RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 GOLGA8KD6RF30 607 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 TGFB1I1O43294 461 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 USP2O75604 605 aaPredicted RBP14.98□□□□□ -0.01
SCAF4-202ENST00000399804 CALB1P05937 261 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 GYS2P54840 703 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 SGSM1Q2NKQ1 1148 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 PPP1R21Q6ZMI0 780 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 WHAMMQ8TF30 809 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 TRAPPC12Q8WVT3 735 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 RUNDC3BQ96NL0 473 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 ALG6Q9Y672 507 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 AKAP11Q9UKA4 1901 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 ANKRD63C9JTQ0 380 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 BUB1BO60566 1050 aaPredicted RBP14.98□□□□□ -0.01
SCAF4-202ENST00000399804 TOM1L1O75674 476 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 MAN1A1P33908 653 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 SF3A3Q12874 501 aaKnown RBP eCLIP14.98□□□□□ -0.011e-7■■■□□ 16.1
SCAF4-202ENST00000399804 TRAPPC11Q7Z392 1133 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 BEST2Q8NFU1 509 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 LENG9Q96B70 501 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 HAUS1Q96CS2 278 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 TXNDC16Q9P2K2 825 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 CPA4Q9UI42 421 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 OGTO15294 1046 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 SART1O43290 800 aaKnown RBP14.98□□□□□ -0.01
SCAF4-202ENST00000399804 GAS2O43903 313 aaKnown RBP14.98□□□□□ -0.01
SCAF4-202ENST00000399804 ATP5DP30049 168 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 PSMC1P62191 440 aaKnown RBP14.98□□□□□ -0.01
SCAF4-202ENST00000399804 ERVK-9P63128 1117 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 CYP24A1Q07973 514 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 PLCD3Q8N3E9 789 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 PPP1R14CQ8TAE6 165 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 ATP8B4Q8TF62 1192 aa14.98□□□□□ -0.01
SCAF4-202ENST00000399804 INPP4AQ96PE3 977 aaPredicted RBP14.98□□□□□ -0.01
SCAF4-202ENST00000399804 CCNE2O96020 404 aa14.97□□□□□ -0.01
SCAF4-202ENST00000399804 KRT15P19012 456 aa14.97□□□□□ -0.01
SCAF4-202ENST00000399804 GBP1P32455 592 aa14.97□□□□□ -0.01
SCAF4-202ENST00000399804 DGKDQ16760 1214 aa14.97□□□□□ -0.01
SCAF4-202ENST00000399804 BSPRYQ5W0U4 402 aa14.97□□□□□ -0.01
SCAF4-202ENST00000399804 KCTD6Q8NC69 237 aa14.97□□□□□ -0.01
SCAF4-202ENST00000399804 NSRP1Q9H0G5 558 aaKnown RBP14.97□□□□□ -0.01
SCAF4-202ENST00000399804 LRRC4Q9HBW1 653 aa14.97□□□□□ -0.01
SCAF4-202ENST00000399804 PIN4Q9Y237 131 aaKnown RBP14.97□□□□□ -0.01
SCAF4-202ENST00000399804 CNTNAP1P78357 1384 aa14.97□□□□□ -0.01
SCAF4-202ENST00000399804 LMNB2Q03252 620 aa14.97□□□□□ -0.01
SCAF4-202ENST00000399804 CUL1Q13616 776 aa14.97□□□□□ -0.01
SCAF4-202ENST00000399804 TTC19Q6DKK2 380 aaPredicted RBP14.97□□□□□ -0.01
SCAF4-202ENST00000399804 ANO5Q75V66 913 aa14.97□□□□□ -0.01
SCAF4-202ENST00000399804 PLEKHH3Q7Z736 793 aa14.97□□□□□ -0.01
SCAF4-202ENST00000399804 TMEM139Q8IV31 216 aa14.97□□□□□ -0.01
SCAF4-202ENST00000399804 TMC2Q8TDI7 906 aa14.97□□□□□ -0.01
SCAF4-202ENST00000399804 ZBTB45Q96K62 511 aaPredicted RBP14.97□□□□□ -0.01
SCAF4-202ENST00000399804 FAM193BQ96PV7 902 aaPredicted RBP14.97□□□□□ -0.01
SCAF4-202ENST00000399804 COL22A1Q8NFW1 1626 aaPredicted RBP14.97□□□□□ -0.01
SCAF4-202ENST00000399804 M0QYV0 167 aa14.97□□□□□ -0.01
SCAF4-202ENST00000399804 CYP2C9P11712 490 aa14.97□□□□□ -0.01
SCAF4-202ENST00000399804 ARHGAP25P42331 645 aa14.97□□□□□ -0.01
SCAF4-202ENST00000399804 GNGT1P63211 74 aa14.97□□□□□ -0.01
SCAF4-202ENST00000399804 PPIL2Q13356 520 aa14.97□□□□□ -0.01
SCAF4-202ENST00000399804 MMS22LQ6ZRQ5 1243 aa14.97□□□□□ -0.01
SCAF4-202ENST00000399804 TPCN2Q8NHX9 752 aa14.97□□□□□ -0.01
SCAF4-202ENST00000399804 PARD3BQ8TEW8 1205 aa14.97□□□□□ -0.01
SCAF4-202ENST00000399804 DHX38Q92620 1227 aaKnown RBP14.97□□□□□ -0.01
SCAF4-202ENST00000399804 MBOAT7Q96N66 472 aa14.97□□□□□ -0.01
SCAF4-202ENST00000399804 WNT8AQ9H1J5 351 aa14.97□□□□□ -0.01
SCAF4-202ENST00000399804 DNAJC17Q9NVM6 304 aaKnown RBP14.97□□□□□ -0.01
SCAF4-202ENST00000399804 PCSK1NQ9UHG2 260 aa14.97□□□□□ -0.01
SCAF4-202ENST00000399804 A6NJR5 290 aa14.96□□□□□ -0.01
SCAF4-202ENST00000399804 ARMCX2Q7L311 632 aa14.96□□□□□ -0.01
SCAF4-202ENST00000399804 SLC20A1Q8WUM9 679 aa14.96□□□□□ -0.01
SCAF4-202ENST00000399804 SENP7Q9BQF6 1050 aa14.96□□□□□ -0.01
SCAF4-202ENST00000399804 PPANQ9NQ55 473 aaKnown RBP14.96□□□□□ -0.01
SCAF4-202ENST00000399804 MYPNQ86TC9 1320 aa14.96□□□□□ -0.01
SCAF4-202ENST00000399804 PRPSAP2O60256 369 aa14.96□□□□□ -0.01
SCAF4-202ENST00000399804 STK10O94804 968 aaKnown RBP14.96□□□□□ -0.01
SCAF4-202ENST00000399804 INSRRP14616 1297 aa14.96□□□□□ -0.01
SCAF4-202ENST00000399804 ADORA2AP29274 412 aa14.96□□□□□ -0.01
SCAF4-202ENST00000399804 DLG4P78352 724 aa14.96□□□□□ -0.01
SCAF4-202ENST00000399804 PPP3CAQ08209 521 aa14.96□□□□□ -0.01
SCAF4-202ENST00000399804 C2CD6Q53TS8 623 aa14.96□□□□□ -0.01
SCAF4-202ENST00000399804 MAP4K3Q8IVH8 894 aa14.96□□□□□ -0.01
SCAF4-202ENST00000399804 COPS5Q92905 334 aa14.96□□□□□ -0.01
SCAF4-202ENST00000399804 RRAGCQ9HB90 399 aa14.96□□□□□ -0.01
SCAF4-202ENST00000399804 KCND1Q9NSA2 647 aa14.96□□□□□ -0.01
SCAF4-202ENST00000399804 UVRAGQ9P2Y5 699 aa14.96□□□□□ -0.01
SCAF4-202ENST00000399804 TTLL3Q9Y4R7 772 aa14.96□□□□□ -0.01
SCAF4-202ENST00000399804 LAMTOR4Q0VGL1 99 aa14.96□□□□□ -0.02
SCAF4-202ENST00000399804 MFSD14CQ5VZR4 134 aa14.96□□□□□ -0.02
SCAF4-202ENST00000399804 PAPD7Q5XG87 772 aaKnown RBP14.96□□□□□ -0.02
SCAF4-202ENST00000399804 CASC4Q6P4E1 433 aa14.96□□□□□ -0.02
SCAF4-202ENST00000399804 TAOK1Q7L7X3 1001 aa14.96□□□□□ -0.02
SCAF4-202ENST00000399804 TATDN2Q93075 761 aa14.96□□□□□ -0.02
SCAF4-202ENST00000399804 MTMR12Q9C0I1 747 aa14.96□□□□□ -0.02
SCAF4-202ENST00000399804 ANAPC5Q9UJX4 755 aa14.96□□□□□ -0.02
SCAF4-202ENST00000399804 SNX9Q9Y5X1 595 aa14.96□□□□□ -0.02
SCAF4-202ENST00000399804 FAM169AQ9Y6X4 670 aa14.96□□□□□ -0.02
SCAF4-202ENST00000399804 A6NNZ2 444 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 H3BRB1 525 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 MMEP08473 750 aa14.95□□□□□ -0.02
SCAF4-202ENST00000399804 COMTP21964 271 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms