RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 THNSL1Q8IYQ7 743 aa16.94■□□□□ 0.3
RABGGTA-219ENST00000560871 BCL7CQ8WUZ0 217 aaPredicted RBP16.94■□□□□ 0.3
RABGGTA-219ENST00000560871 SNX27Q96L92 541 aa16.94■□□□□ 0.3
RABGGTA-219ENST00000560871 RPS6KC1Q96S38 1066 aa16.94■□□□□ 0.3
RABGGTA-219ENST00000560871 TMEM175Q9BSA9 504 aa16.94■□□□□ 0.3
RABGGTA-219ENST00000560871 TCHPQ9BT92 498 aa16.94■□□□□ 0.3
RABGGTA-219ENST00000560871 GBP3Q9H0R5 595 aa16.94■□□□□ 0.3
RABGGTA-219ENST00000560871 CLDND1Q9NY35 253 aa16.94■□□□□ 0.3
RABGGTA-219ENST00000560871 PCDHB13Q9Y5F0 798 aa16.94■□□□□ 0.3
RABGGTA-219ENST00000560871 VCANP13611 3396 aa16.94■□□□□ 0.3
RABGGTA-219ENST00000560871 CARNS1A5YM72 827 aa16.93■□□□□ 0.3
RABGGTA-219ENST00000560871 GOLGA6L4A6NEF3 574 aa16.93■□□□□ 0.3
RABGGTA-219ENST00000560871 GRXCR2A6NFK2 248 aa16.93■□□□□ 0.3
RABGGTA-219ENST00000560871 H3BQ06 376 aaPredicted RBP16.93■□□□□ 0.3
RABGGTA-219ENST00000560871 EIF3DO15371 548 aaKnown RBP eCLIP16.93■□□□□ 0.3
RABGGTA-219ENST00000560871 GADD45BO75293 160 aaPredicted RBP16.93■□□□□ 0.3
RABGGTA-219ENST00000560871 PRPF6O94906 941 aaKnown RBP16.93■□□□□ 0.3
RABGGTA-219ENST00000560871 GTF2F1P35269 517 aaKnown RBP eCLIP16.93■□□□□ 0.3
RABGGTA-219ENST00000560871 OSTNP61366 133 aa16.93■□□□□ 0.3
RABGGTA-219ENST00000560871 FAM160A1Q05DH4 1040 aa16.93■□□□□ 0.3
RABGGTA-219ENST00000560871 DPYDQ12882 1025 aa16.93■□□□□ 0.3
RABGGTA-219ENST00000560871 ADAM15Q13444 863 aa16.93■□□□□ 0.3
RABGGTA-219ENST00000560871 PUS10Q3MIT2 529 aaKnown RBP16.93■□□□□ 0.3
RABGGTA-219ENST00000560871 SEZ6Q53EL9 994 aa16.93■□□□□ 0.3
RABGGTA-219ENST00000560871 ALKAL1Q6UXT8 129 aa16.93■□□□□ 0.3
RABGGTA-219ENST00000560871 ADGRD2Q7Z7M1 963 aa16.93■□□□□ 0.3
RABGGTA-219ENST00000560871 ACCSQ96QU6 501 aa16.93■□□□□ 0.3
RABGGTA-219ENST00000560871 CCDC94Q9BW85 323 aaPredicted RBP16.93■□□□□ 0.3
RABGGTA-219ENST00000560871 MARCH5Q9NX47 278 aa16.93■□□□□ 0.3
RABGGTA-219ENST00000560871 TDRD15B5MCY1 1934 aaKnown RBP16.92■□□□□ 0.3
RABGGTA-219ENST00000560871 NT5C1B-RDH14C9J2C7 533 aa16.92■□□□□ 0.3
RABGGTA-219ENST00000560871 OGTO15294 1046 aa16.92■□□□□ 0.3
RABGGTA-219ENST00000560871 CSPG5O95196 566 aa16.92■□□□□ 0.3
RABGGTA-219ENST00000560871 IL9P15248 144 aa16.92■□□□□ 0.3
RABGGTA-219ENST00000560871 ADSSP30520 456 aa16.92■□□□□ 0.3
RABGGTA-219ENST00000560871 HOXD13P35453 343 aa16.92■□□□□ 0.3
RABGGTA-219ENST00000560871 TNFSF9P41273 254 aa16.92■□□□□ 0.3
RABGGTA-219ENST00000560871 ALDH7A1P49419 539 aaKnown RBP16.92■□□□□ 0.3
RABGGTA-219ENST00000560871 BMT2Q1RMZ1 405 aa16.92■□□□□ 0.3
RABGGTA-219ENST00000560871 KMT5BQ4FZB7 885 aa16.92■□□□□ 0.3
RABGGTA-219ENST00000560871 ZBTB41Q5SVQ8 909 aa16.92■□□□□ 0.3
RABGGTA-219ENST00000560871 PTCRAQ6ISU1 281 aaPredicted RBP16.92■□□□□ 0.3
RABGGTA-219ENST00000560871 KIAA0895Q8NCT3 520 aa16.92■□□□□ 0.3
RABGGTA-219ENST00000560871 IGSF21Q96ID5 467 aa16.92■□□□□ 0.3
RABGGTA-219ENST00000560871 ACAP3Q96P50 834 aa16.92■□□□□ 0.3
RABGGTA-219ENST00000560871 PPP1R10Q96QC0 940 aaKnown RBP16.92■□□□□ 0.3
RABGGTA-219ENST00000560871 MSTO1Q9BUK6 570 aa16.92■□□□□ 0.3
RABGGTA-219ENST00000560871 IGFLR1Q9H665 355 aa16.92■□□□□ 0.3
RABGGTA-219ENST00000560871 TOPORSQ9NS56 1045 aaPredicted RBP16.92■□□□□ 0.3
RABGGTA-219ENST00000560871 SPG21Q9NZD8 308 aa16.92■□□□□ 0.3
RABGGTA-219ENST00000560871 CNTN3Q9P232 1028 aa16.92■□□□□ 0.3
RABGGTA-219ENST00000560871 EXOC7Q9UPT5 735 aa16.92■□□□□ 0.3
RABGGTA-219ENST00000560871 LZTS1Q9Y250 596 aa16.92■□□□□ 0.3
RABGGTA-219ENST00000560871 UBE4BO95155 1302 aa16.92■□□□□ 0.3
RABGGTA-219ENST00000560871 NRP1O14786 923 aa16.91■□□□□ 0.3
RABGGTA-219ENST00000560871 FSCN2O14926 492 aa16.91■□□□□ 0.3
RABGGTA-219ENST00000560871 LINC01565O15544 149 aa16.91■□□□□ 0.3
RABGGTA-219ENST00000560871 NR1I2O75469 434 aa16.91■□□□□ 0.3
RABGGTA-219ENST00000560871 MATR3P43243 847 aaKnown RBP eCLIP16.91■□□□□ 0.3
RABGGTA-219ENST00000560871 YARSP54577 528 aaKnown RBP16.91■□□□□ 0.3
RABGGTA-219ENST00000560871 ERVFC1P60507 584 aa16.91■□□□□ 0.3
RABGGTA-219ENST00000560871 DLX2Q07687 328 aaPredicted RBP16.91■□□□□ 0.3
RABGGTA-219ENST00000560871 TUSC3Q13454 348 aa16.91■□□□□ 0.3
RABGGTA-219ENST00000560871 SLC10A6Q3KNW5 377 aa16.91■□□□□ 0.3
RABGGTA-219ENST00000560871 GLRA4Q5JXX5 417 aa16.91■□□□□ 0.3
RABGGTA-219ENST00000560871 CLEC17AQ6ZS10 378 aa16.91■□□□□ 0.3
