RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 CMASQ8NFW8 434 aaPredicted RBP11.53□□□□□ -0.56
CCDC9-203ENST00000596938 RABGGTAQ92696 567 aa11.53□□□□□ -0.56
CCDC9-203ENST00000596938 EPSTI1Q96J88 318 aa11.53□□□□□ -0.56
CCDC9-203ENST00000596938 RPGRIP1Q96KN7 1286 aa11.53□□□□□ -0.56
CCDC9-203ENST00000596938 UROC1Q96N76 676 aa11.53□□□□□ -0.56
CCDC9-203ENST00000596938 ACAP3Q96P50 834 aa11.53□□□□□ -0.56
CCDC9-203ENST00000596938 REEP2Q9BRK0 252 aa11.53□□□□□ -0.56
CCDC9-203ENST00000596938 APOL5Q9BWW9 433 aa11.53□□□□□ -0.56
CCDC9-203ENST00000596938 NR2E1Q9Y466 385 aa11.53□□□□□ -0.56
CCDC9-203ENST00000596938 GTF3C3Q9Y5Q9 886 aa11.53□□□□□ -0.56
CCDC9-203ENST00000596938 SF3B1O75533 1304 aaKnown RBP eCLIP11.53□□□□□ -0.56
CCDC9-203ENST00000596938 TRIOO75962 3097 aa11.52□□□□□ -0.56
CCDC9-203ENST00000596938 CASTOR2A6NHX0 329 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 PRR33A8MZF0 331 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 TMEM189-UBE2V1I3L0A0 370 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 CLDN3O15551 220 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 PAPLNO95428 1278 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 KCNE1P15382 129 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 ABCD1P33897 745 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 CACNB1Q02641 598 aaPredicted RBP11.52□□□□□ -0.57
CCDC9-203ENST00000596938 MCL1Q07820 350 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 DHX8Q14562 1220 aaKnown RBP11.52□□□□□ -0.57
CCDC9-203ENST00000596938 UPP1Q16831 310 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 RARS2Q5T160 578 aaKnown RBP11.52□□□□□ -0.57
CCDC9-203ENST00000596938 PDXDC1Q6P996 788 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 LILRA6Q6PI73 481 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 ELMSAN1Q6PJG2 1045 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 CYP26C1Q6V0L0 522 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 C15orf39Q6ZRI6 1047 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 USP49Q70CQ1 688 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 GPR149Q86SP6 731 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 ZBTB33Q86T24 672 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 MYCT1Q8N699 235 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 CEP120Q8N960 986 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 RASSF8Q8NHQ8 419 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 RIN2Q8WYP3 895 aaPredicted RBP11.52□□□□□ -0.57
CCDC9-203ENST00000596938 LARP4BQ92615 738 aaKnown RBP11.52□□□□□ -0.57
CCDC9-203ENST00000596938 EDAQ92838 391 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 DDX27Q96GQ7 796 aaKnown RBP11.52□□□□□ -0.57
CCDC9-203ENST00000596938 ZBTB45Q96K62 511 aaPredicted RBP11.52□□□□□ -0.57
CCDC9-203ENST00000596938 USP28Q96RU2 1077 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 TTPALQ9BTX7 342 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 RHOBTB2Q9BYZ6 727 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 PLEKHA4Q9H4M7 779 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 SFXN1Q9H9B4 322 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 PARVGQ9HBI0 331 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 FOXD4L1Q9NU39 408 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 SLC38A7Q9NVC3 462 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 CACNG4Q9UBN1 327 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 STK17AQ9UEE5 414 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 CCDC39Q9UFE4 941 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 TBX20Q9UMR3 447 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 ATG2AQ2TAZ0 1938 aa11.52□□□□□ -0.57
CCDC9-203ENST00000596938 TRAK2O60296 914 aa11.51□□□□□ -0.57
CCDC9-203ENST00000596938 B3GAT3O94766 335 aa11.51□□□□□ -0.57
CCDC9-203ENST00000596938 FAM13AO94988 1023 aa11.51□□□□□ -0.57
CCDC9-203ENST00000596938 KIF4AO95239 1232 aa11.51□□□□□ -0.57
CCDC9-203ENST00000596938 GLUD1P00367 558 aa11.51□□□□□ -0.57
CCDC9-203ENST00000596938 KRT18P05783 430 aaKnown RBP11.51□□□□□ -0.57
CCDC9-203ENST00000596938 COL9A1P20849 921 aa11.51□□□□□ -0.57
CCDC9-203ENST00000596938 RPL9P32969 192 aaKnown RBP11.51□□□□□ -0.57
CCDC9-203ENST00000596938 NASPP49321 788 aaPredicted RBP11.51□□□□□ -0.57
CCDC9-203ENST00000596938 CLCNKBP51801 687 aa11.51□□□□□ -0.57
CCDC9-203ENST00000596938 OSTNP61366 133 aa11.51□□□□□ -0.57
CCDC9-203ENST00000596938 CEBPZQ03701 1054 aaKnown RBP11.51□□□□□ -0.57
CCDC9-203ENST00000596938 KYAT1Q16773 422 aa11.51□□□□□ -0.57
CCDC9-203ENST00000596938 SPECC1Q5M775 1068 aa11.51□□□□□ -0.57
CCDC9-203ENST00000596938 FAM171A1Q5VUB5 890 aa11.51□□□□□ -0.57
CCDC9-203ENST00000596938 RRAGBQ5VZM2 374 aa11.51□□□□□ -0.57
CCDC9-203ENST00000596938 KANK3Q6NY19 840 aa11.51□□□□□ -0.57
CCDC9-203ENST00000596938 CD300LGQ6UXG3 332 aa11.51□□□□□ -0.57
CCDC9-203ENST00000596938 TMC5Q6UXY8 1006 aa11.51□□□□□ -0.57
CCDC9-203ENST00000596938 KRI1Q8N9T8 703 aaKnown RBP11.51□□□□□ -0.57
CCDC9-203ENST00000596938 LNX1Q8TBB1 728 aaPredicted RBP11.51□□□□□ -0.57
CCDC9-203ENST00000596938 PIK3R5Q8WYR1 880 aa11.51□□□□□ -0.57
CCDC9-203ENST00000596938 B3GALT6Q96L58 329 aa11.51□□□□□ -0.57
CCDC9-203ENST00000596938 ZMAT2Q96NC0 199 aaKnown RBP11.51□□□□□ -0.57
CCDC9-203ENST00000596938 CLIC6Q96NY7 704 aa11.51□□□□□ -0.57
CCDC9-203ENST00000596938 POMKQ9H5K3 350 aa11.51□□□□□ -0.57
CCDC9-203ENST00000596938 PLEKHA5Q9HAU0 1116 aa11.51□□□□□ -0.57
CCDC9-203ENST00000596938 CNTN3Q9P232 1028 aa11.51□□□□□ -0.57
CCDC9-203ENST00000596938 MUTYHQ9UIF7 546 aa11.51□□□□□ -0.57
CCDC9-203ENST00000596938 USTQ9Y2C2 406 aa11.51□□□□□ -0.57
CCDC9-203ENST00000596938 FAM86C2PA6NEL3 165 aa11.5□□□□□ -0.57
CCDC9-203ENST00000596938 TGM5O43548 720 aa11.5□□□□□ -0.57
CCDC9-203ENST00000596938 TRAPPC3O43617 180 aa11.5□□□□□ -0.57
CCDC9-203ENST00000596938 PIGRP01833 764 aa11.5□□□□□ -0.57
CCDC9-203ENST00000596938 CLTAP09496 248 aa11.5□□□□□ -0.57
CCDC9-203ENST00000596938 FGFR3P22607 806 aa11.5□□□□□ -0.57
CCDC9-203ENST00000596938 TXLNAP40222 546 aa11.5□□□□□ -0.57
CCDC9-203ENST00000596938 GTF2BQ00403 316 aa11.5□□□□□ -0.57
CCDC9-203ENST00000596938 NOLC1Q14978 699 aaKnown RBP eCLIP11.5□□□□□ -0.57
CCDC9-203ENST00000596938 SLC10A6Q3KNW5 377 aa11.5□□□□□ -0.57
CCDC9-203ENST00000596938 GLRA4Q5JXX5 417 aa11.5□□□□□ -0.57
CCDC9-203ENST00000596938 RTP2Q5QGT7 225 aa11.5□□□□□ -0.57
CCDC9-203ENST00000596938 PALB2Q86YC2 1186 aa11.5□□□□□ -0.57
CCDC9-203ENST00000596938 HSCBQ8IWL3 235 aa11.5□□□□□ -0.57
CCDC9-203ENST00000596938 ZDHHC14Q8IZN3 488 aa11.5□□□□□ -0.57
CCDC9-203ENST00000596938 PLCD3Q8N3E9 789 aa11.5□□□□□ -0.57
CCDC9-203ENST00000596938 LINC00301Q8NCQ3 95 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms