RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 C8orf76Q96K31 380 aa19.69■□□□□ 0.74
SMN2-213ENST00000614240 ARHGEF3Q9NR81 526 aa19.69■□□□□ 0.74
SMN2-213ENST00000614240 CCL16O15467 120 aa19.68■□□□□ 0.74
SMN2-213ENST00000614240 EIF5BO60841 1220 aaKnown RBP19.68■□□□□ 0.74
SMN2-213ENST00000614240 C8AP07357 584 aa19.68■□□□□ 0.74
SMN2-213ENST00000614240 DCAF4L1Q3SXM0 396 aa19.68■□□□□ 0.74
SMN2-213ENST00000614240 HAUS3Q68CZ6 603 aa19.68■□□□□ 0.74
SMN2-213ENST00000614240 DCLRE1AQ6PJP8 1040 aa19.68■□□□□ 0.74
SMN2-213ENST00000614240 CDH7Q9ULB5 785 aa19.68■□□□□ 0.74
SMN2-213ENST00000614240 SIT1Q9Y3P8 196 aa19.68■□□□□ 0.74
SMN2-213ENST00000614240 CCT6AP40227 531 aaKnown RBP19.67■□□□□ 0.74
SMN2-213ENST00000614240 EFNA5P52803 228 aa19.67■□□□□ 0.74
SMN2-213ENST00000614240 NTHL1P78549 312 aa19.67■□□□□ 0.74
SMN2-213ENST00000614240 EEF1DP3Q658K8 133 aa19.67■□□□□ 0.74
SMN2-213ENST00000614240 PHLDB3Q6NSJ2 640 aa19.67■□□□□ 0.74
SMN2-213ENST00000614240 CCDC113Q9H0I3 377 aa19.67■□□□□ 0.74
SMN2-213ENST00000614240 CXCL16Q9H2A7 254 aa19.67■□□□□ 0.74
SMN2-213ENST00000614240 POLD4Q9HCU8 107 aa19.67■□□□□ 0.74
SMN2-213ENST00000614240 SLC2A4RGQ9NR83 387 aa19.67■□□□□ 0.74
SMN2-213ENST00000614240 B3GAT3O94766 335 aa19.66■□□□□ 0.74
SMN2-213ENST00000614240 DCNP07585 359 aaKnown RBP19.66■□□□□ 0.74
SMN2-213ENST00000614240 OR1D2P34982 312 aa19.66■□□□□ 0.74
SMN2-213ENST00000614240 ORC2Q13416 577 aaPredicted RBP19.66■□□□□ 0.74
SMN2-213ENST00000614240 TTC38Q5R3I4 469 aa19.66■□□□□ 0.74
SMN2-213ENST00000614240 ATF7IP2Q5U623 682 aa19.66■□□□□ 0.74
SMN2-213ENST00000614240 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.66■□□□□ 0.74
SMN2-213ENST00000614240 SLC7A14Q8TBB6 771 aa19.66■□□□□ 0.74
SMN2-213ENST00000614240 SHDQ96IW2 340 aa19.66■□□□□ 0.74
SMN2-213ENST00000614240 KIFC3Q9BVG8 833 aa19.66■□□□□ 0.74
SMN2-213ENST00000614240 ADAM12O43184 909 aa19.65■□□□□ 0.74
SMN2-213ENST00000614240 MUTP22033 750 aa19.65■□□□□ 0.74
SMN2-213ENST00000614240 HOXA9P31269 272 aa19.65■□□□□ 0.74
SMN2-213ENST00000614240 GPC5P78333 572 aa19.65■□□□□ 0.74
SMN2-213ENST00000614240 GLRA4Q5JXX5 417 aa19.65■□□□□ 0.74
SMN2-213ENST00000614240 AXDND1Q5T1B0 1012 aaPredicted RBP19.65■□□□□ 0.74
SMN2-213ENST00000614240 PARM1Q6UWI2 310 aa19.65■□□□□ 0.74
SMN2-213ENST00000614240 MTSS1LQ765P7 747 aa19.65■□□□□ 0.74
SMN2-213ENST00000614240 CCDC83Q8IWF9 413 aa19.65■□□□□ 0.74
SMN2-213ENST00000614240 KIFAP3Q92845 792 aa19.65■□□□□ 0.74
SMN2-213ENST00000614240 RPP25Q9BUL9 199 aaKnown RBP19.65■□□□□ 0.74
SMN2-213ENST00000614240 BHMT2Q9H2M3 363 aa19.65■□□□□ 0.74
SMN2-213ENST00000614240 FOXP1Q9H334 677 aaPredicted RBP19.65■□□□□ 0.74
SMN2-213ENST00000614240 SEMA4AQ9H3S1 761 aa19.65■□□□□ 0.74
SMN2-213ENST00000614240 LIMCH1Q9UPQ0 1083 aa19.65■□□□□ 0.74
SMN2-213ENST00000614240 K7ERI5 159 aa19.64■□□□□ 0.73
SMN2-213ENST00000614240 TRAPPC3O43617 180 aa19.64■□□□□ 0.73
SMN2-213ENST00000614240 YARSP54577 528 aaKnown RBP19.64■□□□□ 0.73
SMN2-213ENST00000614240 FOXK2Q01167 660 aa19.64■□□□□ 0.73
SMN2-213ENST00000614240 ST3GAL1Q11201 340 aa19.64■□□□□ 0.73
SMN2-213ENST00000614240 RAB33AQ14088 237 aa19.64■□□□□ 0.73
SMN2-213ENST00000614240 NAB2Q15742 525 aa19.64■□□□□ 0.73
SMN2-213ENST00000614240 FGF13Q92913 245 aa19.64■□□□□ 0.73
SMN2-213ENST00000614240 FGF14Q92915 247 aa19.64■□□□□ 0.73
SMN2-213ENST00000614240 UROC1Q96N76 676 aa19.64■□□□□ 0.73
SMN2-213ENST00000614240 DAXXQ9UER7 740 aaPredicted RBP19.64■□□□□ 0.73
SMN2-213ENST00000614240 LRWD1Q9UFC0 647 aa19.64■□□□□ 0.73
SMN2-213ENST00000614240 NOL7Q9UMY1 257 aaKnown RBP19.64■□□□□ 0.73
SMN2-213ENST00000614240 KIAA1024Q9UPX6 916 aa19.64■□□□□ 0.73
SMN2-213ENST00000614240 RIF1Q5UIP0 2472 aaKnown RBP19.64■□□□□ 0.73
SMN2-213ENST00000614240 CCDC169A6NNP5 214 aa19.63■□□□□ 0.73
SMN2-213ENST00000614240 LMNAP02545 664 aaKnown RBP19.63■□□□□ 0.73
SMN2-213ENST00000614240 EDN1P05305 212 aa19.63■□□□□ 0.73
SMN2-213ENST00000614240 FGFR3P22607 806 aa19.63■□□□□ 0.73
SMN2-213ENST00000614240 RBM25P49756 843 aaKnown RBP19.63■□□□□ 0.73
SMN2-213ENST00000614240 CLCNKBP51801 687 aa19.63■□□□□ 0.73
SMN2-213ENST00000614240 UVSSAQ2YD98 709 aa19.63■□□□□ 0.73
SMN2-213ENST00000614240 NT5DC1Q5TFE4 455 aa19.63■□□□□ 0.73
SMN2-213ENST00000614240 FAM184AQ8NB25 1140 aa19.63■□□□□ 0.73
SMN2-213ENST00000614240 ITFG1Q8TB96 612 aa19.63■□□□□ 0.73
SMN2-213ENST00000614240 LLPHQ9BRT6 129 aaKnown RBP19.63■□□□□ 0.73
SMN2-213ENST00000614240 CCDC94Q9BW85 323 aaPredicted RBP19.63■□□□□ 0.73
SMN2-213ENST00000614240 FOXQ1Q9C009 403 aa19.63■□□□□ 0.73
SMN2-213ENST00000614240 MTRRQ9UBK8 725 aa19.63■□□□□ 0.73
SMN2-213ENST00000614240 CDY1Q9Y6F8 540 aa19.63■□□□□ 0.73
SMN2-213ENST00000614240 R4GN57 208 aa19.63■□□□□ 0.73
SMN2-213ENST00000614240 MTCL1Q9Y4B5 1905 aaKnown RBP19.63■□□□□ 0.73
SMN2-213ENST00000614240 TMEM189-UBE2V1I3L0A0 370 aa19.62■□□□□ 0.73
SMN2-213ENST00000614240 SNW1Q13573 536 aaKnown RBP19.62■□□□□ 0.73
SMN2-213ENST00000614240 PABPC1LQ4VXU2 614 aaKnown RBP19.62■□□□□ 0.73
SMN2-213ENST00000614240 ZC3H14Q6PJT7 736 aaKnown RBP19.62■□□□□ 0.73
SMN2-213ENST00000614240 ANKS3Q6ZW76 656 aa19.62■□□□□ 0.73
SMN2-213ENST00000614240 C1orf210Q8IVY1 113 aa19.62■□□□□ 0.73
SMN2-213ENST00000614240 PPP1R10Q96QC0 940 aaKnown RBP19.62■□□□□ 0.73
SMN2-213ENST00000614240 RAB34Q9BZG1 259 aa19.62■□□□□ 0.73
SMN2-213ENST00000614240 TOPORSQ9NS56 1045 aaPredicted RBP19.62■□□□□ 0.73
SMN2-213ENST00000614240 DDX19AQ9NUU7 478 aaKnown RBP19.62■□□□□ 0.73
SMN2-213ENST00000614240 HCFC1R1Q9NWW0 138 aa19.62■□□□□ 0.73
SMN2-213ENST00000614240 PPP4R2Q9NY27 417 aa19.62■□□□□ 0.73
SMN2-213ENST00000614240 TNFSF13BQ9Y275 285 aa19.62■□□□□ 0.73
SMN2-213ENST00000614240 STK24Q9Y6E0 443 aa19.62■□□□□ 0.73
SMN2-213ENST00000614240 FAM186AA6NE01 2351 aa19.62■□□□□ 0.73
SMN2-213ENST00000614240 TKTP29401 623 aaKnown RBP19.61■□□□□ 0.73
SMN2-213ENST00000614240 ID4P47928 161 aa19.61■□□□□ 0.73
SMN2-213ENST00000614240 TRAPPC10P48553 1259 aa19.61■□□□□ 0.73
SMN2-213ENST00000614240 FXR2P51116 673 aaKnown RBP eCLIP19.61■□□□□ 0.73
SMN2-213ENST00000614240 STARD6P59095 220 aa19.61■□□□□ 0.73
SMN2-213ENST00000614240 OSTNP61366 133 aa19.61■□□□□ 0.73
SMN2-213ENST00000614240 ECM1Q16610 540 aa19.61■□□□□ 0.73
SMN2-213ENST00000614240 FBXO18Q8NFZ0 1043 aa19.61■□□□□ 0.73
SMN2-213ENST00000614240 PJA1Q8NG27 643 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms