RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 USP14P54578 494 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 BACE1P56817 501 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 RAB15P59190 212 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 TRIM32Q13049 653 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 SPP2Q13103 211 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 MKRN4PQ13434 485 aaPredicted RBP8.06□□□□□ -1.12
HDAC3-216ENST00000523088 MTMR3Q13615 1198 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 MRPL58Q14197 206 aaKnown RBP8.06□□□□□ -1.12
HDAC3-216ENST00000523088 GNA13Q14344 377 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 RAB3GAP1Q15042 981 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 WHAMMP3Q1A5X7 153 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 ZNF792Q3KQV3 632 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 ANKDD1AQ495B1 522 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 CFAP221Q4G0U5 840 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 SETMARQ53H47 684 aaPredicted RBP8.06□□□□□ -1.12
HDAC3-216ENST00000523088 INTS11Q5TA45 600 aaKnown RBP8.06□□□□□ -1.12
HDAC3-216ENST00000523088 CYP4A22Q5TCH4 519 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 BNIPLQ7Z465 357 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 ZER1Q7Z7L7 766 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 MAPKAPK5Q8IW41 473 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 CCDC155Q8N6L0 562 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 ENAHQ8N8S7 591 aaPredicted RBP8.06□□□□□ -1.12
HDAC3-216ENST00000523088 SHCBP1Q8NEM2 672 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.06□□□□□ -1.12
HDAC3-216ENST00000523088 PXYLP1Q8TE99 480 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 DHX58Q96C10 678 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 CNDP1Q96KN2 507 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 ART5Q96L15 291 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 PURBQ96QR8 312 aaKnown RBP8.06□□□□□ -1.12
HDAC3-216ENST00000523088 TSG101Q99816 390 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 EDEM3Q9BZQ6 932 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 GLT8D2Q9H1C3 349 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 MROH8Q9H579 483 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 TBC1D22BQ9NU19 505 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 KIF17Q9P2E2 1029 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 EXOC7Q9UPT5 735 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 FADS3Q9Y5Q0 445 aa8.06□□□□□ -1.12
HDAC3-216ENST00000523088 MKI67P46013 3256 aaKnown RBP8.05□□□□□ -1.12
HDAC3-216ENST00000523088 MAGEB6P1A0A0J9YX57 407 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 LOC105371267A0A1B0GV96 52 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 ARHGAP10A1A4S6 786 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 ANO9A1A5B4 782 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 GOLGA8CPA6NN73 597 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 POM121CA8CG34 1229 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 USP17L10C9JJH3 530 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 AP3B1O00203 1094 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 WNT7AO00755 349 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 PLOD3O60568 738 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 CDC45O75419 566 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 PALMO75781 387 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 CSPG5O95196 566 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 OR5F1O95221 314 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 CYP2C8P10632 490 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 GNAT1P11488 350 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 STMN1P16949 149 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 PTPN2P17706 415 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 HOXA7P31268 230 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-216ENST00000523088 ABCG1P45844 678 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 CBX5P45973 191 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 MAN2A2P49641 1150 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 ZBTB16Q05516 673 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 CBLBQ13191 982 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 TBX2Q13207 712 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-216ENST00000523088 PRKG2Q13237 762 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 DRP2Q13474 957 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 E2F2Q14209 437 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 PSMD6Q15008 389 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 NONOQ15233 471 aaKnown RBP eCLIP8.05□□□□□ -1.12
HDAC3-216ENST00000523088 CCDC40Q4G0X9 1142 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 VWA3BQ502W6 1294 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 SLC44A4Q53GD3 710 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 TMTC4Q5T4D3 741 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 SLC9C2Q5TAH2 1124 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 GKAP1Q5VSY0 366 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-216ENST00000523088 FBXW10Q5XX13 1052 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 FBXO38Q6PIJ6 1188 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 SLC2A7Q6PXP3 512 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 CWC27Q6UX04 472 aaKnown RBP8.05□□□□□ -1.12
HDAC3-216ENST00000523088 RANBP10Q6VN20 620 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 ZNF554Q86TJ5 538 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 TRMT44Q8IYL2 757 aaKnown RBP8.05□□□□□ -1.12
HDAC3-216ENST00000523088 FBXO30Q8TB52 745 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 MAIP1Q8WWC4 291 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 ATL1Q8WXF7 558 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 JPH3Q8WXH2 748 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-216ENST00000523088 SOCS4Q8WXH5 440 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 MAELQ96JY0 434 aaKnown RBP8.05□□□□□ -1.12
HDAC3-216ENST00000523088 TNIP3Q96KP6 325 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 DESI2Q9BSY9 194 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 VPS11Q9H270 941 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 SCPEP1Q9HB40 452 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 VCX3AQ9NNX9 186 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 PRM3Q9NNZ6 103 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 CABP5Q9NP86 173 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 DMAP1Q9NPF5 467 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-216ENST00000523088 PIH1D3Q9NQM4 214 aaKnown RBP8.05□□□□□ -1.12
HDAC3-216ENST00000523088 TLR7Q9NYK1 1049 aaKnown RBP8.05□□□□□ -1.12
HDAC3-216ENST00000523088 ZNF624Q9P2J8 865 aaPredicted RBP8.05□□□□□ -1.12
HDAC3-216ENST00000523088 TEKT2Q9UIF3 430 aa8.05□□□□□ -1.12
HDAC3-216ENST00000523088 ZBTB21Q9ULJ3 1066 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms