RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 RAD51AP2Q09MP3 1159 aa18.72■□□□□ 0.59
PHGDH-234ENST00000642041 LY6KQ17RY6 165 aa18.72■□□□□ 0.59
PHGDH-234ENST00000642041 ANO5Q75V66 913 aa18.72■□□□□ 0.59
PHGDH-234ENST00000642041 NELFCDQ8IXH7 590 aa18.72■□□□□ 0.59
PHGDH-234ENST00000642041 CCDC170Q8IYT3 715 aa18.72■□□□□ 0.59
PHGDH-234ENST00000642041 SYN2Q92777 582 aaPredicted RBP18.72■□□□□ 0.59
PHGDH-234ENST00000642041 HPS3Q969F9 1004 aa18.72■□□□□ 0.59
PHGDH-234ENST00000642041 EMID1Q96A84 441 aaPredicted RBP18.72■□□□□ 0.59
PHGDH-234ENST00000642041 FBXL5Q9UKA1 691 aa18.72■□□□□ 0.59
PHGDH-234ENST00000642041 ATG2AQ2TAZ0 1938 aa18.72■□□□□ 0.59
PHGDH-234ENST00000642041 RALGAPA2Q2PPJ7 1873 aa18.71■□□□□ 0.59
PHGDH-234ENST00000642041 C5orf67F2Z3F1 127 aa18.71■□□□□ 0.59
PHGDH-234ENST00000642041 ASAP2O43150 1006 aa18.71■□□□□ 0.59
PHGDH-234ENST00000642041 RB1P06400 928 aa18.71■□□□□ 0.59
PHGDH-234ENST00000642041 KRT13P13646 458 aa18.71■□□□□ 0.59
PHGDH-234ENST00000642041 KRT9P35527 623 aa18.71■□□□□ 0.59
PHGDH-234ENST00000642041 POLGP54098 1239 aaPredicted RBP18.71■□□□□ 0.59
PHGDH-234ENST00000642041 PRKCEQ02156 737 aa18.71■□□□□ 0.59
PHGDH-234ENST00000642041 SP4Q02446 784 aa18.71■□□□□ 0.59
PHGDH-234ENST00000642041 MAPK7Q13164 816 aa18.71■□□□□ 0.59
PHGDH-234ENST00000642041 ADAM15Q13444 863 aa18.71■□□□□ 0.59
PHGDH-234ENST00000642041 MIIPQ5JXC2 388 aa18.71■□□□□ 0.59
PHGDH-234ENST00000642041 FAM102BQ5T8I3 360 aa18.71■□□□□ 0.59
PHGDH-234ENST00000642041 SLFN12LQ6IEE8 588 aa18.71■□□□□ 0.59
PHGDH-234ENST00000642041 INTS8Q75QN2 995 aaKnown RBP18.71■□□□□ 0.59
PHGDH-234ENST00000642041 HAUS6Q7Z4H7 955 aa18.71■□□□□ 0.59
PHGDH-234ENST00000642041 NEK11Q8NG66 645 aa18.71■□□□□ 0.59
PHGDH-234ENST00000642041 MSLNLQ96KJ4 702 aa18.71■□□□□ 0.59
PHGDH-234ENST00000642041 PRIMPOLQ96LW4 560 aa18.71■□□□□ 0.59
PHGDH-234ENST00000642041 FIZ1Q96SL8 496 aa18.71■□□□□ 0.59
PHGDH-234ENST00000642041 RRAGDQ9NQL2 400 aaPredicted RBP18.71■□□□□ 0.59
PHGDH-234ENST00000642041 KMT5AQ9NQR1 393 aa18.71■□□□□ 0.59
PHGDH-234ENST00000642041 DMAC2Q9NW81 257 aa18.71■□□□□ 0.59
PHGDH-234ENST00000642041 HDAC6Q9UBN7 1215 aa18.71■□□□□ 0.59
PHGDH-234ENST00000642041 SEPT9Q9UHD8 586 aaPredicted RBP18.71■□□□□ 0.59
PHGDH-234ENST00000642041 GALR2O43603 387 aaPredicted RBP18.7■□□□□ 0.58
PHGDH-234ENST00000642041 HBP1O60381 514 aa18.7■□□□□ 0.58
PHGDH-234ENST00000642041 AFPP02771 609 aaKnown RBP18.7■□□□□ 0.58
PHGDH-234ENST00000642041 MMP3P08254 477 aa18.7■□□□□ 0.58
PHGDH-234ENST00000642041 MYBP10242 640 aa18.7■□□□□ 0.58
PHGDH-234ENST00000642041 RFX1P22670 979 aa18.7■□□□□ 0.58
PHGDH-234ENST00000642041 CASP14P31944 242 aa18.7■□□□□ 0.58
PHGDH-234ENST00000642041 GTF2F1P35269 517 aaKnown RBP eCLIP18.7■□□□□ 0.58
PHGDH-234ENST00000642041 EFNA5P52803 228 aa18.7■□□□□ 0.58
PHGDH-234ENST00000642041 MCCD1P59942 119 aaPredicted RBP18.7■□□□□ 0.58
PHGDH-234ENST00000642041 CACNB1Q02641 598 aaPredicted RBP18.7■□□□□ 0.58
PHGDH-234ENST00000642041 ARHGAP1Q07960 439 aa18.7■□□□□ 0.58
PHGDH-234ENST00000642041 LRMPQ12912 555 aa18.7■□□□□ 0.58
PHGDH-234ENST00000642041 MXD4Q14582 209 aaPredicted RBP18.7■□□□□ 0.58
PHGDH-234ENST00000642041 PTPN14Q15678 1187 aa18.7■□□□□ 0.58
PHGDH-234ENST00000642041 CCAR2Q8N163 923 aaKnown RBP18.7■□□□□ 0.58
PHGDH-234ENST00000642041 C7orf31Q8N865 590 aa18.7■□□□□ 0.58
PHGDH-234ENST00000642041 AFG1LQ8WV93 481 aa18.7■□□□□ 0.58
PHGDH-234ENST00000642041 FAM81BQ96LP2 452 aa18.7■□□□□ 0.58
PHGDH-234ENST00000642041 SPATA33Q96N06 139 aa18.7■□□□□ 0.58
PHGDH-234ENST00000642041 DNAJC7Q99615 494 aa18.7■□□□□ 0.58
PHGDH-234ENST00000642041 C11orf84Q9BUA3 381 aaPredicted RBP18.7■□□□□ 0.58
PHGDH-234ENST00000642041 IGFLR1Q9H665 355 aa18.7■□□□□ 0.58
PHGDH-234ENST00000642041 DHX33Q9H6R0 707 aaKnown RBP18.7■□□□□ 0.58
PHGDH-234ENST00000642041 LUC7LQ9NQ29 371 aaKnown RBP18.7■□□□□ 0.58
PHGDH-234ENST00000642041 CACNA1GO43497 2377 aa18.7■□□□□ 0.58
PHGDH-234ENST00000642041 TPRP12270 2363 aaKnown RBP18.69■□□□□ 0.58
PHGDH-234ENST00000642041 RSPH10B2B2RC85 870 aa18.69■□□□□ 0.58
PHGDH-234ENST00000642041 RBAK-RBAKDNI3L0D1 243 aa18.69■□□□□ 0.58
PHGDH-234ENST00000642041 PMM2O15305 246 aa18.69■□□□□ 0.58
PHGDH-234ENST00000642041 LINC01565O15544 149 aa18.69■□□□□ 0.58
PHGDH-234ENST00000642041 PPFIA4O75335 1185 aa18.69■□□□□ 0.58
PHGDH-234ENST00000642041 STBD1O95210 358 aa18.69■□□□□ 0.58
PHGDH-234ENST00000642041 GYPCP04921 128 aa18.69■□□□□ 0.58
PHGDH-234ENST00000642041 CCDC175P0C221 793 aa18.69■□□□□ 0.58
PHGDH-234ENST00000642041 CCDC172P0C7W6 258 aa18.69■□□□□ 0.58
PHGDH-234ENST00000642041 RSPH10BP0C881 870 aa18.69■□□□□ 0.58
PHGDH-234ENST00000642041 HNRNPH3P31942 346 aaKnown RBP18.69■□□□□ 0.58
PHGDH-234ENST00000642041 CYLC1P35663 651 aaPredicted RBP18.69■□□□□ 0.58
PHGDH-234ENST00000642041 NAMPTP43490 491 aa18.69■□□□□ 0.58
PHGDH-234ENST00000642041 KRT83P78385 493 aa18.69■□□□□ 0.58
PHGDH-234ENST00000642041 CDC42EP1Q00587 391 aa18.69■□□□□ 0.58
PHGDH-234ENST00000642041 SYCP1Q15431 976 aa18.69■□□□□ 0.58
PHGDH-234ENST00000642041 PLEKHG4Q58EX7 1191 aa18.69■□□□□ 0.58
PHGDH-234ENST00000642041 IER5Q5VY09 327 aa18.69■□□□□ 0.58
PHGDH-234ENST00000642041 CCDC60Q8IWA6 550 aaPredicted RBP18.69■□□□□ 0.58
PHGDH-234ENST00000642041 ZNF710Q8N1W2 664 aa18.69■□□□□ 0.58
PHGDH-234ENST00000642041 PPTC7Q8NI37 304 aa18.69■□□□□ 0.58
PHGDH-234ENST00000642041 WNT8BQ93098 351 aa18.69■□□□□ 0.58
PHGDH-234ENST00000642041 TMEM134Q9H6X4 195 aa18.69■□□□□ 0.58
PHGDH-234ENST00000642041 PLCB1Q9NQ66 1216 aa18.69■□□□□ 0.58
PHGDH-234ENST00000642041 ABHD10Q9NUJ1 306 aa18.69■□□□□ 0.58
PHGDH-234ENST00000642041 BZW2Q9Y6E2 419 aaKnown RBP18.69■□□□□ 0.58
PHGDH-234ENST00000642041 GSTTP1A0A1W2PQM5 241 aa18.68■□□□□ 0.58
PHGDH-234ENST00000642041 GRM6O15303 877 aa18.68■□□□□ 0.58
PHGDH-234ENST00000642041 MAGEB2O15479 319 aa18.68■□□□□ 0.58
PHGDH-234ENST00000642041 UPP2O95045 317 aa18.68■□□□□ 0.58
PHGDH-234ENST00000642041 LDHAP00338 332 aaKnown RBP18.68■□□□□ 0.58
PHGDH-234ENST00000642041 GARTP22102 1010 aa18.68■□□□□ 0.58
PHGDH-234ENST00000642041 ANXA13P27216 316 aa18.68■□□□□ 0.58
PHGDH-234ENST00000642041 NMT1P30419 496 aaKnown RBP18.68■□□□□ 0.58
PHGDH-234ENST00000642041 CTNNB1P35222 781 aa18.68■□□□□ 0.58
PHGDH-234ENST00000642041 TCF7P36402 384 aaPredicted RBP18.68■□□□□ 0.58
PHGDH-234ENST00000642041 STRN3Q13033 797 aa18.68■□□□□ 0.58
PHGDH-234ENST00000642041 MAP4K3Q8IVH8 894 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms