RNA–Protein interactions for RNA: YDL201W

TRM8, Transcript of Noncatalytic subunit of a tRNA methyltransferase complex, yeast

Gene TRM8, Length 861 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM8	YDL201W	SEC1	P30619	724 aa	Known RBP	4.14	□□□□□ -1.75
TRM8	YDL201W	PMT2	P31382	759 aa		4.14	□□□□□ -1.75
TRM8	YDL201W	PDC2	P32896	925 aa		4.14	□□□□□ -1.75
TRM8	YDL201W	TIP20	P33891	701 aa		4.14	□□□□□ -1.75
TRM8	YDL201W	KTI12	P34253	313 aa	Known RBP	4.14	□□□□□ -1.75
TRM8	YDL201W	UPS2	P35200	230 aa		4.14	□□□□□ -1.75
TRM8	YDL201W	SPC34	P36131	295 aa		4.14	□□□□□ -1.75
TRM8	YDL201W	MRPL3	P36516	390 aa		4.14	□□□□□ -1.75
TRM8	YDL201W	YPC1	P38298	316 aa		4.14	□□□□□ -1.75
TRM8	YDL201W	YHR127W	P38833	243 aa	Known RBP	4.14	□□□□□ -1.75
TRM8	YDL201W	MET30	P39014	640 aa		4.14	□□□□□ -1.75
TRM8	YDL201W	PRM10	P42946	383 aa		4.14	□□□□□ -1.75
TRM8	YDL201W	WWM1	P43582	211 aa	Known RBP	4.14	□□□□□ -1.75
TRM8	YDL201W	MIC19	P43594	170 aa		4.14	□□□□□ -1.75
TRM8	YDL201W	TRM9	P49957	279 aa		4.14	□□□□□ -1.75
TRM8	YDL201W	VHT1	P53241	593 aa		4.14	□□□□□ -1.75
TRM8	YDL201W	PDR17	P53844	350 aa		4.14	□□□□□ -1.75
TRM8	YDL201W	TDA1	Q03533	586 aa		4.14	□□□□□ -1.75
TRM8	YDL201W	YMR206W	Q03695	313 aa		4.14	□□□□□ -1.75
TRM8	YDL201W	YMR166C	Q03829	368 aa		4.14	□□□□□ -1.75
TRM8	YDL201W	YLR446W	Q06204	433 aa		4.14	□□□□□ -1.75
TRM8	YDL201W	DXO1	Q06349	442 aa		4.14	□□□□□ -1.75
TRM8	YDL201W	TPO3	Q06451	622 aa		4.14	□□□□□ -1.75
TRM8	YDL201W	MRX9	Q07349	420 aa	Known RBP	4.14	□□□□□ -1.75
TRM8	YDL201W	FCY22	Q12119	530 aa		4.14	□□□□□ -1.75
TRM8	YDL201W	BBP1	Q12365	385 aa		4.14	□□□□□ -1.75
TRM8	YDL201W	YPL119C-A	Q3E751	87 aa		4.14	□□□□□ -1.75
TRM8	YDL201W	BI3	Q9ZZW7	517 aa		4.14	□□□□□ -1.75
TRM8	YDL201W	RPN13	O13563	156 aa		4.13	□□□□□ -1.75
TRM8	YDL201W	ASP3-2	P0CX77	362 aa		4.13	□□□□□ -1.75
TRM8	YDL201W	ASP3-3	P0CX78	362 aa		4.13	□□□□□ -1.75
TRM8	YDL201W	ASP3-4	P0CX79	362 aa		4.13	□□□□□ -1.75
TRM8	YDL201W	ASP3-1	P0CZ17	362 aa		4.13	□□□□□ -1.75
TRM8	YDL201W	PET54	P10834	293 aa		4.13	□□□□□ -1.75
TRM8	YDL201W	CDC43	P18898	376 aa		4.13	□□□□□ -1.75
TRM8	YDL201W	MRPL28	P36527	147 aa		4.13	□□□□□ -1.75
TRM8	YDL201W	ECM13	P38195	257 aa		4.13	□□□□□ -1.75
TRM8	YDL201W	COX14	P39103	70 aa		4.13	□□□□□ -1.75
TRM8	YDL201W	MOB2	P43563	287 aa		4.13	□□□□□ -1.75
TRM8	YDL201W	GWT1	P47026	490 aa		4.13	□□□□□ -1.75
TRM8	YDL201W	CPR7	P47103	393 aa		4.13	□□□□□ -1.75
TRM8	YDL201W	POP6	P53218	158 aa		4.13	□□□□□ -1.75
TRM8	YDL201W	YNR066C	P53752	436 aa		4.13	□□□□□ -1.75
TRM8	YDL201W	TIM44	Q01852	431 aa		4.13	□□□□□ -1.75
TRM8	YDL201W	DPP1	Q05521	289 aa		4.13	□□□□□ -1.75
TRM8	YDL201W	ORM2	Q06144	216 aa		4.13	□□□□□ -1.75
TRM8	YDL201W	IES4	Q08561	116 aa		4.13	□□□□□ -1.75
TRM8	YDL201W	MMT2	Q08970	484 aa		4.13	□□□□□ -1.75
TRM8	YDL201W	RFM1	Q12192	310 aa		4.13	□□□□□ -1.75
TRM8	YDL201W	YLR126C	Q12288	251 aa		4.13	□□□□□ -1.75