RABGGTA-219ENST00000560871 EP400NLQ6ZTU2 488 aa16.91■□□□□ 0.3
RABGGTA-219ENST00000560871 STXBP4Q6ZWJ1 553 aa16.91■□□□□ 0.3
RABGGTA-219ENST00000560871 ZNF507Q8TCN5 953 aa16.91■□□□□ 0.3
RABGGTA-219ENST00000560871 SCFD1Q8WVM8 642 aa16.91■□□□□ 0.3
RABGGTA-219ENST00000560871 PPP2R3CQ969Q6 453 aa16.91■□□□□ 0.3
RABGGTA-219ENST00000560871 ZMAT2Q96NC0 199 aaKnown RBP16.91■□□□□ 0.3
RABGGTA-219ENST00000560871 FAM193BQ96PV7 902 aaPredicted RBP16.91■□□□□ 0.3
RABGGTA-219ENST00000560871 VN1R3Q9BXE9 311 aa16.91■□□□□ 0.3
RABGGTA-219ENST00000560871 TMEM206Q9H813 350 aa16.91■□□□□ 0.3
RABGGTA-219ENST00000560871 TLR9Q9NR96 1032 aa16.91■□□□□ 0.3
RABGGTA-219ENST00000560871 CPSF3Q9UKF6 684 aaKnown RBP16.91■□□□□ 0.3
RABGGTA-219ENST00000560871 EFEMP2O95967 443 aa16.9■□□□□ 0.3
RABGGTA-219ENST00000560871 RPN1P04843 607 aaKnown RBP16.9■□□□□ 0.3
RABGGTA-219ENST00000560871 THP07101 528 aa16.9■□□□□ 0.3
RABGGTA-219ENST00000560871 CLTAP09496 248 aa16.9■□□□□ 0.3
RABGGTA-219ENST00000560871 CXCL8P10145 99 aa16.9■□□□□ 0.3
RABGGTA-219ENST00000560871 KCNE1P15382 129 aa16.9■□□□□ 0.3
RABGGTA-219ENST00000560871 POSTNQ15063 836 aa16.9■□□□□ 0.3
RABGGTA-219ENST00000560871 KYAT1Q16773 422 aa16.9■□□□□ 0.3
RABGGTA-219ENST00000560871 SLFN12LQ6IEE8 588 aa16.9■□□□□ 0.3
RABGGTA-219ENST00000560871 PDE12Q6L8Q7 609 aaKnown RBP16.9■□□□□ 0.3
RABGGTA-219ENST00000560871 KANK3Q6NY19 840 aa16.9■□□□□ 0.3
RABGGTA-219ENST00000560871 RNF168Q8IYW5 571 aaPredicted RBP16.9■□□□□ 0.3
RABGGTA-219ENST00000560871 EFHBQ8N7U6 833 aa16.9■□□□□ 0.3
RABGGTA-219ENST00000560871 TMEM169Q96HH4 297 aa16.9■□□□□ 0.3
RABGGTA-219ENST00000560871 TIGD1Q96MW7 591 aa16.9■□□□□ 0.3
RABGGTA-219ENST00000560871 PAAF1Q9BRP4 392 aa16.9■□□□□ 0.3
RABGGTA-219ENST00000560871 SLC39A2Q9NP94 309 aa16.9■□□□□ 0.3
RABGGTA-219ENST00000560871 EXOC1Q9NV70 894 aa16.9■□□□□ 0.3
RABGGTA-219ENST00000560871 CACNG4Q9UBN1 327 aa16.9■□□□□ 0.3
RABGGTA-219ENST00000560871 PRG3Q9Y2Y8 225 aaPredicted RBP16.9■□□□□ 0.3
RABGGTA-219ENST00000560871 PCDHGC5Q9Y5F6 944 aa16.9■□□□□ 0.3
RABGGTA-219ENST00000560871 TTC28Q96AY4 2481 aa16.9■□□□□ 0.3
RABGGTA-219ENST00000560871 PDCD11Q14690 1871 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms