RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 TEX28O15482 410 aa15.95■□□□□ 0.14
NIF3L1-205ENST00000409588 PAPLNO95428 1278 aa15.95■□□□□ 0.14
NIF3L1-205ENST00000409588 SSBP05455 408 aaKnown RBP eCLIP15.95■□□□□ 0.14
NIF3L1-205ENST00000409588 EPCAMP16422 314 aa15.95■□□□□ 0.14
NIF3L1-205ENST00000409588 GRM5P41594 1212 aa15.95■□□□□ 0.14
NIF3L1-205ENST00000409588 MAPK7Q13164 816 aa15.95■□□□□ 0.14
NIF3L1-205ENST00000409588 TMEM119Q4V9L6 283 aa15.95■□□□□ 0.14
NIF3L1-205ENST00000409588 XKR4Q5GH76 650 aa15.95■□□□□ 0.14
NIF3L1-205ENST00000409588 DCLRE1AQ6PJP8 1040 aa15.95■□□□□ 0.14
NIF3L1-205ENST00000409588 ZPBP2Q6X784 338 aa15.95■□□□□ 0.14
NIF3L1-205ENST00000409588 TAS1R1Q7RTX1 841 aa15.95■□□□□ 0.14
NIF3L1-205ENST00000409588 DDX27Q96GQ7 796 aaKnown RBP15.95■□□□□ 0.14
NIF3L1-205ENST00000409588 TCHPQ9BT92 498 aa15.95■□□□□ 0.14
NIF3L1-205ENST00000409588 RUSC1Q9BVN2 902 aa15.95■□□□□ 0.14
NIF3L1-205ENST00000409588 TMEM121BQ9BXQ6 578 aaPredicted RBP15.95■□□□□ 0.14
NIF3L1-205ENST00000409588 ZSCAN16Q9H4T2 348 aaPredicted RBP15.95■□□□□ 0.14
NIF3L1-205ENST00000409588 MUTYHQ9UIF7 546 aa15.95■□□□□ 0.14
NIF3L1-205ENST00000409588 TMEM189-UBE2V1I3L0A0 370 aa15.94■□□□□ 0.14
NIF3L1-205ENST00000409588 PTGESO14684 152 aa15.94■□□□□ 0.14
NIF3L1-205ENST00000409588 TOM1L1O75674 476 aa15.94■□□□□ 0.14
NIF3L1-205ENST00000409588 GLUD1P00367 558 aa15.94■□□□□ 0.14
NIF3L1-205ENST00000409588 CHRM1P11229 460 aaPredicted RBP15.94■□□□□ 0.14
NIF3L1-205ENST00000409588 PROZP22891 400 aa15.94■□□□□ 0.14
NIF3L1-205ENST00000409588 ZXDAP98168 799 aa15.94■□□□□ 0.14
NIF3L1-205ENST00000409588 SF3A1Q15459 793 aaKnown RBP15.94■□□□□ 0.14
NIF3L1-205ENST00000409588 KYAT1Q16773 422 aa15.94■□□□□ 0.14
NIF3L1-205ENST00000409588 RARS2Q5T160 578 aaKnown RBP15.94■□□□□ 0.14
NIF3L1-205ENST00000409588 EEF1DP3Q658K8 133 aa15.94■□□□□ 0.14
NIF3L1-205ENST00000409588 ALKAL1Q6UXT8 129 aa15.94■□□□□ 0.14
NIF3L1-205ENST00000409588 RTL10Q7L3V2 364 aa15.94■□□□□ 0.14
NIF3L1-205ENST00000409588 KCNK18Q7Z418 384 aa15.94■□□□□ 0.14
NIF3L1-205ENST00000409588 ZDHHC14Q8IZN3 488 aa15.94■□□□□ 0.14
NIF3L1-205ENST00000409588 ACSF2Q96CM8 615 aaPredicted RBP15.94■□□□□ 0.14
