RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 SPPL3Q8TCT6 385 aa12.08□□□□□ -0.48
CPSF7-212ENST00000489728 POMGNT1Q8WZA1 660 aa12.08□□□□□ -0.48
CPSF7-212ENST00000489728 PPP2R3CQ969Q6 453 aa12.08□□□□□ -0.48
CPSF7-212ENST00000489728 IGSF21Q96ID5 467 aa12.08□□□□□ -0.48
CPSF7-212ENST00000489728 ZBTB45Q96K62 511 aaPredicted RBP12.08□□□□□ -0.48
CPSF7-212ENST00000489728 GSDMAQ96QA5 445 aa12.08□□□□□ -0.48
CPSF7-212ENST00000489728 PPP1R10Q96QC0 940 aaKnown RBP12.08□□□□□ -0.48
CPSF7-212ENST00000489728 FGFBP2Q9BYJ0 223 aa12.08□□□□□ -0.48
CPSF7-212ENST00000489728 HAPLN2Q9GZV7 340 aa12.08□□□□□ -0.48
CPSF7-212ENST00000489728 GBP3Q9H0R5 595 aa12.08□□□□□ -0.48
CPSF7-212ENST00000489728 KIAA1586Q9HCI6 787 aa12.08□□□□□ -0.48
CPSF7-212ENST00000489728 KLK14Q9P0G3 267 aa12.08□□□□□ -0.48
CPSF7-212ENST00000489728 HCSTQ9UBK5 93 aa12.08□□□□□ -0.48
CPSF7-212ENST00000489728 CPSF3Q9UKF6 684 aaKnown RBP12.08□□□□□ -0.48
CPSF7-212ENST00000489728 AGO2Q9UKV8 859 aaKnown RBP12.08□□□□□ -0.48
CPSF7-212ENST00000489728 FAN1Q9Y2M0 1017 aa12.08□□□□□ -0.48
CPSF7-212ENST00000489728 DERAQ9Y315 318 aa12.08□□□□□ -0.48
CPSF7-212ENST00000489728 PDCD11Q14690 1871 aaKnown RBP12.08□□□□□ -0.48
CPSF7-212ENST00000489728 PLXNA4Q9HCM2 1894 aa12.08□□□□□ -0.48
CPSF7-212ENST00000489728 SMIM28A0A1B0GU29 152 aa12.07□□□□□ -0.48
CPSF7-212ENST00000489728 TTC26A0AVF1 554 aa12.07□□□□□ -0.48
CPSF7-212ENST00000489728 ANKRD63C9JTQ0 380 aa12.07□□□□□ -0.48
CPSF7-212ENST00000489728 TMEM189-UBE2V1I3L0A0 370 aa12.07□□□□□ -0.48
CPSF7-212ENST00000489728 RFXAPO00287 272 aa12.07□□□□□ -0.48
CPSF7-212ENST00000489728 NRP1O14786 923 aa12.07□□□□□ -0.48
CPSF7-212ENST00000489728 GRM6O15303 877 aa12.07□□□□□ -0.48
CPSF7-212ENST00000489728 XPOTO43592 962 aaKnown RBP12.07□□□□□ -0.48
CPSF7-212ENST00000489728 SMC2O95347 1197 aa12.07□□□□□ -0.48
CPSF7-212ENST00000489728 HARSP12081 509 aaKnown RBP12.07□□□□□ -0.48
CPSF7-212ENST00000489728 IGFBP4P22692 258 aa12.07□□□□□ -0.48
CPSF7-212ENST00000489728 CASP1P29466 404 aa12.07□□□□□ -0.48
CPSF7-212ENST00000489728 ADSSP30520 456 aa12.07□□□□□ -0.48
CPSF7-212ENST00000489728 PPP2R3AQ06190 1150 aa12.07□□□□□ -0.48
CPSF7-212ENST00000489728 KCNA1Q09470 495 aa12.07□□□□□ -0.48
CPSF7-212ENST00000489728 BMS1Q14692 1282 aaKnown RBP12.07□□□□□ -0.48
CPSF7-212ENST00000489728 KNOP1Q1ED39 458 aaKnown RBP12.07□□□□□ -0.48
CPSF7-212ENST00000489728 HS2ST1Q7LGA3 356 aa12.07□□□□□ -0.48
CPSF7-212ENST00000489728 DDX53Q86TM3 631 aaKnown RBP12.07□□□□□ -0.48
CPSF7-212ENST00000489728 C12orf56Q8IXR9 622 aa12.07□□□□□ -0.48
CPSF7-212ENST00000489728 GPR65Q8IYL9 337 aa12.07□□□□□ -0.48
CPSF7-212ENST00000489728 MAFAQ8NHW3 353 aaPredicted RBP12.07□□□□□ -0.48
CPSF7-212ENST00000489728 SCFD1Q8WVM8 642 aa12.07□□□□□ -0.48
CPSF7-212ENST00000489728 POF1BQ8WVV4 589 aa12.07□□□□□ -0.48
CPSF7-212ENST00000489728 DDX27Q96GQ7 796 aaKnown RBP12.07□□□□□ -0.48
CPSF7-212ENST00000489728 COLEC11Q9BWP8 271 aa12.07□□□□□ -0.48
CPSF7-212ENST00000489728 NSUN3Q9H649 340 aaKnown RBP12.07□□□□□ -0.48
CPSF7-212ENST00000489728 ASB7Q9H672 318 aa12.07□□□□□ -0.48
CPSF7-212ENST00000489728 RPF1Q9H9Y2 349 aaKnown RBP12.07□□□□□ -0.48
CPSF7-212ENST00000489728 TLR9Q9NR96 1032 aa12.07□□□□□ -0.48
CPSF7-212ENST00000489728 MIOSQ9NXC5 875 aa12.07□□□□□ -0.48
CPSF7-212ENST00000489728 DNAJB4Q9UDY4 337 aa12.07□□□□□ -0.48
CPSF7-212ENST00000489728 MYO9BQ13459 2157 aa12.06□□□□□ -0.48
CPSF7-212ENST00000489728 FSCN2O14926 492 aa12.06□□□□□ -0.48
CPSF7-212ENST00000489728 NCK2O43639 380 aa12.06□□□□□ -0.48
CPSF7-212ENST00000489728 EXTL3O43909 919 aa12.06□□□□□ -0.48
CPSF7-212ENST00000489728 B4GALT3O60512 393 aa12.06□□□□□ -0.48
CPSF7-212ENST00000489728 PRPF6O94906 941 aaKnown RBP12.06□□□□□ -0.48
CPSF7-212ENST00000489728 IL18RAPO95256 599 aa12.06□□□□□ -0.48
CPSF7-212ENST00000489728 PRR29P0C7W0 189 aa12.06□□□□□ -0.48
CPSF7-212ENST00000489728 CXCL8P10145 99 aa12.06□□□□□ -0.48
CPSF7-212ENST00000489728 CYP3A5P20815 502 aa12.06□□□□□ -0.48
CPSF7-212ENST00000489728 PAX3P23760 479 aa12.06□□□□□ -0.48
CPSF7-212ENST00000489728 HOXD13P35453 343 aa12.06□□□□□ -0.48
CPSF7-212ENST00000489728 OR1G1P47890 313 aa12.06□□□□□ -0.48
CPSF7-212ENST00000489728 OSTNP61366 133 aa12.06□□□□□ -0.48
CPSF7-212ENST00000489728 ENOX2Q16206 610 aaKnown RBP12.06□□□□□ -0.48
CPSF7-212ENST00000489728 SLC10A6Q3KNW5 377 aa12.06□□□□□ -0.48
CPSF7-212ENST00000489728 COBLL1Q53SF7 1204 aa12.06□□□□□ -0.48
CPSF7-212ENST00000489728 ARMCX5Q6P1M9 558 aa12.06□□□□□ -0.48
CPSF7-212ENST00000489728 NT5DC4Q86YG4 428 aa12.06□□□□□ -0.48
CPSF7-212ENST00000489728 KIAA0895Q8NCT3 520 aa12.06□□□□□ -0.48
CPSF7-212ENST00000489728 GLIS3Q8NEA6 775 aa12.06□□□□□ -0.48
CPSF7-212ENST00000489728 HPS3Q969F9 1004 aa12.06□□□□□ -0.48
CPSF7-212ENST00000489728 ALG13Q9NP73 1137 aaKnown RBP12.06□□□□□ -0.48
CPSF7-212ENST00000489728 SLC39A2Q9NP94 309 aa12.06□□□□□ -0.48
CPSF7-212ENST00000489728 NGRNQ9NPE2 291 aaKnown RBP12.06□□□□□ -0.48
CPSF7-212ENST00000489728 IRAK3Q9Y616 596 aa12.06□□□□□ -0.48
CPSF7-212ENST00000489728 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.05□□□□□ -0.48
CPSF7-212ENST00000489728 GOLGA6L22H0YM25 854 aa12.05□□□□□ -0.48
CPSF7-212ENST00000489728 PDXKO00764 312 aa12.05□□□□□ -0.48
CPSF7-212ENST00000489728 GADD45BO75293 160 aaPredicted RBP12.05□□□□□ -0.48
CPSF7-212ENST00000489728 EFEMP2O95967 443 aa12.05□□□□□ -0.48
CPSF7-212ENST00000489728 RPL9P32969 192 aaKnown RBP12.05□□□□□ -0.48
CPSF7-212ENST00000489728 PBX3P40426 434 aa12.05□□□□□ -0.48
CPSF7-212ENST00000489728 PPP1R2P41236 205 aa12.05□□□□□ -0.48
CPSF7-212ENST00000489728 ELAVL2Q12926 359 aaKnown RBP12.05□□□□□ -0.48
CPSF7-212ENST00000489728 STK4Q13043 487 aa12.05□□□□□ -0.48
CPSF7-212ENST00000489728 CAMK1Q14012 370 aa12.05□□□□□ -0.48
CPSF7-212ENST00000489728 MYBPC2Q14324 1141 aa12.05□□□□□ -0.48
CPSF7-212ENST00000489728 ZBTB6Q15916 424 aa12.05□□□□□ -0.48
CPSF7-212ENST00000489728 RNF168Q8IYW5 571 aaPredicted RBP12.05□□□□□ -0.48
CPSF7-212ENST00000489728 GPD1LQ8N335 351 aa12.05□□□□□ -0.48
CPSF7-212ENST00000489728 GUF1Q8N442 669 aaKnown RBP12.05□□□□□ -0.48
CPSF7-212ENST00000489728 SMARCE1Q969G3 411 aa12.05□□□□□ -0.48
CPSF7-212ENST00000489728 CDCA3Q99618 268 aaPredicted RBP12.05□□□□□ -0.48
CPSF7-212ENST00000489728 AGPAT3Q9NRZ7 376 aa12.05□□□□□ -0.48
CPSF7-212ENST00000489728 MARCH5Q9NX47 278 aa12.05□□□□□ -0.48
CPSF7-212ENST00000489728 ADAM28Q9UKQ2 775 aa12.05□□□□□ -0.48
CPSF7-212ENST00000489728 UBQLN1Q9UMX0 589 aaKnown RBP12.05□□□□□ -0.48
CPSF7-212ENST00000489728 SSX2IPQ9Y2D8 614 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms