RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C VPS51P36116 164 aa5.41□□□□□ -1.54
VPS4YPR173C MRPL27P36526 146 aaPredicted RBP5.41□□□□□ -1.54
VPS4YPR173C ATG8P38182 117 aaRIP-Chip data5.41□□□□□ -1.54not detected
VPS4YPR173C QRI1P43123 477 aaKnown RBP5.41□□□□□ -1.54
VPS4YPR173C OTU1P43558 301 aa5.41□□□□□ -1.54
VPS4YPR173C CCC1P47818 322 aa5.41□□□□□ -1.54
VPS4YPR173C YGL117WP53133 265 aa5.41□□□□□ -1.54
VPS4YPR173C PNC1P53184 216 aaKnown RBP5.41□□□□□ -1.54
VPS4YPR173C ERG26P53199 349 aaKnown RBP5.41□□□□□ -1.54
VPS4YPR173C PEF1P53238 335 aa5.41□□□□□ -1.54
VPS4YPR173C TMN2Q04562 672 aa5.41□□□□□ -1.54
VPS4YPR173C YPR172WQ06608 200 aa5.41□□□□□ -1.54
VPS4YPR173C BER1Q06688 274 aaKnown RBP5.41□□□□□ -1.54
VPS4YPR173C GUP2Q08929 609 aa5.41□□□□□ -1.54
VPS4YPR173C YOR114WQ12219 294 aa5.41□□□□□ -1.54
VPS4YPR173C MDM35O60200 86 aa5.4□□□□□ -1.55
VPS4YPR173C IFM1P25038 676 aa5.4□□□□□ -1.55
VPS4YPR173C TIP1P27654 210 aaPredicted RBP5.4□□□□□ -1.55
VPS4YPR173C PPZ2P33329 710 aa5.4□□□□□ -1.55
VPS4YPR173C OAR1P35731 278 aa5.4□□□□□ -1.55
VPS4YPR173C SHG1P38337 142 aa5.4□□□□□ -1.55
VPS4YPR173C TRR2P38816 342 aa5.4□□□□□ -1.55
VPS4YPR173C PZF1P39933 429 aa5.4□□□□□ -1.55
VPS4YPR173C TOK1P40310 691 aa5.4□□□□□ -1.55
VPS4YPR173C AVT7P40501 490 aa5.4□□□□□ -1.55
VPS4YPR173C LYS20P48570 428 aaKnown RBP5.4□□□□□ -1.55
VPS4YPR173C HSV2P50079 448 aaPredicted RBP5.4□□□□□ -1.55
VPS4YPR173C ARL3Q02804 198 aa5.4□□□□□ -1.55
VPS4YPR173C PEX25Q02969 394 aa5.4□□□□□ -1.55
VPS4YPR173C NNT1Q05874 261 aa5.4□□□□□ -1.55
VPS4YPR173C BRX1Q08235 291 aaKnown RBP5.4□□□□□ -1.55
VPS4YPR173C YOR365CQ08844 703 aa5.4□□□□□ -1.55
VPS4YPR173C SCP1Q08873 200 aa5.4□□□□□ -1.55
VPS4YPR173C MED4Q12343 284 aa5.4□□□□□ -1.55
VPS4YPR173C YPR145C-AQ2V2P0 78 aa5.4□□□□□ -1.55
VPS4YPR173C INH1P01097 85 aa5.39□□□□□ -1.55
VPS4YPR173C FRS1P15624 595 aaKnown RBP5.39□□□□□ -1.55
VPS4YPR173C URA6P15700 204 aa5.39□□□□□ -1.55
VPS4YPR173C YPK2P18961 677 aa5.39□□□□□ -1.55
VPS4YPR173C REC104P33323 182 aa5.39□□□□□ -1.55
VPS4YPR173C PAN3P36102 679 aaPredicted RBP5.39□□□□□ -1.55
VPS4YPR173C CHK1P38147 527 aa5.39□□□□□ -1.55
VPS4YPR173C TRM7P38238 310 aaKnown RBP5.39□□□□□ -1.55
VPS4YPR173C YER158CP40095 573 aa5.39□□□□□ -1.55
VPS4YPR173C GNA1P43577 159 aaPredicted RBP5.39□□□□□ -1.55
VPS4YPR173C CIN2P46670 268 aa5.39□□□□□ -1.55
VPS4YPR173C YJL016WP47072 561 aa5.39□□□□□ -1.55
VPS4YPR173C GPI14P47088 403 aaKnown RBP5.39□□□□□ -1.55
VPS4YPR173C SOL1P50278 321 aa5.39□□□□□ -1.55
VPS4YPR173C AAH1P53909 347 aa5.39□□□□□ -1.55
VPS4YPR173C CTF19Q02732 369 aa5.39□□□□□ -1.55
VPS4YPR173C FIT1Q04433 528 aa5.39□□□□□ -1.55
VPS4YPR173C ATG10Q07879 167 aa5.39□□□□□ -1.55
VPS4YPR173C FCF2Q12035 217 aaPredicted RBP5.39□□□□□ -1.55
VPS4YPR173C ODC2Q99297 307 aa5.39□□□□□ -1.55
VPS4YPR173C YML003WP0CF16 290 aa5.38□□□□□ -1.55
VPS4YPR173C MATALPHA1P0CY06 175 aa5.38□□□□□ -1.55
VPS4YPR173C HMLALPHA1P0CY07 175 aa5.38□□□□□ -1.55
VPS4YPR173C GLK1P17709 500 aaKnown RBP5.38□□□□□ -1.55
VPS4YPR173C BUB3P26449 341 aa5.38□□□□□ -1.55
VPS4YPR173C TRR1P29509 319 aaKnown RBP5.38□□□□□ -1.55
VPS4YPR173C DBF20P32328 564 aa5.38□□□□□ -1.55
VPS4YPR173C TIM12P32830 109 aa5.38□□□□□ -1.55
VPS4YPR173C MDL1P33310 695 aa5.38□□□□□ -1.55
VPS4YPR173C AVT5P38176 459 aa5.38□□□□□ -1.55
VPS4YPR173C PRP39P39682 629 aaKnown RBP5.38□□□□□ -1.55
VPS4YPR173C YIR035CP40579 254 aa5.38□□□□□ -1.55
VPS4YPR173C NIF3P53081 288 aa5.38□□□□□ -1.55
VPS4YPR173C TIM21P53220 239 aa5.38□□□□□ -1.55
VPS4YPR173C VPS62P53285 467 aa5.38□□□□□ -1.55
VPS4YPR173C YGR250CP53316 781 aaKnown RBP5.38□□□□□ -1.55
VPS4YPR173C MTM1P53320 366 aa5.38□□□□□ -1.55
VPS4YPR173C YNR062CP53748 327 aa5.38□□□□□ -1.55
VPS4YPR173C APJ1P53940 528 aa5.38□□□□□ -1.55
VPS4YPR173C ACT1P60010 375 aaKnown RBP5.38□□□□□ -1.55
VPS4YPR173C BUD25P85052 153 aa5.38□□□□□ -1.55
VPS4YPR173C YPL108WQ02872 168 aaPredicted RBP5.38□□□□□ -1.55
VPS4YPR173C EST3Q03096 181 aa5.38□□□□□ -1.55
VPS4YPR173C RPC11Q04307 110 aaPredicted RBP5.38□□□□□ -1.55
VPS4YPR173C RTK1Q12100 620 aaPredicted RBP5.38□□□□□ -1.55
VPS4YPR173C YLR111WQ12528 110 aa5.38□□□□□ -1.55
VPS4YPR173C ADH3P07246 375 aaKnown RBP5.37□□□□□ -1.55
VPS4YPR173C HNM1P19807 563 aa5.37□□□□□ -1.55
VPS4YPR173C RNQ1P25367 405 aa5.37□□□□□ -1.55
VPS4YPR173C PRE2P30656 287 aaKnown RBP5.37□□□□□ -1.55
VPS4YPR173C SUI1P32911 108 aaKnown RBP5.37□□□□□ -1.55
VPS4YPR173C PRS2P38620 318 aaKnown RBP5.37□□□□□ -1.55
VPS4YPR173C RPP1P38786 293 aa5.37□□□□□ -1.55
VPS4YPR173C GPI16P38875 610 aa5.37□□□□□ -1.55
VPS4YPR173C SPC25P40014 221 aa5.37□□□□□ -1.55
VPS4YPR173C YIL077CP40508 320 aa5.37□□□□□ -1.55
VPS4YPR173C FAF1P40546 346 aaPredicted RBP5.37□□□□□ -1.55
VPS4YPR173C SMK1P41808 388 aa5.37□□□□□ -1.55
VPS4YPR173C HXT14P42833 540 aa5.37□□□□□ -1.55
VPS4YPR173C AGX1P43567 385 aa5.37□□□□□ -1.55
VPS4YPR173C DUG1P43616 481 aaKnown RBP5.37□□□□□ -1.55
VPS4YPR173C ADO1P47143 340 aaKnown RBP5.37□□□□□ -1.55
VPS4YPR173C DAN1P47178 298 aa5.37□□□□□ -1.55
VPS4YPR173C PUS4P48567 403 aaKnown RBP5.37□□□□□ -1.55
VPS4YPR173C OGG1P53397 376 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 64.7 ms