RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 ZMYM2Q9UBW7 1377 aa11.03□□□□□ -0.64
PKP4-203ENST00000411900 WDFY4Q6ZS81 3184 aa11.03□□□□□ -0.64
PKP4-203ENST00000411900 DOCK6Q96HP0 2047 aa11.03□□□□□ -0.64
PKP4-203ENST00000411900 CCDC195A0A1B0GUA6 201 aa11.03□□□□□ -0.64
PKP4-203ENST00000411900 I3L4J1 428 aa11.03□□□□□ -0.64
PKP4-203ENST00000411900 TGM5O43548 720 aa11.03□□□□□ -0.64
PKP4-203ENST00000411900 GUCY2CP25092 1073 aa11.03□□□□□ -0.64
PKP4-203ENST00000411900 CLCNKBP51801 687 aa11.03□□□□□ -0.64
PKP4-203ENST00000411900 SLC12A3P55017 1021 aa11.03□□□□□ -0.64
PKP4-203ENST00000411900 SF3A1Q15459 793 aaKnown RBP11.03□□□□□ -0.64
PKP4-203ENST00000411900 TMEM119Q4V9L6 283 aa11.03□□□□□ -0.64
PKP4-203ENST00000411900 SEZ6Q53EL9 994 aa11.03□□□□□ -0.64
PKP4-203ENST00000411900 HYIQ5T013 277 aa11.03□□□□□ -0.64
PKP4-203ENST00000411900 ARL6IP4Q66PJ3 421 aaKnown RBP11.03□□□□□ -0.64
PKP4-203ENST00000411900 KREMEN2Q8NCW0 462 aa11.03□□□□□ -0.64
PKP4-203ENST00000411900 RASSF8Q8NHQ8 419 aa11.03□□□□□ -0.64
PKP4-203ENST00000411900 LRRC15Q8TF66 581 aa11.03□□□□□ -0.64
PKP4-203ENST00000411900 CCDC94Q9BW85 323 aaPredicted RBP11.03□□□□□ -0.64
PKP4-203ENST00000411900 NT5C3AQ9H0P0 336 aa11.03□□□□□ -0.64
PKP4-203ENST00000411900 TMEM134Q9H6X4 195 aa11.03□□□□□ -0.64
PKP4-203ENST00000411900 ANKFY1Q9P2R3 1169 aa11.03□□□□□ -0.64
PKP4-203ENST00000411900 KMT2EQ8IZD2 1858 aa11.03□□□□□ -0.64
PKP4-203ENST00000411900 BRD1O95696 1058 aa11.02□□□□□ -0.65
PKP4-203ENST00000411900 PLS3P13797 630 aa11.02□□□□□ -0.65
PKP4-203ENST00000411900 UBA7P41226 1012 aa11.02□□□□□ -0.65
PKP4-203ENST00000411900 GRM5P41594 1212 aa11.02□□□□□ -0.65
PKP4-203ENST00000411900 MATR3P43243 847 aaKnown RBP eCLIP11.02□□□□□ -0.651e-6■■■■□ 23.3
PKP4-203ENST00000411900 YARSP54577 528 aaKnown RBP11.02□□□□□ -0.65
PKP4-203ENST00000411900 SOX4Q06945 474 aaPredicted RBP11.02□□□□□ -0.65
PKP4-203ENST00000411900 SIGLEC14Q08ET2 396 aa11.02□□□□□ -0.65
PKP4-203ENST00000411900 STRN3Q13033 797 aa11.02□□□□□ -0.65
PKP4-203ENST00000411900 KARSQ15046 597 aaKnown RBP11.02□□□□□ -0.65
PKP4-203ENST00000411900 ARSHQ5FYA8 562 aa11.02□□□□□ -0.65
PKP4-203ENST00000411900 SPECC1Q5M775 1068 aa11.02□□□□□ -0.65
PKP4-203ENST00000411900 FAM173BQ6P4H8 233 aa11.02□□□□□ -0.65
PKP4-203ENST00000411900 CCDC149Q6ZUS6 474 aa11.02□□□□□ -0.65
PKP4-203ENST00000411900 BRAPQ7Z569 592 aa11.02□□□□□ -0.65
PKP4-203ENST00000411900 APBB1IPQ7Z5R6 666 aaPredicted RBP11.02□□□□□ -0.65
PKP4-203ENST00000411900 GPBP1Q86WP2 473 aa11.02□□□□□ -0.65
PKP4-203ENST00000411900 TMEM130Q8N3G9 435 aa11.02□□□□□ -0.65
PKP4-203ENST00000411900 CALML4Q96GE6 196 aa11.02□□□□□ -0.65
PKP4-203ENST00000411900 INTS4Q96HW7 963 aaKnown RBP11.02□□□□□ -0.65
PKP4-203ENST00000411900 MFSD14AQ96MC6 490 aa11.02□□□□□ -0.65
PKP4-203ENST00000411900 PPP1R10Q96QC0 940 aaKnown RBP11.02□□□□□ -0.65
PKP4-203ENST00000411900 TTPALQ9BTX7 342 aa11.02□□□□□ -0.65
PKP4-203ENST00000411900 PTPRHQ9HD43 1115 aa11.02□□□□□ -0.65
PKP4-203ENST00000411900 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.02□□□□□ -0.65
PKP4-203ENST00000411900 CLIC4Q9Y696 253 aa11.02□□□□□ -0.65
PKP4-203ENST00000411900 ZNF318Q5VUA4 2279 aa11.01□□□□□ -0.65
PKP4-203ENST00000411900 SMIM28A0A1B0GU29 152 aa11.01□□□□□ -0.65
PKP4-203ENST00000411900 ABLIM1O14639 778 aa11.01□□□□□ -0.65
PKP4-203ENST00000411900 ADAM12O43184 909 aa11.01□□□□□ -0.65
PKP4-203ENST00000411900 B3GAT3O94766 335 aa11.01□□□□□ -0.65
PKP4-203ENST00000411900 PDGFBP01127 241 aaPredicted RBP11.01□□□□□ -0.65
PKP4-203ENST00000411900 MAPTP10636 758 aaKnown RBP11.01□□□□□ -0.65
PKP4-203ENST00000411900 PLCG1P19174 1290 aa11.01□□□□□ -0.65
PKP4-203ENST00000411900 MARCKSP29966 332 aaPredicted RBP11.01□□□□□ -0.65
PKP4-203ENST00000411900 BRCC3P46736 316 aa11.01□□□□□ -0.65
PKP4-203ENST00000411900 SMTNP53814 917 aa11.01□□□□□ -0.65
PKP4-203ENST00000411900 CEBPZQ03701 1054 aaKnown RBP11.01□□□□□ -0.65
PKP4-203ENST00000411900 MTMR3Q13615 1198 aa11.01□□□□□ -0.65
PKP4-203ENST00000411900 MCM6Q14566 821 aa11.01□□□□□ -0.65
PKP4-203ENST00000411900 PSMD5Q16401 504 aa11.01□□□□□ -0.65
PKP4-203ENST00000411900 MPZL3Q6UWV2 235 aa11.01□□□□□ -0.65
PKP4-203ENST00000411900 C3orf58Q8NDZ4 430 aa11.01□□□□□ -0.65
PKP4-203ENST00000411900 TMEM161BQ8NDZ6 487 aa11.01□□□□□ -0.65
PKP4-203ENST00000411900 ST13P5Q8NFI4 369 aaPredicted RBP11.01□□□□□ -0.65
PKP4-203ENST00000411900 LNX1Q8TBB1 728 aaPredicted RBP11.01□□□□□ -0.65
PKP4-203ENST00000411900 SMG7Q92540 1137 aaKnown RBP11.01□□□□□ -0.65
PKP4-203ENST00000411900 ASIC4Q96FT7 647 aa11.01□□□□□ -0.65
PKP4-203ENST00000411900 BICD1Q96G01 975 aa11.01□□□□□ -0.65
PKP4-203ENST00000411900 ZMAT2Q96NC0 199 aaKnown RBP11.01□□□□□ -0.65
PKP4-203ENST00000411900 ACAP3Q96P50 834 aa11.01□□□□□ -0.65
PKP4-203ENST00000411900 CLSTN3Q9BQT9 956 aa11.01□□□□□ -0.65
PKP4-203ENST00000411900 REEP2Q9BRK0 252 aa11.01□□□□□ -0.65
PKP4-203ENST00000411900 TIPINQ9BVW5 301 aa11.01□□□□□ -0.65
PKP4-203ENST00000411900 ZHX3Q9H4I2 956 aa11.01□□□□□ -0.65
PKP4-203ENST00000411900 C17orf75Q9HAS0 396 aa11.01□□□□□ -0.65
PKP4-203ENST00000411900 PIDD1Q9HB75 910 aa11.01□□□□□ -0.65
PKP4-203ENST00000411900 BLOC1S4Q9NUP1 217 aa11.01□□□□□ -0.65
PKP4-203ENST00000411900 FNIP2Q9P278 1114 aa11.01□□□□□ -0.65
PKP4-203ENST00000411900 DAXXQ9UER7 740 aaPredicted RBP11.01□□□□□ -0.65
PKP4-203ENST00000411900 MYH15Q9Y2K3 1946 aa11.01□□□□□ -0.65
PKP4-203ENST00000411900 MEFVO15553 781 aaPredicted RBP11□□□□□ -0.65
PKP4-203ENST00000411900 N4BP1O75113 896 aaKnown RBP11□□□□□ -0.65
PKP4-203ENST00000411900 FAM13AO94988 1023 aa11□□□□□ -0.65
PKP4-203ENST00000411900 KRT18P05783 430 aaKnown RBP11□□□□□ -0.65
PKP4-203ENST00000411900 MCF2P10911 925 aa11□□□□□ -0.65
PKP4-203ENST00000411900 SYT1P21579 422 aa11□□□□□ -0.65
PKP4-203ENST00000411900 PROZP22891 400 aa11□□□□□ -0.65
PKP4-203ENST00000411900 TKTP29401 623 aaKnown RBP11□□□□□ -0.65
PKP4-203ENST00000411900 GBP2P32456 591 aaPredicted RBP11□□□□□ -0.65
PKP4-203ENST00000411900 VCPP55072 806 aaKnown RBP11□□□□□ -0.65
PKP4-203ENST00000411900 CREMQ03060 361 aa11□□□□□ -0.65
PKP4-203ENST00000411900 SPAG1Q07617 926 aa11□□□□□ -0.65
PKP4-203ENST00000411900 RESTQ13127 1097 aa11□□□□□ -0.65
PKP4-203ENST00000411900 NOLC1Q14978 699 aaKnown RBP eCLIP11□□□□□ -0.65
PKP4-203ENST00000411900 UPP1Q16831 310 aa11□□□□□ -0.65
PKP4-203ENST00000411900 IER5LQ5T953 404 aa11□□□□□ -0.65
PKP4-203ENST00000411900 LILRA6Q6PI73 481 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms