RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 MYO9BQ13459 2157 aa6.64□□□□□ -1.35
CDKL5-205ENST00000623535 BASP1P80723 227 aaKnown RBP6.64□□□□□ -1.35
CDKL5-205ENST00000623535 TFDP2Q14188 446 aa6.64□□□□□ -1.35
CDKL5-205ENST00000623535 TAF13Q15543 124 aa6.64□□□□□ -1.35
CDKL5-205ENST00000623535 KCTD1Q719H9 257 aa6.64□□□□□ -1.35
CDKL5-205ENST00000623535 NOSTRINQ8IVI9 506 aa6.64□□□□□ -1.35
CDKL5-205ENST00000623535 PANX2Q96RD6 677 aa6.64□□□□□ -1.35
CDKL5-205ENST00000623535 TRIM31Q9BZY9 425 aa6.64□□□□□ -1.35
CDKL5-205ENST00000623535 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.64□□□□□ -1.35
CDKL5-205ENST00000623535 PPP2R3BQ9Y5P8 575 aa6.64□□□□□ -1.35
CDKL5-205ENST00000623535 A0A0J9YVX5 310 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 MOCS2O96007 188 aaPredicted RBP6.63□□□□□ -1.35
CDKL5-205ENST00000623535 SCP2P22307 547 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 SPP2Q13103 211 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 EIF4A2Q14240 407 aaKnown RBP6.63□□□□□ -1.35
CDKL5-205ENST00000623535 LRRC8CQ8TDW0 803 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 SCFD2Q8WU76 684 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 NELFBQ8WX92 580 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 RRAGCQ9HB90 399 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 MCCC2Q9HCC0 563 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 KIAA1024Q9UPX6 916 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 ARAP3Q8WWN8 1544 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 PFKFB2O60825 505 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 PCCAP05165 728 aaPredicted RBP6.63□□□□□ -1.35
CDKL5-205ENST00000623535 SLC2A4P14672 509 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 ZNF697Q5TEC3 545 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 CREB3L3Q68CJ9 461 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 FAAH2Q6GMR7 532 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 POTEEQ6S8J3 1075 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 VASH1Q7L8A9 365 aaPredicted RBP6.63□□□□□ -1.35
CDKL5-205ENST00000623535 LYSMD3Q7Z3D4 306 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 ADNPQ9H2P0 1102 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 CDH7Q9ULB5 785 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.63□□□□□ -1.35
CDKL5-205ENST00000623535 A8MXQ7 604 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 WWP2O00308 870 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 NDUFS3O75489 264 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 FGAP02671 866 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 KCNA2P16389 499 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 CDH2P19022 906 aaPredicted RBP6.63□□□□□ -1.35
CDKL5-205ENST00000623535 GYG1P46976 350 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 RPP38P78345 283 aaKnown RBP6.63□□□□□ -1.35
CDKL5-205ENST00000623535 ZNF177Q13360 481 aaPredicted RBP6.63□□□□□ -1.35
CDKL5-205ENST00000623535 ZC2HC1CQ53FD0 456 aaPredicted RBP6.63□□□□□ -1.35
CDKL5-205ENST00000623535 SCARA5Q6ZMJ2 495 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 KIAA1143Q96AT1 154 aaPredicted RBP6.63□□□□□ -1.35
CDKL5-205ENST00000623535 KLHL25Q9H0H3 589 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 OSGEPL1Q9H4B0 414 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 SLC32A1Q9H598 525 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 NGRNQ9NPE2 291 aaKnown RBP6.63□□□□□ -1.35
CDKL5-205ENST00000623535 MYPNQ86TC9 1320 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 GCATO75600 419 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 ITGB6P18564 788 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 PPM1AP35813 382 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 CTCFP49711 727 aaPredicted RBP6.63□□□□□ -1.35
CDKL5-205ENST00000623535 LONRF3Q496Y0 759 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 ATP6V0D2Q8N8Y2 350 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 ZNF280CQ8ND82 737 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 FRMD8Q9BZ67 464 aaPredicted RBP6.63□□□□□ -1.35
CDKL5-205ENST00000623535 FIS1Q9Y3D6 152 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 ZMYM2Q9UBW7 1377 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 IQANK1A0A1B0GTG1 560 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 ERVV-1B6SEH8 477 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 DFFAO00273 331 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 NUDT14O95848 222 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 ATP5BP06576 529 aaKnown RBP6.63□□□□□ -1.35
CDKL5-205ENST00000623535 RAB27AP51159 221 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 DHX9Q08211 1270 aaKnown RBP6.63□□□□□ -1.35
CDKL5-205ENST00000623535 PASD1Q8IV76 773 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 GJA10Q969M2 543 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 HAPLN3Q96S86 360 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 ORAI2Q96SN7 254 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 TBCDQ9BTW9 1192 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 SPATA9Q9BWV2 254 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 INTS7Q9NVH2 962 aaKnown RBP6.63□□□□□ -1.35
CDKL5-205ENST00000623535 NKRFO15226 690 aaKnown RBP eCLIP6.63□□□□□ -1.35
CDKL5-205ENST00000623535 ANXA5P08758 320 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 MAP2K5Q13163 448 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 MORF4L2Q15014 288 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 BROXQ5VW32 411 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 PLEKHH3Q7Z736 793 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 DIS3L2Q8IYB7 885 aaKnown RBP6.63□□□□□ -1.35
CDKL5-205ENST00000623535 FAM13CQ8NE31 585 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 OR6P1Q8NGX9 317 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 BSNDQ8WZ55 320 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 UBE2OQ9C0C9 1292 aaKnown RBP6.63□□□□□ -1.35
CDKL5-205ENST00000623535 TJP3O95049 919 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 BMP2KLQ5H9B9 411 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 ACAD11Q709F0 780 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 MARK2Q7KZI7 788 aaKnown RBP6.63□□□□□ -1.35
CDKL5-205ENST00000623535 COMMD2Q86X83 199 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 POTEDQ86YR6 584 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 TNIP2Q8NFZ5 429 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 DTX3LQ8TDB6 740 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 POP1Q99575 1024 aaKnown RBP6.63□□□□□ -1.35
CDKL5-205ENST00000623535 USB1Q9BQ65 265 aaKnown RBP6.63□□□□□ -1.35
CDKL5-205ENST00000623535 PHACTR1Q9C0D0 580 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 IRF2BPLQ9H1B7 796 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 MARK1Q9P0L2 795 aa6.63□□□□□ -1.35
CDKL5-205ENST00000623535 KDM6BO15054 1643 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms