RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 ZBTB45Q96K62 511 aaPredicted RBP25.26■■□□□ 1.63
CLDND1-230ENST00000514537 B3GALT6Q96L58 329 aa25.26■■□□□ 1.63
CLDND1-230ENST00000514537 MUTYHQ9UIF7 546 aa25.26■■□□□ 1.63
CLDND1-230ENST00000514537 MORC2Q9Y6X9 1032 aaPredicted RBP25.26■■□□□ 1.63
CLDND1-230ENST00000514537 SMIM28A0A1B0GU29 152 aa25.25■■□□□ 1.63
CLDND1-230ENST00000514537 FAM86C2PA6NEL3 165 aa25.25■■□□□ 1.63
CLDND1-230ENST00000514537 H0YCG3 227 aa25.25■■□□□ 1.63
CLDND1-230ENST00000514537 TOM1L1O75674 476 aa25.25■■□□□ 1.63
CLDND1-230ENST00000514537 KIF4AO95239 1232 aa25.25■■□□□ 1.63
CLDND1-230ENST00000514537 ZNF131P52739 623 aa25.25■■□□□ 1.63
CLDND1-230ENST00000514537 YARSP54577 528 aaKnown RBP25.25■■□□□ 1.63
CLDND1-230ENST00000514537 OSTNP61366 133 aa25.25■■□□□ 1.63
CLDND1-230ENST00000514537 CEBPZQ03701 1054 aaKnown RBP25.25■■□□□ 1.63
CLDND1-230ENST00000514537 GLRA4Q5JXX5 417 aa25.25■■□□□ 1.63
CLDND1-230ENST00000514537 ATAT1Q5SQI0 421 aa25.25■■□□□ 1.63
CLDND1-230ENST00000514537 LARP4BQ92615 738 aaKnown RBP25.25■■□□□ 1.63
CLDND1-230ENST00000514537 RIPOR3Q96MK2 946 aa25.25■■□□□ 1.63
CLDND1-230ENST00000514537 USP28Q96RU2 1077 aa25.25■■□□□ 1.63
CLDND1-230ENST00000514537 SFXN1Q9H9B4 322 aa25.25■■□□□ 1.63
CLDND1-230ENST00000514537 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.25■■□□□ 1.63
CLDND1-230ENST00000514537 TOPORSQ9NS56 1045 aaPredicted RBP25.25■■□□□ 1.63
CLDND1-230ENST00000514537 SF3B1O75533 1304 aaKnown RBP eCLIP25.25■■□□□ 1.63
CLDND1-230ENST00000514537 WEE2P0C1S8 567 aa25.24■■□□□ 1.63
CLDND1-230ENST00000514537 ZPBP2Q6X784 338 aa25.24■■□□□ 1.63
CLDND1-230ENST00000514537 HAUS6Q7Z4H7 955 aa25.24■■□□□ 1.63
CLDND1-230ENST00000514537 HASPINQ8TF76 798 aa25.24■■□□□ 1.63
CLDND1-230ENST00000514537 RIN2Q8WYP3 895 aaPredicted RBP25.24■■□□□ 1.63
CLDND1-230ENST00000514537 CLIC6Q96NY7 704 aa25.24■■□□□ 1.63
CLDND1-230ENST00000514537 ACAP3Q96P50 834 aa25.24■■□□□ 1.63
CLDND1-230ENST00000514537 POMKQ9H5K3 350 aa25.24■■□□□ 1.63
CLDND1-230ENST00000514537 PARVGQ9HBI0 331 aa25.24■■□□□ 1.63
CLDND1-230ENST00000514537 FNIP2Q9P278 1114 aa25.24■■□□□ 1.63
CLDND1-230ENST00000514537 C1RP00736 705 aa25.23■■□□□ 1.63
CLDND1-230ENST00000514537 SLC39A14Q15043 492 aa25.23■■□□□ 1.63
CLDND1-230ENST00000514537 RTP2Q5QGT7 225 aa25.23■■□□□ 1.63
CLDND1-230ENST00000514537 TMC5Q6UXY8 1006 aa25.23■■□□□ 1.63
CLDND1-230ENST00000514537 MYCT1Q8N699 235 aa25.23■■□□□ 1.63
CLDND1-230ENST00000514537 FEZF2Q8TBJ5 459 aa25.23■■□□□ 1.63
CLDND1-230ENST00000514537 TRIOO75962 3097 aa25.23■■□□□ 1.63
CLDND1-230ENST00000514537 TMEM189-UBE2V1I3L0A0 370 aa25.22■■□□□ 1.63
CLDND1-230ENST00000514537 FAM13AO94988 1023 aa25.22■■□□□ 1.63
CLDND1-230ENST00000514537 GLUD1P00367 558 aa25.22■■□□□ 1.63
CLDND1-230ENST00000514537 SCP2P22307 547 aa25.22■■□□□ 1.63
CLDND1-230ENST00000514537 CREMQ03060 361 aa25.22■■□□□ 1.63
CLDND1-230ENST00000514537 ELAVL2Q12926 359 aaKnown RBP25.22■■□□□ 1.63
CLDND1-230ENST00000514537 FAM171A1Q5VUB5 890 aa25.22■■□□□ 1.63
CLDND1-230ENST00000514537 DCLRE1AQ6PJP8 1040 aa25.22■■□□□ 1.63
CLDND1-230ENST00000514537 GPR149Q86SP6 731 aa25.22■■□□□ 1.63
CLDND1-230ENST00000514537 SNX27Q96L92 541 aa25.22■■□□□ 1.63
CLDND1-230ENST00000514537 UROC1Q96N76 676 aa25.22■■□□□ 1.63
CLDND1-230ENST00000514537 TTPALQ9BTX7 342 aa25.22■■□□□ 1.63
CLDND1-230ENST00000514537 CCDC39Q9UFE4 941 aa25.22■■□□□ 1.63
CLDND1-230ENST00000514537 NR2E1Q9Y466 385 aa25.22■■□□□ 1.63
CLDND1-230ENST00000514537 PRR33A8MZF0 331 aa25.21■■□□□ 1.63
CLDND1-230ENST00000514537 CLDN3O15551 220 aa25.21■■□□□ 1.63
CLDND1-230ENST00000514537 MEFVO15553 781 aaPredicted RBP25.21■■□□□ 1.63
CLDND1-230ENST00000514537 TRAK2O60296 914 aa25.21■■□□□ 1.63
CLDND1-230ENST00000514537 KRT18P05783 430 aaKnown RBP25.21■■□□□ 1.63
CLDND1-230ENST00000514537 KCNE1P15382 129 aa25.21■■□□□ 1.63
CLDND1-230ENST00000514537 IGFBP6P24592 240 aaPredicted RBP25.21■■□□□ 1.63
CLDND1-230ENST00000514537 CLCNKBP51801 687 aa25.21■■□□□ 1.63
CLDND1-230ENST00000514537 MCL1Q07820 350 aa25.21■■□□□ 1.63
CLDND1-230ENST00000514537 NOLC1Q14978 699 aaKnown RBP eCLIP25.21■■□□□ 1.63
CLDND1-230ENST00000514537 UPP1Q16831 310 aa25.21■■□□□ 1.63
CLDND1-230ENST00000514537 CD300LGQ6UXG3 332 aa25.21■■□□□ 1.63
CLDND1-230ENST00000514537 HSCBQ8IWL3 235 aa25.21■■□□□ 1.63
CLDND1-230ENST00000514537 CMASQ8NFW8 434 aaPredicted RBP25.21■■□□□ 1.63
CLDND1-230ENST00000514537 ZMAT2Q96NC0 199 aaKnown RBP25.21■■□□□ 1.63
CLDND1-230ENST00000514537 FIZ1Q96SL8 496 aa25.21■■□□□ 1.63
CLDND1-230ENST00000514537 MAN1C1Q9NR34 630 aa25.21■■□□□ 1.63
CLDND1-230ENST00000514537 CNTN3Q9P232 1028 aa25.21■■□□□ 1.63
CLDND1-230ENST00000514537 ANKFY1Q9P2R3 1169 aa25.21■■□□□ 1.63
CLDND1-230ENST00000514537 STK17AQ9UEE5 414 aa25.21■■□□□ 1.63
CLDND1-230ENST00000514537 DPP7Q9UHL4 492 aa25.21■■□□□ 1.63
CLDND1-230ENST00000514537 TBX20Q9UMR3 447 aa25.21■■□□□ 1.63
CLDND1-230ENST00000514537 SPDYE4A6NLX3 237 aa25.2■■□□□ 1.62
CLDND1-230ENST00000514537 B3GAT3O94766 335 aa25.2■■□□□ 1.62
CLDND1-230ENST00000514537 HARSP12081 509 aaKnown RBP25.2■■□□□ 1.62
CLDND1-230ENST00000514537 NASPP49321 788 aaPredicted RBP25.2■■□□□ 1.62
CLDND1-230ENST00000514537 SOX4Q06945 474 aaPredicted RBP25.2■■□□□ 1.62
CLDND1-230ENST00000514537 PRSS55Q6UWB4 352 aaPredicted RBP25.2■■□□□ 1.62
CLDND1-230ENST00000514537 C15orf39Q6ZRI6 1047 aa25.2■■□□□ 1.62
CLDND1-230ENST00000514537 PALB2Q86YC2 1186 aa25.2■■□□□ 1.62
CLDND1-230ENST00000514537 KRI1Q8N9T8 703 aaKnown RBP25.2■■□□□ 1.62
CLDND1-230ENST00000514537 LNX1Q8TBB1 728 aaPredicted RBP25.2■■□□□ 1.62
CLDND1-230ENST00000514537 HDAC7Q8WUI4 952 aa25.2■■□□□ 1.62
CLDND1-230ENST00000514537 PIK3R5Q8WYR1 880 aa25.2■■□□□ 1.62
CLDND1-230ENST00000514537 EDAQ92838 391 aa25.2■■□□□ 1.62
CLDND1-230ENST00000514537 HAPLN2Q9GZV7 340 aa25.2■■□□□ 1.62
CLDND1-230ENST00000514537 GOLGA2P5Q9HBQ8 144 aa25.2■■□□□ 1.62
CLDND1-230ENST00000514537 SLC38A7Q9NVC3 462 aa25.2■■□□□ 1.62
CLDND1-230ENST00000514537 K7ENM7 598 aa25.19■■□□□ 1.62
CLDND1-230ENST00000514537 TGM5O43548 720 aa25.19■■□□□ 1.62
CLDND1-230ENST00000514537 TBCAO75347 108 aaKnown RBP25.19■■□□□ 1.62
CLDND1-230ENST00000514537 PIGRP01833 764 aa25.19■■□□□ 1.62
CLDND1-230ENST00000514537 RPL17P18621 184 aaKnown RBP25.19■■□□□ 1.62
CLDND1-230ENST00000514537 SP100P23497 879 aaPredicted RBP25.19■■□□□ 1.62
CLDND1-230ENST00000514537 TXLNAP40222 546 aa25.19■■□□□ 1.62
CLDND1-230ENST00000514537 SLC10A6Q3KNW5 377 aa25.19■■□□□ 1.62
CLDND1-230ENST00000514537 RRAGBQ5VZM2 374 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms