RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 MAL12P53341 584 aa-0.66□□□□□ -2.52
snR50snR50 ARP5P53946 755 aa-0.66□□□□□ -2.52
snR50snR50 SPP2Q02521 185 aa-0.66□□□□□ -2.52
snR50snR50 YML018CQ03730 393 aa-0.66□□□□□ -2.52
snR50snR50 SNX41Q04053 625 aa-0.66□□□□□ -2.52
snR50snR50 BOP2Q06150 570 aa-0.66□□□□□ -2.52
snR50snR50 UTP23Q12339 254 aaKnown RBP-0.66□□□□□ -2.52
snR50snR50 COX5AP00424 153 aa-0.67□□□□□ -2.52
snR50snR50 THR4P16120 514 aaKnown RBP-0.67□□□□□ -2.52
snR50snR50 TRX2P22803 104 aaKnown RBP-0.67□□□□□ -2.52
snR50snR50 HMX1P32339 317 aa-0.67□□□□□ -2.52
snR50snR50 YHR125WP38831 101 aa-0.67□□□□□ -2.52
snR50snR50 YIL102CP40488 101 aa-0.67□□□□□ -2.52
snR50snR50 TIR3P40552 269 aa-0.67□□□□□ -2.52
snR50snR50 GPD2P41911 440 aaKnown RBP-0.67□□□□□ -2.52
snR50snR50 YJR111CP47148 283 aaKnown RBP-0.67□□□□□ -2.52
snR50snR50 ARR2Q06597 130 aa-0.67□□□□□ -2.52
snR50snR50 RRS1Q08746 203 aaKnown RBP-0.67□□□□□ -2.52
snR50snR50 SPE3Q12074 293 aaKnown RBP-0.67□□□□□ -2.52
snR50snR50 MSW1P04803 379 aa-0.68□□□□□ -2.52
snR50snR50 PDX1P16451 410 aa-0.68□□□□□ -2.52
snR50snR50 TFC1P32367 649 aa-0.68□□□□□ -2.52
snR50snR50 RCN1P36054 211 aa-0.68□□□□□ -2.52
snR50snR50 PRS4P38063 326 aaPredicted RBP-0.68□□□□□ -2.52
snR50snR50 RRF1P38771 230 aa-0.68□□□□□ -2.52
snR50snR50 FET3P38993 636 aa-0.68□□□□□ -2.52
snR50snR50 GAA1P39012 614 aa-0.68□□□□□ -2.52
snR50snR50 NPT1P39683 429 aaKnown RBP-0.68□□□□□ -2.52
snR50snR50 BTT1P40314 149 aaPredicted RBP-0.68□□□□□ -2.52
snR50snR50 GLG2P47011 380 aa-0.68□□□□□ -2.52
snR50snR50 AIF1P52923 378 aa-0.68□□□□□ -2.52
snR50snR50 SWC4P53201 476 aa-0.68□□□□□ -2.52
snR50snR50 YNR068CP53754 272 aa-0.68□□□□□ -2.52
snR50snR50 SDC1Q03323 175 aa-0.68□□□□□ -2.52
snR50snR50 ADH6Q04894 360 aaKnown RBP-0.68□□□□□ -2.52
snR50snR50 YFH1Q07540 174 aa-0.68□□□□□ -2.52
snR50snR50 TPO4Q12256 659 aa-0.68□□□□□ -2.52
snR50snR50 EMP46Q12396 444 aa-0.68□□□□□ -2.52
snR50snR50 RGS2Q99188 309 aa-0.68□□□□□ -2.52
snR50snR50 GAL3P13045 520 aa-0.69□□□□□ -2.52
snR50snR50 CIN8P27895 1000 aa-0.69□□□□□ -2.52
snR50snR50 MEI4P29467 408 aa-0.69□□□□□ -2.52
snR50snR50 CAM1P29547 415 aaKnown RBP-0.69□□□□□ -2.52
snR50snR50 VMA5P31412 392 aaKnown RBP-0.69□□□□□ -2.52
snR50snR50 SUA5P32579 426 aa-0.69□□□□□ -2.52
snR50snR50 RXT2P38255 430 aa-0.69□□□□□ -2.52
snR50snR50 YNL217WP40152 326 aa-0.69□□□□□ -2.52
snR50snR50 RPL33BP41056 107 aaKnown RBP-0.69□□□□□ -2.52
snR50snR50 BOL2P53082 120 aa-0.69□□□□□ -2.52
snR50snR50 SAY1P53324 424 aa-0.69□□□□□ -2.52
snR50snR50 POP3P53833 195 aaPredicted RBP-0.69□□□□□ -2.52
snR50snR50 FMP41P53889 259 aaKnown RBP-0.69□□□□□ -2.52
snR50snR50 RVB1Q03940 463 aaKnown RBP-0.69□□□□□ -2.52
snR50snR50 CCW12Q12127 133 aa-0.69□□□□□ -2.52
snR50snR50 CDC36P06100 191 aaPredicted RBP-0.7□□□□□ -2.52
snR50snR50 RPC40P07703 335 aaKnown RBP-0.7□□□□□ -2.52
snR50snR50 RPL1AP0CX43 217 aaKnown RBP-0.7□□□□□ -2.52
snR50snR50 RPL1BP0CX44 217 aaKnown RBP-0.7□□□□□ -2.52
snR50snR50 MSS116P15424 664 aaKnown RBP-0.7□□□□□ -2.52
snR50snR50 GRX2P17695 143 aaKnown RBP-0.7□□□□□ -2.52
snR50snR50 CWP1P28319 239 aa-0.7□□□□□ -2.52
snR50snR50 PEX3P28795 441 aa-0.7□□□□□ -2.52
snR50snR50 VMA11P32842 164 aa-0.7□□□□□ -2.52
snR50snR50 MEP1P40260 492 aa-0.7□□□□□ -2.52
snR50snR50 PGD1P40356 397 aa-0.7□□□□□ -2.52
snR50snR50 ZIM17P42844 174 aa-0.7□□□□□ -2.52
snR50snR50 BUD27P43573 796 aaKnown RBP RIP-Chip data-0.7□□□□□ -2.52not detected
snR50snR50 ERJ5P43613 295 aaPredicted RBP-0.7□□□□□ -2.52
snR50snR50 MNT4P53745 580 aa-0.7□□□□□ -2.52
snR50snR50 YNL050CP53952 270 aa-0.7□□□□□ -2.52
snR50snR50 VBA1Q04301 562 aa-0.7□□□□□ -2.52
snR50snR50 EMI1Q04406 187 aa-0.7□□□□□ -2.52
snR50snR50 YMR310CQ04867 317 aaPredicted RBP-0.7□□□□□ -2.52
snR50snR50 YLR287CQ05881 355 aa-0.7□□□□□ -2.52
snR50snR50 HEM25Q07534 307 aa-0.7□□□□□ -2.52
snR50snR50 SLD7Q08457 257 aa-0.7□□□□□ -2.52
snR50snR50 BUD21Q08492 214 aaPredicted RBP-0.7□□□□□ -2.52
snR50snR50 SMC6Q12749 1114 aa-0.7□□□□□ -2.52
snR50snR50 SIR4P11978 1358 aa-0.7□□□□□ -2.52
snR50snR50 YMR316C-AI2HB70 103 aa-0.71□□□□□ -2.52
snR50snR50 PTC1P35182 281 aa-0.71□□□□□ -2.52
snR50snR50 YHL049CP38722 271 aa-0.71□□□□□ -2.52
snR50snR50 VPS60Q03390 229 aa-0.71□□□□□ -2.52
snR50snR50 ATC1Q04005 294 aa-0.71□□□□□ -2.52
snR50snR50 TAF9Q05027 157 aa-0.71□□□□□ -2.52
snR50snR50 DPP1Q05521 289 aa-0.71□□□□□ -2.52
snR50snR50 LOA1Q06508 300 aa-0.71□□□□□ -2.52
snR50snR50 YOR114WQ12219 294 aa-0.71□□□□□ -2.52
snR50snR50 RRP42Q12277 265 aaPredicted RBP-0.71□□□□□ -2.52
snR50snR50 YPR064WQ12492 139 aa-0.71□□□□□ -2.52
snR50snR50 IZH4Q99393 312 aa-0.71□□□□□ -2.52
snR50snR50 AI5_BETAQ9ZZX0 354 aa-0.71□□□□□ -2.52
snR50snR50 PET494P07390 489 aaPredicted RBP-0.72□□□□□ -2.52
snR50snR50 SSA3P09435 649 aaKnown RBP-0.72□□□□□ -2.52
snR50snR50 RPL27BP0C2H7 136 aaKnown RBP-0.72□□□□□ -2.52
snR50snR50 DAL82P21705 255 aa-0.72□□□□□ -2.52
snR50snR50 MRPL15P36523 253 aa-0.72□□□□□ -2.52
snR50snR50 PRM9P39551 298 aa-0.72□□□□□ -2.52
snR50snR50 INA22P40576 216 aa-0.72□□□□□ -2.52
snR50snR50 GCN20P43535 752 aaKnown RBP-0.72□□□□□ -2.52
Retrieved 100 of 5,963 RNA–protein pairs in 68.6 ms