NIF3L1-205ENST00000409588 ACAP3Q96P50 834 aa15.94■□□□□ 0.14
NIF3L1-205ENST00000409588 TSPAN18Q96SJ8 248 aa15.94■□□□□ 0.14
NIF3L1-205ENST00000409588 TTPALQ9BTX7 342 aa15.94■□□□□ 0.14
NIF3L1-205ENST00000409588 KIFC3Q9BVG8 833 aa15.94■□□□□ 0.14
NIF3L1-205ENST00000409588 GPR62Q9BZJ7 368 aa15.94■□□□□ 0.14
NIF3L1-205ENST00000409588 CCSER1Q9C0I3 900 aa15.94■□□□□ 0.14
NIF3L1-205ENST00000409588 POLD4Q9HCU8 107 aa15.94■□□□□ 0.14
NIF3L1-205ENST00000409588 GDAQ9Y2T3 454 aa15.94■□□□□ 0.14
NIF3L1-205ENST00000409588 MORC2Q9Y6X9 1032 aaPredicted RBP15.94■□□□□ 0.14
NIF3L1-205ENST00000409588 VPS37CA5D8V6 355 aaPredicted RBP15.93■□□□□ 0.14
NIF3L1-205ENST00000409588 C2CD2LO14523 706 aa15.93■□□□□ 0.14
NIF3L1-205ENST00000409588 SYT1P21579 422 aa15.93■□□□□ 0.14
NIF3L1-205ENST00000409588 RPL9P32969 192 aaKnown RBP15.93■□□□□ 0.14
NIF3L1-205ENST00000409588 DDIT3P35638 169 aa15.93■□□□□ 0.14
NIF3L1-205ENST00000409588 NAB2Q15742 525 aa15.93■□□□□ 0.14
NIF3L1-205ENST00000409588 MPZL3Q6UWV2 235 aa15.93■□□□□ 0.14
NIF3L1-205ENST00000409588 TRIM67Q6ZTA4 783 aa15.93■□□□□ 0.14
NIF3L1-205ENST00000409588 OTOP3Q7RTS5 596 aa15.93■□□□□ 0.14
NIF3L1-205ENST00000409588 UBALD2Q8IYN6 164 aa15.93■□□□□ 0.14
NIF3L1-205ENST00000409588 TMEM161BQ8NDZ6 487 aa15.93■□□□□ 0.14
NIF3L1-205ENST00000409588 PPP1R10Q96QC0 940 aaKnown RBP15.93■□□□□ 0.14
NIF3L1-205ENST00000409588 APOL5Q9BWW9 433 aa15.93■□□□□ 0.14
NIF3L1-205ENST00000409588 POMKQ9H5K3 350 aa15.93■□□□□ 0.14
NIF3L1-205ENST00000409588 ZDHHC7Q9NXF8 308 aa15.93■□□□□ 0.14
NIF3L1-205ENST00000409588 CCDC39Q9UFE4 941 aa15.93■□□□□ 0.14
NIF3L1-205ENST00000409588 TDRD15B5MCY1 1934 aaKnown RBP15.93■□□□□ 0.14
NIF3L1-205ENST00000409588 SMIM28A0A1B0GU29 152 aa15.92■□□□□ 0.14
NIF3L1-205ENST00000409588 SFI1A8K8P3 1242 aa15.92■□□□□ 0.14
NIF3L1-205ENST00000409588 SLC16A4O15374 487 aa15.92■□□□□ 0.14
NIF3L1-205ENST00000409588 CLDN3O15551 220 aa15.92■□□□□ 0.14
NIF3L1-205ENST00000409588 MAPTP10636 758 aaKnown RBP15.92■□□□□ 0.14
NIF3L1-205ENST00000409588 KCNE1P15382 129 aa15.92■□□□□ 0.14
NIF3L1-205ENST00000409588 SIGLEC14Q08ET2 396 aa15.92■□□□□ 0.14
NIF3L1-205ENST00000409588 PTPN21Q16825 1174 aa15.92■□□□□ 0.14
NIF3L1-205ENST00000409588 ZNF568Q3ZCX4 644 aa15.92■□□□□ 0.14
NIF3L1-205ENST00000409588 LILRA6Q6PI73 481 aa15.92■□□□□ 0.14
NIF3L1-205ENST00000409588 TMC5Q6UXY8 1006 aa15.92■□□□□ 0.14
NIF3L1-205ENST00000409588 C12orf76Q8N812 135 aaPredicted RBP15.92■□□□□ 0.14
NIF3L1-205ENST00000409588 RASSF8Q8NHQ8 419 aa15.92■□□□□ 0.14
NIF3L1-205ENST00000409588 RIN2Q8WYP3 895 aaPredicted RBP15.92■□□□□ 0.14
NIF3L1-205ENST00000409588 PIK3R5Q8WYR1 880 aa15.92■□□□□ 0.14
NIF3L1-205ENST00000409588 STAMQ92783 540 aa15.92■□□□□ 0.14
NIF3L1-205ENST00000409588 MARVELD3Q96A59 401 aa15.92■□□□□ 0.14
NIF3L1-205ENST00000409588 TARS2Q9BW92 718 aaKnown RBP15.92■□□□□ 0.14
NIF3L1-205ENST00000409588 CDT1Q9H211 546 aa15.92■□□□□ 0.14
NIF3L1-205ENST00000409588 PLEKHA5Q9HAU0 1116 aa15.92■□□□□ 0.14
NIF3L1-205ENST00000409588 SRPRBQ9Y5M8 271 aaKnown RBP15.92■□□□□ 0.14
NIF3L1-205ENST00000409588 K7ELQ4 463 aaPredicted RBP15.91■□□□□ 0.14
NIF3L1-205ENST00000409588 EDN1P05305 212 aa15.91■□□□□ 0.14
NIF3L1-205ENST00000409588 TXLNAP40222 546 aa15.91■□□□□ 0.14
NIF3L1-205ENST00000409588 ZNF131P52739 623 aa15.91■□□□□ 0.14
NIF3L1-205ENST00000409588 NCKAP1LP55160 1127 aa15.91■□□□□ 0.14
NIF3L1-205ENST00000409588 UPP1Q16831 310 aa15.91■□□□□ 0.14
NIF3L1-205ENST00000409588 UVSSAQ2YD98 709 aa15.91■□□□□ 0.14
NIF3L1-205ENST00000409588 ARSHQ5FYA8 562 aa15.91■□□□□ 0.14
NIF3L1-205ENST00000409588 FAM171A1Q5VUB5 890 aa15.91■□□□□ 0.14
NIF3L1-205ENST00000409588 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.91■□□□□ 0.14
NIF3L1-205ENST00000409588 TAS1R3Q7RTX0 852 aa15.91■□□□□ 0.14
NIF3L1-205ENST00000409588 PLIN2Q99541 437 aa15.91■□□□□ 0.14
NIF3L1-205ENST00000409588 PRRX2Q99811 253 aa15.91■□□□□ 0.14
NIF3L1-205ENST00000409588 PARVGQ9HBI0 331 aa15.91■□□□□ 0.14
NIF3L1-205ENST00000409588 MAN1C1Q9NR34 630 aa15.91■□□□□ 0.14
NIF3L1-205ENST00000409588 SORCS3Q9UPU3 1222 aa15.91■□□□□ 0.14
NIF3L1-205ENST00000409588 CCDC195A0A1B0GUA6 201 aa15.9■□□□□ 0.14
NIF3L1-205ENST00000409588 FAM86C2PA6NEL3 165 aa15.9■□□□□ 0.14
NIF3L1-205ENST00000409588 CASTOR2A6NHX0 329 aa15.9■□□□□ 0.14
NIF3L1-205ENST00000409588 B3GAT3O94766 335 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms