RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 ARID5AQ03989 594 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 PTK2Q05397 1052 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 GFPT1Q06210 699 aaPredicted RBP10.08□□□□□ -0.8
GNE-206ENST00000543356 C10orf76Q5T2E6 689 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 ZNF571Q7Z3V5 609 aaPredicted RBP10.08□□□□□ -0.8
GNE-206ENST00000543356 ZBTB33Q86T24 672 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 WDR49Q8IV35 697 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 NLRP7Q8WX94 980 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 NT5C1BQ96P26 610 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 WDR24Q96S15 920 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 TCHPQ9BT92 498 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 PDE11AQ9HCR9 933 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 UBE2TQ9NPD8 197 aaPredicted RBP10.08□□□□□ -0.8
GNE-206ENST00000543356 NENFQ9UMX5 172 aa10.08□□□□□ -0.8
GNE-206ENST00000543356 ANK1P16157 1881 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 PTPRJQ12913 1337 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 RCCD1A6NED2 376 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 SEPT4O43236 478 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 MCF2P10911 925 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 HARSP12081 509 aaKnown RBP10.07□□□□□ -0.8
GNE-206ENST00000543356 TNNI1P19237 187 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 CASQ1P31415 396 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 GTF2F1P35269 517 aaKnown RBP eCLIP10.07□□□□□ -0.8
GNE-206ENST00000543356 MFAP3P55082 362 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 KIF5AQ12840 1032 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 PCBP1Q15365 356 aaKnown RBP eCLIP10.07□□□□□ -0.8
GNE-206ENST00000543356 KYAT1Q16773 422 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 CCDC122Q5T0U0 273 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 TDRD10Q5VZ19 366 aaKnown RBP10.07□□□□□ -0.8
GNE-206ENST00000543356 ENOSF1Q7L5Y1 443 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 VPS36Q86VN1 386 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 GPIHBP1Q8IV16 184 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 ZNF668Q96K58 619 aaPredicted RBP10.07□□□□□ -0.8
GNE-206ENST00000543356 CDT1Q9H211 546 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 ADAMTS10Q9H324 1103 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 YY1AP1Q9H869 796 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 GEMIN8Q9NWZ8 242 aaKnown RBP10.07□□□□□ -0.8
GNE-206ENST00000543356 KAT6AQ92794 2004 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 RIOK3O14730 519 aaKnown RBP10.07□□□□□ -0.8
GNE-206ENST00000543356 ABL1P00519 1130 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 CYP2C9P11712 490 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 MAP2K2P36507 400 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 TNFSF9P41273 254 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 MAGEA1P43355 309 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 BMS1Q14692 1282 aaKnown RBP10.07□□□□□ -0.8
GNE-206ENST00000543356 ARHGAP44Q17R89 818 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 EEF1DP3Q658K8 133 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 HELQQ8TDG4 1101 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 SYT11Q9BT88 431 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 LACRTQ9GZZ8 138 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 PDZD7Q9H5P4 517 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 L2HGDHQ9H9P8 463 aa10.07□□□□□ -0.8
GNE-206ENST00000543356 A0A087X0T9 212 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 C17orf102A2RUQ5 167 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 TSPAN1O60635 241 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 LRRN2O75325 713 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 GPR32O75388 356 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 IL18RAPO95256 599 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 FAM228BP0C875 321 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 PNMA6AP0CW24 399 aaPredicted RBP10.06□□□□□ -0.8
GNE-206ENST00000543356 GNAT1P11488 350 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 PIK3CAP42336 1068 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 CAP1Q01518 475 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 GCNT1Q02742 428 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 CACNB2Q08289 660 aaPredicted RBP10.06□□□□□ -0.8
GNE-206ENST00000543356 ZNF569Q5MCW4 686 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 OLIG1Q8TAK6 271 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 SHC3Q92529 594 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 KREMEN1Q96MU8 473 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 MTG1Q9BT17 334 aaPredicted RBP10.06□□□□□ -0.8
GNE-206ENST00000543356 IRX2Q9BZI1 471 aaPredicted RBP10.06□□□□□ -0.8
GNE-206ENST00000543356 SPC25Q9HBM1 224 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 RNF186Q9NXI6 227 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 TRIM10Q9UDY6 481 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 RALGAPA2Q2PPJ7 1873 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 MYADML2A6NDP7 307 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 FOXN3O00409 490 aaPredicted RBP10.06□□□□□ -0.8
GNE-206ENST00000543356 CLSTN1O94985 981 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 VNN1O95497 513 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 HLA-DRAP01903 254 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 C6orf222P0C671 652 aaPredicted RBP10.06□□□□□ -0.8
GNE-206ENST00000543356 RARBP10826 455 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 ARF4P18085 180 aaPredicted RBP10.06□□□□□ -0.8
GNE-206ENST00000543356 HOXD10P28358 340 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 HIC1Q14526 733 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 SEZ6Q53EL9 994 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 SMYD5Q6GMV2 418 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 RUFY4Q6ZNE9 571 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 FAM71AQ8IYT1 594 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 SLC35F6Q8N357 371 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 PPM1KQ8N3J5 372 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 PDCL2Q8N4E4 241 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 SCLT1Q96NL6 688 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 PPP1R16BQ96T49 567 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.06□□□□□ -0.8
GNE-206ENST00000543356 GCOM2Q9BZD3 368 aaPredicted RBP10.06□□□□□ -0.8
GNE-206ENST00000543356 C1orf112Q9NSG2 853 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 SRRDQ9UH36 339 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 ADAMTS1Q9UHI8 967 aa10.06□□□□□ -0.8
GNE-206ENST00000543356 GUCA1BQ9UMX6 200 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms