RNA–Protein interactions for RNA: ENST00000358309.3

CX3CR1-201, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

TSL 2 BASIC

Gene CX3CR1, Length 3,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-201ENST00000358309 REPS2Q8NFH8 660 aa6.73□□□□□ -1.33
CX3CR1-201ENST00000358309 ZNF516Q92618 1163 aa6.73□□□□□ -1.33
CX3CR1-201ENST00000358309 KRT35Q92764 455 aa6.73□□□□□ -1.33
CX3CR1-201ENST00000358309 THOC1Q96FV9 657 aaKnown RBP6.73□□□□□ -1.33
CX3CR1-201ENST00000358309 MS4A4AQ96JQ5 239 aa6.73□□□□□ -1.33
CX3CR1-201ENST00000358309 MAP7D2Q96T17 732 aa6.73□□□□□ -1.33
CX3CR1-201ENST00000358309 PNKPQ96T60 521 aa6.73□□□□□ -1.33
CX3CR1-201ENST00000358309 RIT2Q99578 217 aa6.73□□□□□ -1.33
CX3CR1-201ENST00000358309 GPR20Q99678 358 aa6.73□□□□□ -1.33
CX3CR1-201ENST00000358309 TRIM51Q9BSJ1 452 aa6.73□□□□□ -1.33
CX3CR1-201ENST00000358309 B3GNT5Q9BYG0 378 aa6.73□□□□□ -1.33
CX3CR1-201ENST00000358309 PARD6BQ9BYG5 372 aa6.73□□□□□ -1.33
CX3CR1-201ENST00000358309 SMYD3Q9H7B4 428 aa6.73□□□□□ -1.33
CX3CR1-201ENST00000358309 CERS4Q9HA82 394 aa6.73□□□□□ -1.33
CX3CR1-201ENST00000358309 PRDM4Q9UKN5 801 aa6.73□□□□□ -1.33
CX3CR1-201ENST00000358309 PCDHA2Q9Y5H9 948 aa6.73□□□□□ -1.33
CX3CR1-201ENST00000358309 MCM3APO60318 1980 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 SYNGAP1Q96PV0 1343 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 SSC5DA1L4H1 1573 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 TCRBV7S2A1N4TA0A589 114 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 CTAGE15A4D2H0 777 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 DDX3XO00571 662 aaKnown RBP eCLIP6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 CTAGE8P0CG41 777 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 LCP1P13796 627 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 HPDP32754 393 aaPredicted RBP6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 GTF2A2P52657 109 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 LACTBP83111 547 aaPredicted RBP6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 SPOUT1Q5T280 376 aaKnown RBP6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 PDXDC1Q6P996 788 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 DCUN1D2Q6PH85 259 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 STXBP4Q6ZWJ1 553 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 TAS1R3Q7RTX0 852 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 CTAGE6Q86UF2 777 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 ZNF354CQ86Y25 554 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 TRIM59Q8IWR1 403 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 CTAGE4Q8IX94 777 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 C1orf131Q8NDD1 294 aaKnown RBP6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 MYRIPQ8NFW9 859 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 ZNF507Q8TCN5 953 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 SCFD2Q8WU76 684 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 TMPRSS4Q9NRS4 437 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 C1orf112Q9NSG2 853 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 AMACRQ9UHK6 382 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 MYO6Q9UM54 1294 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 PLAGL2Q9UPG8 496 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 NUB1Q9Y5A7 615 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 hCG_1984214I3L0E3 225 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 GTF2H1P32780 548 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 ATP1A2P50993 1020 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 ATXN1P54253 815 aaKnown RBP6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 LRRC63Q05C16 580 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 NEDD9Q14511 834 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 GRIK4Q16099 956 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 ATF7IP2Q5U623 682 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 METTL7BQ6UX53 244 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 NOP9Q86U38 636 aaKnown RBP6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 RIOX2Q8IUF8 465 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 ZBTB8OSQ8IWT0 167 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 ZNF713Q8N859 430 aaPredicted RBP6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 MTMR14Q8NCE2 650 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 LMBR1Q8WVP7 490 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 HSPH1Q92598 858 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 WNT8BQ93098 351 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 MAML3Q96JK9 1138 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 CAPNS2Q96L46 248 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 GAD1Q99259 594 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 PYM1Q9BRP8 204 aaKnown RBP6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 LRRC1Q9BTT6 524 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 POLR3CQ9BUI4 534 aaPredicted RBP6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 IMPG2Q9BZV3 1241 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 LRRC27Q9C0I9 530 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 TUBGCP4Q9UGJ1 667 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 DMGDHQ9UI17 866 aaKnown RBP6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 SIK3Q9Y2K2 1263 aa6.72□□□□□ -1.33
CX3CR1-201ENST00000358309 PTPRZ1P23471 2315 aaPredicted RBP6.71□□□□□ -1.33
CX3CR1-201ENST00000358309 SPATA31C2B4DYI2 1134 aa6.71□□□□□ -1.33
CX3CR1-201ENST00000358309 TACC1O75410 805 aa6.71□□□□□ -1.33
CX3CR1-201ENST00000358309 DGAT1O75907 488 aa6.71□□□□□ -1.33
CX3CR1-201ENST00000358309 HMBSP08397 361 aa6.71□□□□□ -1.33
CX3CR1-201ENST00000358309 MYBL2P10244 700 aa6.71□□□□□ -1.33
CX3CR1-201ENST00000358309 RRM1P23921 792 aa6.71□□□□□ -1.33
CX3CR1-201ENST00000358309 JAK3P52333 1124 aa6.71□□□□□ -1.33
CX3CR1-201ENST00000358309 VSNL1P62760 191 aa6.71□□□□□ -1.33
CX3CR1-201ENST00000358309 PPIL2Q13356 520 aa6.71□□□□□ -1.33
CX3CR1-201ENST00000358309 NCOA4Q13772 614 aa6.71□□□□□ -1.33
CX3CR1-201ENST00000358309 CELF3Q5SZQ8 465 aaKnown RBP6.71□□□□□ -1.33
CX3CR1-201ENST00000358309 SH3PXD2AQ5TCZ1 1133 aa6.71□□□□□ -1.33
CX3CR1-201ENST00000358309 FAXCQ5TGI0 409 aa6.71□□□□□ -1.33
CX3CR1-201ENST00000358309 TDRD10Q5VZ19 366 aaKnown RBP6.71□□□□□ -1.33
CX3CR1-201ENST00000358309 FAM160B1Q5W0V3 765 aa6.71□□□□□ -1.33
CX3CR1-201ENST00000358309 CHADLQ6NUI6 762 aa6.71□□□□□ -1.33
CX3CR1-201ENST00000358309 SND1Q7KZF4 910 aaKnown RBP eCLIP6.71□□□□□ -1.33
CX3CR1-201ENST00000358309 KREMEN1Q96MU8 473 aa6.71□□□□□ -1.33
CX3CR1-201ENST00000358309 NT5C1BQ96P26 610 aa6.71□□□□□ -1.33
CX3CR1-201ENST00000358309 DEFB118Q96PH6 123 aa6.71□□□□□ -1.33
CX3CR1-201ENST00000358309 PCDHB18PQ96TA0 734 aa6.71□□□□□ -1.33
CX3CR1-201ENST00000358309 TUFT1Q9NNX1 390 aa6.71□□□□□ -1.33
CX3CR1-201ENST00000358309 NGRNQ9NPE2 291 aaKnown RBP6.71□□□□□ -1.33
CX3CR1-201ENST00000358309 RBM12Q9NTZ6 932 aaKnown RBP6.71□□□□□ -1.33
CX3CR1-201ENST00000358309 IMPACTQ9P2X3 320 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms