR120C	YLL007C	Q07799	665 aa		3.1	□□□□□ -1.91
TRM1	YDR120C	MDM35	O60200	86 aa		3.09	□□□□□ -1.91
TRM1	YDR120C	YCR025C	P25352	136 aa		3.09	□□□□□ -1.91
TRM1	YDR120C	PRP18	P33411	251 aa	Predicted RBP	3.09	□□□□□ -1.91
TRM1	YDR120C	MAK5	P38112	773 aa	Predicted RBP	3.09	□□□□□ -1.91
TRM1	YDR120C	TRR2	P38816	342 aa		3.09	□□□□□ -1.91
TRM1	YDR120C	ASP1	P38986	381 aa	Predicted RBP	3.09	□□□□□ -1.91
TRM1	YDR120C	SCC4	P40090	624 aa		3.09	□□□□□ -1.91
TRM1	YDR120C	YFL064C	P43540	174 aa		3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms