RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 ANKRD54Q6NXT1 300 aa26.28■■□□□ 1.8
CPNE1-223ENST00000475146 TMEM184AQ6ZMB5 413 aa26.28■■□□□ 1.8
CPNE1-223ENST00000475146 TAS1R1Q7RTX1 841 aa26.28■■□□□ 1.8
CPNE1-223ENST00000475146 HASPINQ8TF76 798 aa26.28■■□□□ 1.8
CPNE1-223ENST00000475146 KCNN1Q92952 543 aa26.28■■□□□ 1.8
CPNE1-223ENST00000475146 ABCD1P33897 745 aa26.27■■□□□ 1.8
CPNE1-223ENST00000475146 MCL1Q07820 350 aa26.27■■□□□ 1.8
CPNE1-223ENST00000475146 BECN1Q14457 450 aa26.27■■□□□ 1.8
CPNE1-223ENST00000475146 NAB2Q15742 525 aa26.27■■□□□ 1.8
CPNE1-223ENST00000475146 SMAD2Q15796 467 aaKnown RBP26.27■■□□□ 1.8
CPNE1-223ENST00000475146 SEZ6Q53EL9 994 aa26.27■■□□□ 1.8
CPNE1-223ENST00000475146 SHC4Q6S5L8 630 aa26.27■■□□□ 1.8
CPNE1-223ENST00000475146 RNF168Q8IYW5 571 aaPredicted RBP26.27■■□□□ 1.8
CPNE1-223ENST00000475146 SNX27Q96L92 541 aa26.27■■□□□ 1.8
CPNE1-223ENST00000475146 PPP1R10Q96QC0 940 aaKnown RBP26.27■■□□□ 1.8
CPNE1-223ENST00000475146 FIZ1Q96SL8 496 aa26.27■■□□□ 1.8
CPNE1-223ENST00000475146 SSX2IPQ9Y2D8 614 aa26.27■■□□□ 1.8
CPNE1-223ENST00000475146 SPTBN5Q9NRC6 3674 aaKnown RBP26.27■■□□□ 1.8
CPNE1-223ENST00000475146 SF3B1O75533 1304 aaKnown RBP eCLIP26.26■■□□□ 1.79
CPNE1-223ENST00000475146 KIF4AO95239 1232 aa26.26■■□□□ 1.79
CPNE1-223ENST00000475146 IDEP14735 1019 aa26.26■■□□□ 1.79
CPNE1-223ENST00000475146 SSTR3P32745 418 aaPredicted RBP26.26■■□□□ 1.79
CPNE1-223ENST00000475146 DHX58Q96C10 678 aa26.26■■□□□ 1.79
CPNE1-223ENST00000475146 DNAJC19Q96DA6 116 aa26.26■■□□□ 1.79
CPNE1-223ENST00000475146 KLHL5Q96PQ7 755 aa26.26■■□□□ 1.79
CPNE1-223ENST00000475146 APOL5Q9BWW9 433 aa26.26■■□□□ 1.79
CPNE1-223ENST00000475146 GPR62Q9BZJ7 368 aa26.26■■□□□ 1.79
CPNE1-223ENST00000475146 USP15Q9Y4E8 981 aaPredicted RBP26.26■■□□□ 1.79
CPNE1-223ENST00000475146 VCANP13611 3396 aa26.26■■□□□ 1.79
CPNE1-223ENST00000475146 SMIM28A0A1B0GU29 152 aa26.25■■□□□ 1.79
CPNE1-223ENST00000475146 EFEMP2O95967 443 aa26.25■■□□□ 1.79
CPNE1-223ENST00000475146 CNPP09543 421 aaKnown RBP26.25■■□□□ 1.79
CPNE1-223ENST00000475146 GAP43P17677 238 aa26.25■■□□□ 1.79
CPNE1-223ENST00000475146 KLRC2P26717 231 aa26.25■■□□□ 1.79
CPNE1-223ENST00000475146 GTF2BQ00403 316 aa26.25■■□□□ 1.79
CPNE1-223ENST00000475146 ZC2HC1CQ53FD0 456 aaPredicted RBP26.25■■□□□ 1.79
CPNE1-223ENST00000475146 AXDND1Q5T1B0 1012 aaPredicted RBP26.25■■□□□ 1.79
CPNE1-223ENST00000475146 PPFIBP1Q86W92 1011 aa26.25■■□□□ 1.79
CPNE1-223ENST00000475146 B3GALT6Q96L58 329 aa26.25■■□□□ 1.79
CPNE1-223ENST00000475146 SEL1LQ9UBV2 794 aa26.25■■□□□ 1.79
CPNE1-223ENST00000475146 PCDHA7Q9UN72 937 aa26.25■■□□□ 1.79
CPNE1-223ENST00000475146 LILRB3O75022 631 aa26.24■■□□□ 1.79
CPNE1-223ENST00000475146 PIGRP01833 764 aa26.24■■□□□ 1.79
CPNE1-223ENST00000475146 EPCAMP16422 314 aa26.24■■□□□ 1.79
CPNE1-223ENST00000475146 HOXB8P17481 243 aaPredicted RBP26.24■■□□□ 1.79
CPNE1-223ENST00000475146 DSG1Q02413 1049 aa26.24■■□□□ 1.79
CPNE1-223ENST00000475146 USP41Q3LFD5 358 aa26.24■■□□□ 1.79
CPNE1-223ENST00000475146 XKR4Q5GH76 650 aa26.24■■□□□ 1.79
CPNE1-223ENST00000475146 ALKAL1Q6UXT8 129 aa26.24■■□□□ 1.79
CPNE1-223ENST00000475146 MAP4K3Q8IVH8 894 aa26.24■■□□□ 1.79
CPNE1-223ENST00000475146 STAMQ92783 540 aa26.24■■□□□ 1.79
CPNE1-223ENST00000475146 HAPLN2Q9GZV7 340 aa26.24■■□□□ 1.79
CPNE1-223ENST00000475146 MRPL44Q9H9J2 332 aaKnown RBP26.24■■□□□ 1.79
CPNE1-223ENST00000475146 GOLGA2P5Q9HBQ8 144 aa26.24■■□□□ 1.79
CPNE1-223ENST00000475146 SLC38A7Q9NVC3 462 aa26.24■■□□□ 1.79
CPNE1-223ENST00000475146 TBC1D7Q9P0N9 293 aa26.24■■□□□ 1.79
CPNE1-223ENST00000475146 PRKAG3Q9UGI9 489 aa26.24■■□□□ 1.79
CPNE1-223ENST00000475146 ZP2Q05996 745 aa26.23■■□□□ 1.79
CPNE1-223ENST00000475146 E2F4Q16254 413 aa26.23■■□□□ 1.79
CPNE1-223ENST00000475146 TPRNQ4KMQ1 711 aa26.23■■□□□ 1.79
CPNE1-223ENST00000475146 SYCE2Q6PIF2 218 aa26.23■■□□□ 1.79
CPNE1-223ENST00000475146 ADHFE1Q8IWW8 467 aa26.23■■□□□ 1.79
CPNE1-223ENST00000475146 GJD3Q8N144 294 aa26.23■■□□□ 1.79
CPNE1-223ENST00000475146 IQUBQ8NA54 791 aa26.23■■□□□ 1.79
CPNE1-223ENST00000475146 SLC22A17Q8WUG5 538 aa26.23■■□□□ 1.79
CPNE1-223ENST00000475146 UROC1Q96N76 676 aa26.23■■□□□ 1.79
CPNE1-223ENST00000475146 CUEDC2Q9H467 287 aa26.23■■□□□ 1.79
CPNE1-223ENST00000475146 ST6GALNAC4Q9H4F1 302 aa26.23■■□□□ 1.79
CPNE1-223ENST00000475146 DZANK1Q9NVP4 752 aa26.23■■□□□ 1.79
CPNE1-223ENST00000475146 FAM13BQ9NYF5 915 aa26.23■■□□□ 1.79
CPNE1-223ENST00000475146 CNTN3Q9P232 1028 aa26.23■■□□□ 1.79
CPNE1-223ENST00000475146 ZDHHC9Q9Y397 364 aa26.23■■□□□ 1.79
CPNE1-223ENST00000475146 TRIP11Q15643 1979 aa26.23■■□□□ 1.79
CPNE1-223ENST00000475146 CITO14578 2027 aa26.22■■□□□ 1.79
CPNE1-223ENST00000475146 SPDYE4A6NLX3 237 aa26.22■■□□□ 1.79
CPNE1-223ENST00000475146 B3GAT3O94766 335 aa26.22■■□□□ 1.79
CPNE1-223ENST00000475146 ADH1AP07327 375 aa26.22■■□□□ 1.79
CPNE1-223ENST00000475146 CLTAP09496 248 aa26.22■■□□□ 1.79
CPNE1-223ENST00000475146 CXCL8P10145 99 aa26.22■■□□□ 1.79
CPNE1-223ENST00000475146 KCNE1P15382 129 aa26.22■■□□□ 1.79
CPNE1-223ENST00000475146 CLCNKBP51801 687 aa26.22■■□□□ 1.79
CPNE1-223ENST00000475146 HERC4Q5GLZ8 1057 aaPredicted RBP26.22■■□□□ 1.79
CPNE1-223ENST00000475146 KIAA0319Q5VV43 1072 aa26.22■■□□□ 1.79
CPNE1-223ENST00000475146 ZNF720Q7Z2F6 126 aa26.22■■□□□ 1.79
CPNE1-223ENST00000475146 RIN2Q8WYP3 895 aaPredicted RBP26.22■■□□□ 1.79
CPNE1-223ENST00000475146 ZMAT2Q96NC0 199 aaKnown RBP26.22■■□□□ 1.79
CPNE1-223ENST00000475146 LRRC27Q9C0I9 530 aa26.22■■□□□ 1.79
CPNE1-223ENST00000475146 TNMDQ9H2S6 317 aa26.22■■□□□ 1.79
CPNE1-223ENST00000475146 CD320Q9NPF0 282 aa26.22■■□□□ 1.79
CPNE1-223ENST00000475146 CHST7Q9NS84 486 aa26.22■■□□□ 1.79
CPNE1-223ENST00000475146 PANK4Q9NVE7 773 aa26.22■■□□□ 1.79
CPNE1-223ENST00000475146 RCOR1Q9UKL0 485 aa26.22■■□□□ 1.79
CPNE1-223ENST00000475146 TEX28O15482 410 aa26.21■■□□□ 1.79
CPNE1-223ENST00000475146 SOX4Q06945 474 aaPredicted RBP26.21■■□□□ 1.79
CPNE1-223ENST00000475146 ELAVL2Q12926 359 aaKnown RBP26.21■■□□□ 1.79
CPNE1-223ENST00000475146 KYAT1Q16773 422 aa26.21■■□□□ 1.79
CPNE1-223ENST00000475146 SLC10A6Q3KNW5 377 aa26.21■■□□□ 1.79
CPNE1-223ENST00000475146 FAM171A1Q5VUB5 890 aa26.21■■□□□ 1.79
CPNE1-223ENST00000475146 SLC39A4Q6P5W5 647 aa26.21■■□□□ 1.79
CPNE1-223ENST00000475146 CEP57Q86XR8 500 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms