RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 METTL14Q9HCE5 456 aaKnown RBP6.65□□□□□ -1.34
SMAD4-203ENST00000585448 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.65□□□□□ -1.34
SMAD4-203ENST00000585448 SLC5A4Q9NY91 659 aa6.65□□□□□ -1.34
SMAD4-203ENST00000585448 MIS18AQ9NYP9 233 aa6.65□□□□□ -1.34
SMAD4-203ENST00000585448 MBD1Q9UIS9 605 aaPredicted RBP6.65□□□□□ -1.34
SMAD4-203ENST00000585448 FBXO9Q9UK97 447 aaPredicted RBP6.65□□□□□ -1.34
SMAD4-203ENST00000585448 NUDT5Q9UKK9 219 aa6.65□□□□□ -1.34
SMAD4-203ENST00000585448 PNMA2Q9UL42 364 aa6.65□□□□□ -1.34
SMAD4-203ENST00000585448 HPCAL4Q9UM19 191 aa6.65□□□□□ -1.34
SMAD4-203ENST00000585448 CARD8Q9Y2G2 431 aa6.65□□□□□ -1.34
SMAD4-203ENST00000585448 MRPS23Q9Y3D9 190 aaKnown RBP6.65□□□□□ -1.34
SMAD4-203ENST00000585448 C2CD2Q9Y426 696 aa6.65□□□□□ -1.34
SMAD4-203ENST00000585448 GRIN2DO15399 1336 aa6.65□□□□□ -1.35
SMAD4-203ENST00000585448 UBN2Q6ZU65 1347 aa6.65□□□□□ -1.35
SMAD4-203ENST00000585448 IRS2Q9Y4H2 1338 aa6.65□□□□□ -1.35
SMAD4-203ENST00000585448 TMEM247A6NEH6 219 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 AQP7O14520 342 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 APAF1O14727 1248 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 ARHGAP6O43182 974 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 KCNQ2O43526 872 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 MGEA5O60502 916 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 WDHD1O75717 1129 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-203ENST00000585448 S100A1P23297 94 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 HOXD12P35452 270 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 MLH1P40692 756 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 NEK4P51957 841 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 GPR85P60893 370 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 GABREP78334 506 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 APBA1Q02410 837 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 CCDC153Q494R4 210 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 GALNT17Q6IS24 598 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 USP53Q70EK8 1073 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 ZNF605Q86T29 641 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 ZNF554Q86TJ5 538 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 DCP2Q8IU60 420 aaKnown RBP6.64□□□□□ -1.35
SMAD4-203ENST00000585448 CCAR1Q8IX12 1150 aaKnown RBP6.64□□□□□ -1.35
SMAD4-203ENST00000585448 TTC39CQ8N584 583 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 VPS37AQ8NEZ2 397 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 PPP1R14CQ8TAE6 165 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 ATP6V0A1Q93050 837 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 EVI5LQ96CN4 794 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 LRRC45Q96CN5 670 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 PEX11GQ96HA9 241 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 TMEM169Q96HH4 297 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 CHAMP1Q96JM3 812 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 SNX27Q96L92 541 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 NR1H4Q96RI1 486 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-203ENST00000585448 CGREF1Q99674 301 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 SLC39A3Q9BRY0 314 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 CCDC28BQ9BUN5 200 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 PHF20Q9BVI0 1012 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 MIS12Q9H081 205 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 ZBTB40Q9NUA8 1239 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 MARCH2Q9P0N8 246 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 C6orf203Q9P0P8 240 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-203ENST00000585448 SEL1LQ9UBV2 794 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 CDC23Q9UJX2 597 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 FANCD2Q9BXW9 1451 aa6.64□□□□□ -1.35
SMAD4-203ENST00000585448 ST20-MTHFSA0A0A6YYL1 179 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 C22orf46C9J442 243 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 E7ENQ6 273 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 WNT9AO14904 365 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 FIBPO43427 364 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 CYTH3O43739 400 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 STX6O43752 255 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 STAM2O75886 525 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 BBOX1O75936 387 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 PCF11O94913 1555 aaKnown RBP6.63□□□□□ -1.35
SMAD4-203ENST00000585448 RAPGEF3O95398 923 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 BAG3O95817 575 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 NSD2O96028 1365 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 MYCLP1P12525 358 aaPredicted RBP6.63□□□□□ -1.35
SMAD4-203ENST00000585448 ALADP13716 330 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 LCP1P13796 627 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 RPL17P18621 184 aaKnown RBP6.63□□□□□ -1.35
SMAD4-203ENST00000585448 IBSPP21815 317 aaPredicted RBP6.63□□□□□ -1.35
SMAD4-203ENST00000585448 FBLN1P23142 703 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 TACR1P25103 407 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 BCL6P41182 706 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 PMS2P54278 862 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 GNG11P61952 73 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 TUBA1BP68363 451 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 TUBA4AP68366 448 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 KRT85P78386 507 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 PDE1BQ01064 536 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 NPATQ14207 1427 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 EIF4A2Q14240 407 aaKnown RBP6.63□□□□□ -1.35
SMAD4-203ENST00000585448 KIZQ2M2Z5 673 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 ACCSLQ4AC99 568 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 EMC4Q5J8M3 183 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 FAM209AQ5JX71 171 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 TTC22Q5TAA0 569 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 LBX2Q6XYB7 198 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 TUBA1AQ71U36 451 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 SSH2Q76I76 1423 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 UBE2Q1Q7Z7E8 422 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 ERICH1Q86X53 443 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 CCDC146Q8IYE0 955 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 IFNL3Q8IZI9 196 aa6.63□□□□□ -1.35
SMAD4-203ENST00000585448 SYT2Q8N9I0 419 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms