RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR78, Length 87 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR78snR78 SER33P40510 469 aa1.86□□□□□ -2.11
snR78snR78 RPL4BP49626 362 aaKnown RBP1.86□□□□□ -2.11
snR78snR78 PRO2P54885 456 aaKnown RBP1.86□□□□□ -2.11
snR78snR78 DAD3P69850 94 aa1.86□□□□□ -2.11
snR78snR78 PRM15Q03262 622 aa1.86□□□□□ -2.11
snR78snR78 ATC1Q04005 294 aa1.86□□□□□ -2.11
snR78snR78 VMA2P16140 517 aaKnown RBP1.85□□□□□ -2.11
snR78snR78 SLX9P53251 210 aaPredicted RBP1.85□□□□□ -2.11
snR78snR78 SFH1Q06168 426 aa1.85□□□□□ -2.11
snR78snR78 YOS9Q99220 542 aa1.85□□□□□ -2.11
snR78snR78 AI5_BETAQ9ZZX0 354 aa1.85□□□□□ -2.11
snR78snR78 CDC7P06243 507 aa1.84□□□□□ -2.11
snR78snR78 SGA1P08019 549 aa1.84□□□□□ -2.11
snR78snR78 MNN9P39107 395 aaKnown RBP1.84□□□□□ -2.11
snR78snR78 YHB1P39676 399 aaKnown RBP1.84□□□□□ -2.11
snR78snR78 EMI1Q04406 187 aa1.84□□□□□ -2.11
snR78snR78 POX1P13711 748 aa1.83□□□□□ -2.12
snR78snR78 TRM44Q02648 567 aaKnown RBP1.83□□□□□ -2.12
snR78snR78 FKS1P38631 1876 aaKnown RBP1.82□□□□□ -2.12
snR78snR78 YOL162WP0CF19 215 aa1.82□□□□□ -2.12
snR78snR78 OST2P46964 130 aa1.82□□□□□ -2.12
snR78snR78 PER33Q12144 273 aa1.82□□□□□ -2.12
snR78snR78 CWP1P28319 239 aa1.81□□□□□ -2.12
snR78snR78 ECM13P38195 257 aa1.81□□□□□ -2.12
snR78snR78 RSM10Q03201 203 aa1.81□□□□□ -2.12
snR78snR78 INM2Q05533 292 aa1.81□□□□□ -2.12
snR78snR78 RAS2P01120 322 aaKnown RBP1.8□□□□□ -2.12
snR78snR78 YHL049CP38722 271 aa1.8□□□□□ -2.12
snR78snR78 VPS45P38932 577 aa1.8□□□□□ -2.12
snR78snR78 PRM9P39551 298 aa1.8□□□□□ -2.12
snR78snR78 TIM21P53220 239 aa1.8□□□□□ -2.12
snR78snR78 AAH1P53909 347 aa1.8□□□□□ -2.12
snR78snR78 VBA1Q04301 562 aa1.8□□□□□ -2.12
snR78snR78 FBA1P14540 359 aaKnown RBP1.78□□□□□ -2.12
snR78snR78 HEK2P38199 381 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
snR78snR78 OSW5P40219 148 aa1.78□□□□□ -2.12
snR78snR78 YNL050CP53952 270 aa1.78□□□□□ -2.12
snR78snR78 ASI3P53983 676 aa1.78□□□□□ -2.12
snR78snR78 BCP1Q06338 283 aa1.78□□□□□ -2.12
snR78snR78 YER135CP40082 130 aa1.77□□□□□ -2.13
snR78snR78 NBP35P52920 328 aa1.77□□□□□ -2.13
snR78snR78 YKR045CP36138 183 aa1.76□□□□□ -2.13
snR78snR78 LOC1P43586 204 aaPredicted RBP1.76□□□□□ -2.13
snR78snR78 RPC40P07703 335 aaKnown RBP1.75□□□□□ -2.13
snR78snR78 SCL1P21243 252 aaKnown RBP1.75□□□□□ -2.13
snR78snR78 RCN1P36054 211 aa1.75□□□□□ -2.13
snR78snR78 CIS3P47001 227 aa1.75□□□□□ -2.13
snR78snR78 SWS2P53937 143 aa1.75□□□□□ -2.13
snR78snR78 RPP0P05317 312 aaKnown RBP1.74□□□□□ -2.13
snR78snR78 UGA1P17649 471 aa1.74□□□□□ -2.13
snR78snR78 POF1P25576 258 aa1.74□□□□□ -2.13
snR78snR78 PEX4P29340 183 aa1.74□□□□□ -2.13
snR78snR78 SHC1P39000 512 aa1.74□□□□□ -2.13
snR78snR78 YNL260CP53846 198 aa1.74□□□□□ -2.13
snR78snR78 CDC14Q00684 551 aa1.74□□□□□ -2.13
snR78snR78 PEX10Q05568 337 aa1.74□□□□□ -2.13
snR78snR78 SPO19Q03029 223 aa1.73□□□□□ -2.13
snR78snR78 YPR011CQ12251 326 aa1.73□□□□□ -2.13
snR78snR78 YHR032W-AP0C5N6 59 aa1.72□□□□□ -2.13
snR78snR78 FRS2P15625 503 aaKnown RBP1.72□□□□□ -2.13
snR78snR78 TPM1P17536 199 aaKnown RBP1.72□□□□□ -2.13
snR78snR78 YSR3P23501 404 aa1.72□□□□□ -2.13
snR78snR78 ATO3Q12359 275 aa1.72□□□□□ -2.13
snR78snR78 DCN1Q12395 269 aa1.72□□□□□ -2.13
snR78snR78 VTC1P40046 129 aaRIP-Chip data1.71□□□□□ -2.14not detected
snR78snR78 BMT5P40493 336 aa1.71□□□□□ -2.14
snR78snR78 MRPS8Q03799 155 aa1.71□□□□□ -2.14
snR78snR78 PRS4P38063 326 aaPredicted RBP1.7□□□□□ -2.14
snR78snR78 COS8P38723 381 aa1.7□□□□□ -2.14
snR78snR78 DOG1P38774 246 aa1.7□□□□□ -2.14
snR78snR78 DSE2P38844 325 aa1.7□□□□□ -2.14
snR78snR78 ARC15P40518 154 aaRIP-Chip data1.7□□□□□ -2.14not detected
snR78snR78 SMD3P43321 101 aaKnown RBP1.7□□□□□ -2.14
snR78snR78 PNC1P53184 216 aaKnown RBP1.7□□□□□ -2.14
snR78snR78 MNT4P53745 580 aa1.7□□□□□ -2.14
snR78snR78 ARV1Q06541 321 aa1.7□□□□□ -2.14
snR78snR78 REX3Q12090 404 aa1.7□□□□□ -2.14
snR78snR78 BBP1Q12365 385 aa1.7□□□□□ -2.14
snR78snR78 YBL008W-AQ3E821 79 aa1.7□□□□□ -2.14
snR78snR78 MDH2P22133 377 aa1.69□□□□□ -2.14
snR78snR78 RCY1P39531 840 aa1.69□□□□□ -2.14
snR78snR78 PRM10P42946 383 aa1.69□□□□□ -2.14
snR78snR78 ERG25P53045 309 aa1.69□□□□□ -2.14
snR78snR78 ARP5P53946 755 aa1.69□□□□□ -2.14
snR78snR78 NUP49Q02199 472 aa1.69□□□□□ -2.14
snR78snR78 EMP46Q12396 444 aa1.69□□□□□ -2.14
snR78snR78 UBR2Q07963 1872 aa1.69□□□□□ -2.14
snR78snR78 STF1P01098 86 aa1.68□□□□□ -2.14
snR78snR78 Q0255P03881 472 aa1.68□□□□□ -2.14
snR78snR78 SEC22P22214 214 aa1.68□□□□□ -2.14
snR78snR78 HSM3P38348 480 aa1.68□□□□□ -2.14
snR78snR78 CTR3Q06686 241 aa1.68□□□□□ -2.14
snR78snR78 MDY2Q12285 212 aa1.68□□□□□ -2.14
snR78snR78 DSF1P0CX08 502 aa1.67□□□□□ -2.14
snR78snR78 YNR073CP0CX09 502 aa1.67□□□□□ -2.14
snR78snR78 SSH1P38353 490 aaKnown RBP1.67□□□□□ -2.14
snR78snR78 CYT2Q00873 224 aa1.67□□□□□ -2.14
snR78snR78 CTF19Q02732 369 aa1.67□□□□□ -2.14
snR78snR78 ERV41Q04651 352 aa1.67□□□□□ -2.14
snR78snR78 STH1P32597 1359 aa1.67□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 65 ms