RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 FLO9P39712 1322 aa-0.2□□□□□ -2.44
snR56snR56 RNR2P09938 399 aaKnown RBP-0.21□□□□□ -2.44
snR56snR56 NPT1P39683 429 aaKnown RBP-0.21□□□□□ -2.44
snR56snR56 SML1Q04964 104 aa-0.21□□□□□ -2.44
snR56snR56 DBP9Q06218 594 aaKnown RBP-0.21□□□□□ -2.44
snR56snR56 NSP1P14907 823 aaKnown RBP-0.22□□□□□ -2.44
snR56snR56 UIP5P36137 443 aa-0.22□□□□□ -2.44
snR56snR56 YKE4P40544 346 aa-0.22□□□□□ -2.44
snR56snR56 DBP6P53734 629 aaKnown RBP-0.22□□□□□ -2.44
snR56snR56 SWE1P32944 819 aa-0.23□□□□□ -2.45
snR56snR56 RPC37P36121 282 aa-0.23□□□□□ -2.45
snR56snR56 LIN1P38852 340 aaPredicted RBP-0.23□□□□□ -2.45
snR56snR56 ICE2P40499 491 aa-0.23□□□□□ -2.45
snR56snR56 ERV29P53337 310 aa-0.23□□□□□ -2.45
snR56snR56 EOS1P53938 366 aa-0.23□□□□□ -2.45
snR56snR56 TAL1P15019 335 aaKnown RBP-0.24□□□□□ -2.45
snR56snR56 YKL063CP35725 167 aa-0.24□□□□□ -2.45
snR56snR56 ERV15P38312 142 aa-0.24□□□□□ -2.45
snR56snR56 CTR2P38865 189 aa-0.24□□□□□ -2.45
snR56snR56 UBC7Q02159 165 aa-0.24□□□□□ -2.45
snR56snR56 YMR007WQ03675 126 aa-0.24□□□□□ -2.45
snR56snR56 YPL119C-AQ3E751 87 aa-0.24□□□□□ -2.45
snR56snR56 Q0255P03881 472 aa-0.25□□□□□ -2.45
snR56snR56 OAC1P32332 324 aa-0.25□□□□□ -2.45
snR56snR56 YGR219WP53307 113 aa-0.25□□□□□ -2.45
snR56snR56 ATC1Q04005 294 aa-0.25□□□□□ -2.45
snR56snR56 SLD7Q08457 257 aa-0.25□□□□□ -2.45
snR56snR56 AKR2Q12013 749 aa-0.25□□□□□ -2.45
snR56snR56 USB1Q12208 290 aaKnown RBP-0.25□□□□□ -2.45
snR56snR56 FRE6Q12473 712 aa-0.25□□□□□ -2.45
snR56snR56 ARC15P40518 154 aaRIP-Chip data-0.26□□□□□ -2.45not detected
snR56snR56 AGE2P40529 298 aa-0.26□□□□□ -2.45
snR56snR56 IBA57P47158 497 aa-0.26□□□□□ -2.45
snR56snR56 CUE3P53137 624 aaKnown RBP-0.26□□□□□ -2.45
snR56snR56 QCR8P08525 94 aa-0.27□□□□□ -2.45
snR56snR56 UGA1P17649 471 aa-0.27□□□□□ -2.45
snR56snR56 SWD2P36104 329 aaPredicted RBP-0.27□□□□□ -2.45
snR56snR56 YEL067CP39978 195 aa-0.27□□□□□ -2.45
snR56snR56 YPL077CQ02831 240 aa-0.27□□□□□ -2.45
snR56snR56 GAL3P13045 520 aa-0.28□□□□□ -2.45
snR56snR56 RCN1P36054 211 aa-0.28□□□□□ -2.45
snR56snR56 YAL064W-BO13512 126 aa-0.29□□□□□ -2.46
snR56snR56 FET3P38993 636 aa-0.29□□□□□ -2.46
snR56snR56 SLH1P53327 1967 aaKnown RBP-0.29□□□□□ -2.46
snR56snR56 CWP1P28319 239 aa-0.3□□□□□ -2.46
snR56snR56 PRS4P38063 326 aaPredicted RBP-0.3□□□□□ -2.46
snR56snR56 SVP26P38869 228 aa-0.3□□□□□ -2.46
snR56snR56 YGR026WP53217 278 aa-0.3□□□□□ -2.46
snR56snR56 CTF19Q02732 369 aa-0.3□□□□□ -2.46
snR56snR56 AQY2P0CD90 149 aa-0.31□□□□□ -2.46
snR56snR56 MSS116P15424 664 aaKnown RBP-0.31□□□□□ -2.46
snR56snR56 YER076CP40049 302 aa-0.31□□□□□ -2.46
snR56snR56 JEM1P40358 645 aa-0.31□□□□□ -2.46
snR56snR56 YMR111CQ04461 462 aaPredicted RBP-0.31□□□□□ -2.46
snR56snR56 ASR1Q06834 288 aa-0.31□□□□□ -2.46
snR56snR56 PAA1Q12447 191 aaKnown RBP-0.31□□□□□ -2.46
snR56snR56 SWC5P38326 303 aa-0.32□□□□□ -2.46
snR56snR56 SER33P40510 469 aa-0.32□□□□□ -2.46
snR56snR56 COX16P47081 118 aa-0.32□□□□□ -2.46
snR56snR56 GTO1P48239 356 aa-0.32□□□□□ -2.46
snR56snR56 VPS20Q04272 221 aa-0.32□□□□□ -2.46
snR56snR56 EMP46Q12396 444 aa-0.32□□□□□ -2.46
snR56snR56 AI5_BETAQ9ZZX0 354 aa-0.32□□□□□ -2.46
snR56snR56 COS8P38723 381 aa-0.33□□□□□ -2.46
snR56snR56 YHR125WP38831 101 aa-0.33□□□□□ -2.46
snR56snR56 MAL13P53338 473 aa-0.33□□□□□ -2.46
snR56snR56 YMR279CQ03263 540 aa-0.33□□□□□ -2.46
snR56snR56 ATP6P00854 259 aa-0.34□□□□□ -2.46
snR56snR56 RPC40P07703 335 aaKnown RBP-0.34□□□□□ -2.46
snR56snR56 PEX3P28795 441 aa-0.34□□□□□ -2.46
snR56snR56 PRM9P39551 298 aa-0.34□□□□□ -2.46
snR56snR56 YIA6P40556 373 aa-0.34□□□□□ -2.46
snR56snR56 SLX9P53251 210 aaPredicted RBP-0.34□□□□□ -2.46
snR56snR56 COX5AP00424 153 aa-0.35□□□□□ -2.47
snR56snR56 SSH1P38353 490 aaKnown RBP-0.35□□□□□ -2.47
snR56snR56 YHL049CP38722 271 aa-0.35□□□□□ -2.47
snR56snR56 ARP5P53946 755 aa-0.35□□□□□ -2.47
snR56snR56 YNL050CP53952 270 aa-0.35□□□□□ -2.47
snR56snR56 SEC10Q06245 871 aa-0.35□□□□□ -2.47
snR56snR56 PML1Q07930 204 aaPredicted RBP-0.35□□□□□ -2.47
snR56snR56 BBP1Q12365 385 aa-0.35□□□□□ -2.47
snR56snR56 RPL4AP10664 362 aaKnown RBP-0.36□□□□□ -2.47
snR56snR56 EBP2P36049 427 aaKnown RBP-0.36□□□□□ -2.47
snR56snR56 LAS1P36146 502 aaPredicted RBP-0.36□□□□□ -2.47
snR56snR56 PEX18P38855 283 aa-0.36□□□□□ -2.47
snR56snR56 YIL001WP40560 513 aa-0.36□□□□□ -2.47
snR56snR56 RPL4BP49626 362 aaKnown RBP-0.36□□□□□ -2.47
snR56snR56 NEJ1Q06148 342 aa-0.36□□□□□ -2.47
snR56snR56 NFI1Q12216 726 aa-0.36□□□□□ -2.47
snR56snR56 SEC22P22214 214 aa-0.37□□□□□ -2.47
snR56snR56 YPL162CQ12042 273 aa-0.37□□□□□ -2.47
snR56snR56 POM33Q12164 279 aa-0.37□□□□□ -2.47
snR56snR56 SIA1Q12212 622 aa-0.37□□□□□ -2.47
snR56snR56 YPR011CQ12251 326 aa-0.37□□□□□ -2.47
snR56snR56 POT1P27796 417 aaKnown RBP RIP-Chip data-0.38□□□□□ -2.47not detected
snR56snR56 PEX31P53203 462 aa-0.38□□□□□ -2.47
snR56snR56 PDR16P53860 351 aaKnown RBP-0.38□□□□□ -2.47
snR56snR56 YOS9Q99220 542 aa-0.38□□□□□ -2.47
snR56snR56 PET9P18239 318 aaKnown RBP-0.39□□□□□ -2.47
snR56snR56 RPL5P26321 297 aaKnown RBP-0.39□□□□□ -2.47
Retrieved 100 of 5,963 RNA–protein pairs in 61 ms