TRM8	YDL201W	SFM1	Q12314	213 aa		4.13	□□□□□ -1.75
TRM8	YDL201W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.13	□□□□□ -1.75
TRM8	YDL201W	PIS1	P06197	220 aa	Known RBP	4.12	□□□□□ -1.75
TRM8	YDL201W	NHP6A	P11632	93 aa	Known RBP	4.12	□□□□□ -1.75
TRM8	YDL201W	IDP1	P21954	428 aa	Known RBP	4.12	□□□□□ -1.75
TRM8	YDL201W	SEC22	P22214	214 aa		4.12	□□□□□ -1.75
TRM8	YDL201W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
TRM8	YDL201W	SHE3	P38272	425 aa	Known RBP	4.12	□□□□□ -1.75
TRM8	YDL201W	SEN34	P39707	275 aa		4.12	□□□□□ -1.75
TRM8	YDL201W	AZF1	P41696	914 aa		4.12	□□□□□ -1.75
TRM8	YDL201W	CTK3	P46963	296 aa	Predicted RBP	4.12	□□□□□ -1.75
TRM8	YDL201W	YPS5	P53057	165 aa		4.12	□□□□□ -1.75
TRM8	YDL201W	RPL22B	P56628	122 aa	Known RBP	4.12	□□□□□ -1.75
TRM8	YDL201W	DIG1	Q03063	452 aa	Known RBP	4.12	□□□□□ -1.75
TRM8	YDL201W	YDR248C	Q03786	193 aa		4.12	□□□□□ -1.75
TRM8	YDL201W	PLP1	Q04004	230 aa		4.12	□□□□□ -1.75
TRM8	YDL201W	YMR315W	Q04869	349 aa	Known RBP	4.12	□□□□□ -1.75
TRM8	YDL201W	GRX8	Q05926	109 aa		4.12	□□□□□ -1.75
TRM8	YDL201W	RPN8	Q08723	338 aa	Known RBP	4.12	□□□□□ -1.75
TRM8	YDL201W	RPN6	Q12377	434 aa		4.12	□□□□□ -1.75
TRM8	YDL201W	RDI1	Q12434	202 aa		4.12	□□□□□ -1.75
TRM8	YDL201W	AGC1	Q12482	902 aa		4.12	□□□□□ -1.75
TRM8	YDL201W	FOL3	Q12676	427 aa	Predicted RBP	4.12	□□□□□ -1.75
TRM8	YDL201W	TAH1	P25638	111 aa	Predicted RBP	4.11	□□□□□ -1.75
TRM8	YDL201W	GLC7	P32598	312 aa	Known RBP	4.11	□□□□□ -1.75
TRM8	YDL201W	CLG1	P35190	452 aa		4.11	□□□□□ -1.75
TRM8	YDL201W	MRP21	P38175	177 aa		4.11	□□□□□ -1.75
TRM8	YDL201W	AVT5	P38176	459 aa		4.11	□□□□□ -1.75
TRM8	YDL201W	LEU5	P38702	357 aa		4.11	□□□□□ -1.75
TRM8	YDL201W	MDM31	P38880	579 aa		4.11	□□□□□ -1.75
TRM8	YDL201W	YMR144W	P40214	342 aa	Known RBP	4.11	□□□□□ -1.75
TRM8	YDL201W	PDS1	P40316	373 aa	Predicted RBP	4.11	□□□□□ -1.75
TRM8	YDL201W	PHB1	P40961	287 aa		4.11	□□□□□ -1.75
TRM8	YDL201W	RTS2	P40962	232 aa		4.11	□□□□□ -1.75
TRM8	YDL201W	COS4	P43542	379 aa		4.11	□□□□□ -1.75
TRM8	YDL201W	TPN1	P53099	579 aa		4.11	□□□□□ -1.75
TRM8	YDL201W	COG5	P53951	403 aa		4.11	□□□□□ -1.75
TRM8	YDL201W	YNL040W	P53960	456 aa	Predicted RBP	4.11	□□□□□ -1.75
TRM8	YDL201W	TPS1	Q00764	495 aa	Known RBP	4.11	□□□□□ -1.75
TRM8	YDL201W	YML018C	Q03730	393 aa		4.11	□□□□□ -1.75
TRM8	YDL201W	YMR321C	Q04898	105 aa		4.11	□□□□□ -1.75
TRM8	YDL201W	PEX30	Q06169	523 aa		4.11	□□□□□ -1.75
TRM8	YDL201W	TAZ1	Q06510	381 aa		4.11	□□□□□ -1.75
TRM8	YDL201W	YLR030W	Q07967	263 aa		4.11	□□□□□ -1.75
TRM8	YDL201W	EFG1	Q3E705	233 aa	Known RBP	4.11	□□□□□ -1.75
TRM8	YDL201W	YLR462W	O13556	202 aa		4.1	□□□□□ -1.75
TRM8	YDL201W	CMD1	P06787	147 aa	Known RBP	4.1	□□□□□ -1.75
TRM8	YDL201W	MET2	P08465	486 aa		4.1	□□□□□ -1.75
TRM8	YDL201W	COS2	P0CX12	379 aa		4.1	□□□□□ -1.75
TRM8	YDL201W	COS3	P0CX13	379 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms