RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	NCOR2	Q9Y618	2525 aa		11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	CASTOR2	A6NHX0	329 aa		11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	CCL16	O15467	120 aa		11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	ASAP2	O43150	1006 aa		11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	DKC1	O60832	514 aa	Known RBP eCLIP	11.08	□□□□□ -0.64	1e-16	■■■■■ 39.7
PHGDH-222	ENST00000641587	ZMYND10	O75800	440 aa		11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	CD72	P21854	359 aa		11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	GLRA2	P23416	452 aa		11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	FSHR	P23945	695 aa		11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	AXL	P30530	894 aa		11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	SNW1	Q13573	536 aa	Known RBP	11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	USP41	Q3LFD5	358 aa		11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	PPP4R3A	Q6IN85	833 aa		11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	FAM173B	Q6P4H8	233 aa		11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	TPH2	Q8IWU9	490 aa		11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	SUMF1	Q8NBK3	374 aa		11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	HDAC7	Q8WUI4	952 aa		11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	CCDC51	Q96ER9	411 aa		11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	ZNF396	Q96N95	335 aa	Predicted RBP	11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	GBP4	Q96PP9	640 aa		11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	SEMA4A	Q9H3S1	761 aa		11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	FNIP2	Q9P278	1114 aa		11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	PARP2	Q9UGN5	583 aa		11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	FBXW11	Q9UKB1	542 aa		11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	NOL7	Q9UMY1	257 aa	Known RBP	11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	PPME1	Q9Y570	386 aa		11.08	□□□□□ -0.64
PHGDH-222	ENST00000641587	TTLL13P	A6NNM8	815 aa		11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	MARCH6	O60337	910 aa		11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	NR1I2	O75469	434 aa		11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	SLITRK3	O94933	977 aa		11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	KIF4A	O95239	1232 aa		11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	C8A	P07357	584 aa		11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	GCFC2	P16383	781 aa	Known RBP	11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	ATP2B1	P20020	1258 aa		11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	IGFBP6	P24592	240 aa	Predicted RBP	11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	U2AF2	P26368	475 aa	Known RBP eCLIP	11.07	□□□□□ -0.64	4e-10	■■□□□ 11.5
PHGDH-222	ENST00000641587	ARL2	P36404	184 aa		11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	STARD6	P59095	220 aa		11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	DNM1	Q05193	864 aa	Known RBP	11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	GRIK3	Q13003	919 aa		11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	ZC3H14	Q6PJT7	736 aa	Known RBP	11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	MAEA	Q7L5Y9	396 aa		11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	OTUD6A	Q7L8S5	288 aa		11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	CEP57	Q86XR8	500 aa		11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	EXOC8	Q8IYI6	725 aa		11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	ITFG1	Q8TB96	612 aa		11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	RUBCN	Q92622	972 aa		11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	FGF13	Q92913	245 aa		11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	CHAMP1	Q96JM3	812 aa		11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	KXD1	Q9BQD3	176 aa		11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	CLSTN3	Q9BQT9	956 aa		11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	ZSWIM4	Q9H7M6	989 aa		11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	GPRC5C	Q9NQ84	441 aa		11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	HCFC1R1	Q9NWW0	138 aa		11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	CDH7	Q9ULB5	785 aa		11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	POLI	Q9UNA4	740 aa		11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	USP20	Q9Y2K6	914 aa		11.07	□□□□□ -0.64
PHGDH-222	ENST00000641587	WNT7A	O00755	349 aa		11.06	□□□□□ -0.64
PHGDH-222	ENST00000641587	PTGES	O14684	152 aa		11.06	□□□□□ -0.64
PHGDH-222	ENST00000641587	USO1	O60763	962 aa	Known RBP	11.06	□□□□□ -0.64
PHGDH-222	ENST00000641587	TADA2A	O75478	443 aa		11.06	□□□□□ -0.64
PHGDH-222	ENST00000641587	KRT85	P78386	507 aa		11.06	□□□□□ -0.64
PHGDH-222	ENST00000641587	CEBPZ	Q03701	1054 aa	Known RBP	11.06	□□□□□ -0.64
PHGDH-222	ENST00000641587	TFDP1	Q14186	410 aa		11.06	□□□□□ -0.64
PHGDH-222	ENST00000641587	MXD4	Q14582	209 aa	Predicted RBP	11.06	□□□□□ -0.64
PHGDH-222	ENST00000641587	PUM1	Q14671	1186 aa	Known RBP eCLIP	11.06	□□□□□ -0.64
PHGDH-222	ENST00000641587	UBXN2B	Q14CS0	331 aa		11.06	□□□□□ -0.64
PHGDH-222	ENST00000641587	MLF2	Q15773	248 aa	Predicted RBP	11.06	□□□□□ -0.64
PHGDH-222	ENST00000641587	PSMD5	Q16401	504 aa		11.06	□□□□□ -0.64
PHGDH-222	ENST00000641587	PPM1L	Q5SGD2	360 aa		11.06	□□□□□ -0.64
PHGDH-222	ENST00000641587	FAM171A1	Q5VUB5	890 aa		11.06	□□□□□ -0.64
PHGDH-222	ENST00000641587	SLC27A1	Q6PCB7	646 aa		11.06	□□□□□ -0.64
PHGDH-222	ENST00000641587	POTEH	Q6S545	545 aa		11.06	□□□□□ -0.64
PHGDH-222	ENST00000641587	LNX1	Q8TBB1	728 aa	Predicted RBP	11.06	□□□□□ -0.64
PHGDH-222	ENST00000641587	PIGO	Q8TEQ8	1089 aa		11.06	□□□□□ -0.64
PHGDH-222	ENST00000641587	ING5	Q8WYH8	240 aa		11.06	□□□□□ -0.64
PHGDH-222	ENST00000641587	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.06	□□□□□ -0.64
PHGDH-222	ENST00000641587	SPATA6	Q9NWH7	488 aa	Predicted RBP	11.06	□□□□□ -0.64
PHGDH-222	ENST00000641587	DLL3	Q9NYJ7	618 aa		11.06	□□□□□ -0.64
PHGDH-222	ENST00000641587	SPTBN2	O15020	2390 aa		11.06	□□□□□ -0.64
PHGDH-222	ENST00000641587	SF3B1	O75533	1304 aa	Known RBP eCLIP	11.06	□□□□□ -0.64	8e-6	■■■■■ 107
PHGDH-222	ENST00000641587	KANSL1L	A0AUZ9	987 aa		11.05	□□□□□ -0.64
PHGDH-222	ENST00000641587	LRRIQ4	A6NIV6	560 aa		11.05	□□□□□ -0.64
PHGDH-222	ENST00000641587	GOLGA6L22	H0YM25	854 aa		11.05	□□□□□ -0.64
PHGDH-222	ENST00000641587	TBX3	O15119	743 aa		11.05	□□□□□ -0.64
PHGDH-222	ENST00000641587	KIN	O60870	393 aa	Known RBP	11.05	□□□□□ -0.64
PHGDH-222	ENST00000641587	BAG4	O95429	457 aa	Known RBP	11.05	□□□□□ -0.64
PHGDH-222	ENST00000641587	EDN1	P05305	212 aa		11.05	□□□□□ -0.64
PHGDH-222	ENST00000641587	RARRES1	P49788	294 aa		11.05	□□□□□ -0.64
PHGDH-222	ENST00000641587	NCBP1	Q09161	790 aa	Known RBP	11.05	□□□□□ -0.64
PHGDH-222	ENST00000641587	TUSC3	Q13454	348 aa		11.05	□□□□□ -0.64
PHGDH-222	ENST00000641587	PCBP1	Q15365	356 aa	Known RBP eCLIP	11.05	□□□□□ -0.64	2e-6	■■■□□ 14.6
PHGDH-222	ENST00000641587	RSPO4	Q2I0M5	234 aa	Predicted RBP	11.05	□□□□□ -0.64
PHGDH-222	ENST00000641587	RILPL1	Q5EBL4	403 aa		11.05	□□□□□ -0.64
PHGDH-222	ENST00000641587	LIN9	Q5TKA1	542 aa		11.05	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms