RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A CLG1P35190 452 aa13.62□□□□□ -0.23
TRN1tP(UGG)A RAI1P53063 387 aaKnown RBP13.62□□□□□ -0.23
TRN1tP(UGG)A SLI1P53304 468 aa13.62□□□□□ -0.23
TRN1tP(UGG)A PEX30Q06169 523 aa13.62□□□□□ -0.23
TRN1tP(UGG)A MSH5Q12175 901 aa13.62□□□□□ -0.23
TRN1tP(UGG)A YBL113CQ7M4S9 792 aa13.62□□□□□ -0.23
TRN1tP(UGG)A SGA1P08019 549 aa13.61□□□□□ -0.23
TRN1tP(UGG)A YHL037CP38733 133 aa13.61□□□□□ -0.23
TRN1tP(UGG)A QDR1P40475 563 aa13.61□□□□□ -0.23
TRN1tP(UGG)A AVT7P40501 490 aa13.61□□□□□ -0.23
TRN1tP(UGG)A ACS1Q01574 713 aa13.61□□□□□ -0.23
TRN1tP(UGG)A HEM25Q07534 307 aa13.61□□□□□ -0.23
TRN1tP(UGG)A ATG41Q12048 136 aa13.61□□□□□ -0.23
TRN1tP(UGG)A RNH203Q12338 110 aa13.61□□□□□ -0.23
TRN1tP(UGG)A PHO4P07270 312 aaKnown RBP13.6□□□□□ -0.23
TRN1tP(UGG)A RCN1P36054 211 aa13.6□□□□□ -0.23
TRN1tP(UGG)A YHK8P38776 514 aa13.6□□□□□ -0.23
TRN1tP(UGG)A ERJ5P43613 295 aaPredicted RBP13.6□□□□□ -0.23
TRN1tP(UGG)A CIN2P46670 268 aa13.6□□□□□ -0.23
TRN1tP(UGG)A RSM28Q03430 361 aa13.6□□□□□ -0.23
TRN1tP(UGG)A GPI17Q04080 534 aa13.6□□□□□ -0.23
TRN1tP(UGG)A MRPL35Q06678 367 aa13.6□□□□□ -0.23
TRN1tP(UGG)A ORT1Q12375 292 aa13.6□□□□□ -0.23
TRN1tP(UGG)A ISA2Q12425 185 aa13.6□□□□□ -0.23
TRN1tP(UGG)A HOM6P31116 359 aaKnown RBP13.59□□□□□ -0.23
TRN1tP(UGG)A MBA1P38300 278 aa13.59□□□□□ -0.23
TRN1tP(UGG)A PIG2P40187 538 aa13.59□□□□□ -0.23
TRN1tP(UGG)A TDH3P00359 332 aaKnown RBP RIP-Chip data13.58□□□□□ -0.24not detected
TRN1tP(UGG)A MATALPHA1P0CY06 175 aa13.58□□□□□ -0.24
TRN1tP(UGG)A HMLALPHA1P0CY07 175 aa13.58□□□□□ -0.24
TRN1tP(UGG)A CNE1P27825 502 aa13.58□□□□□ -0.24
TRN1tP(UGG)A FCY21P40039 528 aa13.58□□□□□ -0.24
TRN1tP(UGG)A SER2P42941 309 aa13.58□□□□□ -0.24
TRN1tP(UGG)A MRH4P53166 561 aa13.58□□□□□ -0.24
TRN1tP(UGG)A POP6P53218 158 aa13.58□□□□□ -0.24
TRN1tP(UGG)A YNR048WP53740 393 aa13.58□□□□□ -0.24
TRN1tP(UGG)A MRL1Q06815 381 aa13.58□□□□□ -0.24
TRN1tP(UGG)A FRE3Q08905 711 aa13.58□□□□□ -0.24
TRN1tP(UGG)A TGS1Q12052 315 aa13.58□□□□□ -0.24
TRN1tP(UGG)A AFG1P32317 509 aa13.57□□□□□ -0.24
TRN1tP(UGG)A CLB6P32943 380 aa13.57□□□□□ -0.24
TRN1tP(UGG)A MIT1P40002 666 aa13.57□□□□□ -0.24
TRN1tP(UGG)A SNC2P33328 115 aa13.56□□□□□ -0.24
TRN1tP(UGG)A YGP1P38616 354 aaKnown RBP13.56□□□□□ -0.24
TRN1tP(UGG)A IPI1P38803 334 aaPredicted RBP13.56□□□□□ -0.24
TRN1tP(UGG)A YMR144WP40214 342 aaKnown RBP13.56□□□□□ -0.24
TRN1tP(UGG)A FLX1P40464 311 aa13.56□□□□□ -0.24
TRN1tP(UGG)A ERV29P53337 310 aa13.56□□□□□ -0.24
TRN1tP(UGG)A YPL077CQ02831 240 aa13.56□□□□□ -0.24
TRN1tP(UGG)A SPS100P13130 326 aa13.55□□□□□ -0.24
TRN1tP(UGG)A YBR220CP38318 560 aa13.55□□□□□ -0.24
TRN1tP(UGG)A MSS4P38994 779 aa13.55□□□□□ -0.24
TRN1tP(UGG)A YGL159WP53110 370 aa13.55□□□□□ -0.24
TRN1tP(UGG)A MTL1P53214 551 aa13.55□□□□□ -0.24
TRN1tP(UGG)A YDR391CQ04170 232 aa13.55□□□□□ -0.24
TRN1tP(UGG)A RSC58Q07979 502 aa13.55□□□□□ -0.24
TRN1tP(UGG)A PDA1P16387 420 aaKnown RBP13.54□□□□□ -0.24
TRN1tP(UGG)A PRE4P30657 266 aa13.54□□□□□ -0.24
TRN1tP(UGG)A PHB2P50085 310 aa13.54□□□□□ -0.24
TRN1tP(UGG)A UBC13P52490 153 aa13.54□□□□□ -0.24
TRN1tP(UGG)A SCW4P53334 386 aaKnown RBP13.54□□□□□ -0.24
TRN1tP(UGG)A RNH201P53942 307 aa13.54□□□□□ -0.24
TRN1tP(UGG)A HHT1P61830 136 aa13.54□□□□□ -0.24
TRN1tP(UGG)A RGC1Q06108 1083 aaKnown RBP13.54□□□□□ -0.24
TRN1tP(UGG)A FUR4P05316 633 aaKnown RBP13.53□□□□□ -0.24
TRN1tP(UGG)A RPL30P14120 105 aaKnown RBP13.53□□□□□ -0.24
TRN1tP(UGG)A ARO3P14843 370 aaKnown RBP13.53□□□□□ -0.24
TRN1tP(UGG)A DBF20P32328 564 aa13.53□□□□□ -0.24
TRN1tP(UGG)A BNA6P43619 295 aa13.53□□□□□ -0.24
TRN1tP(UGG)A YMR130WQ04223 302 aa13.53□□□□□ -0.24
TRN1tP(UGG)A YOR283WQ12040 230 aaKnown RBP13.53□□□□□ -0.24
TRN1tP(UGG)A GLC7P32598 312 aaKnown RBP13.52□□□□□ -0.25
TRN1tP(UGG)A MCH2P36032 473 aa13.52□□□□□ -0.25
TRN1tP(UGG)A HTD2P38790 280 aaKnown RBP13.52□□□□□ -0.25
TRN1tP(UGG)A IRC18P47056 224 aa13.52□□□□□ -0.25
TRN1tP(UGG)A IMD3P50095 523 aaKnown RBP13.52□□□□□ -0.25
TRN1tP(UGG)A AVT4P50944 713 aa13.52□□□□□ -0.25
TRN1tP(UGG)A CTF19Q02732 369 aa13.52□□□□□ -0.25
TRN1tP(UGG)A YLR283WQ05867 314 aa13.52□□□□□ -0.25
TRN1tP(UGG)A TPO3Q06451 622 aa13.52□□□□□ -0.25
TRN1tP(UGG)A USB1Q12208 290 aaKnown RBP13.52□□□□□ -0.25
TRN1tP(UGG)A NPL6P32832 435 aa13.51□□□□□ -0.25
TRN1tP(UGG)A PPZ2P33329 710 aa13.51□□□□□ -0.25
TRN1tP(UGG)A PRS3P38689 320 aaKnown RBP13.51□□□□□ -0.25
TRN1tP(UGG)A BUD8P41698 603 aa13.51□□□□□ -0.25
TRN1tP(UGG)A YIP5P53108 310 aa13.51□□□□□ -0.25
TRN1tP(UGG)A BUD25P85052 153 aa13.51□□□□□ -0.25
TRN1tP(UGG)A RRS1Q08746 203 aaKnown RBP13.51□□□□□ -0.25
TRN1tP(UGG)A NCE102Q12207 173 aaRIP-Chip data13.51□□□□□ -0.25not detected
TRN1tP(UGG)A HXT2P23585 541 aa13.5□□□□□ -0.25
TRN1tP(UGG)A DEG1P31115 442 aaKnown RBP13.5□□□□□ -0.25
TRN1tP(UGG)A MTR2P34232 184 aaKnown RBP13.5□□□□□ -0.25
TRN1tP(UGG)A TCM62P38228 572 aaKnown RBP13.5□□□□□ -0.25
TRN1tP(UGG)A SMB1P40018 196 aaKnown RBP13.5□□□□□ -0.25
TRN1tP(UGG)A VHT1P53241 593 aa13.5□□□□□ -0.25
TRN1tP(UGG)A CRZ1P53968 678 aa13.5□□□□□ -0.25
TRN1tP(UGG)A SRL2Q12020 392 aa13.5□□□□□ -0.25
TRN1tP(UGG)A INP53Q12271 1107 aa13.5□□□□□ -0.25
TRN1tP(UGG)A SPT14P32363 452 aa13.49□□□□□ -0.25
TRN1tP(UGG)A MTC7P32633 139 aa13.49□□□□□ -0.25
Retrieved 100 of 5,963 RNA–protein pairs in 224.9 ms