RNA–Protein interactions for RNA: YPR103W

PRE2, Transcript of Beta 5 subunit of the 20S proteasome, yeastyeast

Gene PRE2, Length 864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE2YPR103W RPS23AP0CX29 145 aaKnown RBP3.89□□□□□ -1.79
PRE2YPR103W RPS23BP0CX30 145 aa3.89□□□□□ -1.79
PRE2YPR103W POP8P38208 133 aa3.89□□□□□ -1.79
PRE2YPR103W SEC10Q06245 871 aa3.89□□□□□ -1.79
PRE2YPR103W DXO1Q06349 442 aa3.89□□□□□ -1.79
PRE2YPR103W IES3Q12345 250 aa3.89□□□□□ -1.79
PRE2YPR103W COG7P53195 279 aa3.88□□□□□ -1.79
PRE2YPR103W SWS2P53937 143 aa3.88□□□□□ -1.79
PRE2YPR103W OST6Q03723 332 aa3.88□□□□□ -1.79
PRE2YPR103W PDR10P51533 1564 aa3.88□□□□□ -1.79
PRE2YPR103W STU1P38198 1513 aa3.87□□□□□ -1.79
PRE2YPR103W YAL064W-BO13512 126 aa3.87□□□□□ -1.79
PRE2YPR103W YUH1P35127 236 aa3.87□□□□□ -1.79
PRE2YPR103W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
PRE2YPR103W NBP35P52920 328 aa3.87□□□□□ -1.79
PRE2YPR103W SWT21P53873 357 aaPredicted RBP3.87□□□□□ -1.79
PRE2YPR103W APJ1P53940 528 aa3.87□□□□□ -1.79
PRE2YPR103W YOS9Q99220 542 aa3.87□□□□□ -1.79
PRE2YPR103W IQG1Q12280 1495 aa3.86□□□□□ -1.79
PRE2YPR103W SNQ2P32568 1501 aaKnown RBP3.86□□□□□ -1.79
PRE2YPR103W PDR12Q02785 1511 aa3.86□□□□□ -1.79
PRE2YPR103W GDB1Q06625 1536 aa3.86□□□□□ -1.79
PRE2YPR103W YAK1P14680 807 aa3.86□□□□□ -1.79
PRE2YPR103W KRE6P32486 720 aa3.86□□□□□ -1.79
PRE2YPR103W CAT2P32796 670 aaKnown RBP3.86□□□□□ -1.79
PRE2YPR103W MED8P38304 223 aa3.86□□□□□ -1.79
PRE2YPR103W SMC2P38989 1170 aaKnown RBP3.86□□□□□ -1.79
PRE2YPR103W NBP1P52919 319 aaPredicted RBP3.86□□□□□ -1.79
PRE2YPR103W NNT1Q05874 261 aa3.86□□□□□ -1.79
PRE2YPR103W PER33Q12144 273 aa3.86□□□□□ -1.79
PRE2YPR103W BUD3P25558 1636 aa3.85□□□□□ -1.79
PRE2YPR103W DNF3Q12674 1656 aa3.85□□□□□ -1.79
PRE2YPR103W OSM1P21375 501 aaKnown RBP3.85□□□□□ -1.79
PRE2YPR103W PEX3P28795 441 aa3.85□□□□□ -1.79
PRE2YPR103W ECM14P38836 430 aa3.85□□□□□ -1.79
PRE2YPR103W TAD2P47058 250 aa3.85□□□□□ -1.79
PRE2YPR103W YNL095CP53932 642 aa3.85□□□□□ -1.79
PRE2YPR103W ATC1Q04005 294 aa3.85□□□□□ -1.79
PRE2YPR103W CTS2Q06350 511 aa3.85□□□□□ -1.79
PRE2YPR103W PRR2Q12310 699 aa3.85□□□□□ -1.79
PRE2YPR103W AI5_BETAQ9ZZX0 354 aa3.85□□□□□ -1.79
PRE2YPR103W YMR316C-AI2HB70 103 aa3.84□□□□□ -1.79
PRE2YPR103W MSF1P08425 469 aa3.84□□□□□ -1.79
PRE2YPR103W DDI1P40087 428 aa3.84□□□□□ -1.79
PRE2YPR103W CTR3Q06686 241 aa3.84□□□□□ -1.79
PRE2YPR103W YOL107WQ12239 342 aa3.84□□□□□ -1.79
PRE2YPR103W SME1Q12330 94 aaPredicted RBP3.84□□□□□ -1.79
PRE2YPR103W PDR15Q04182 1529 aaKnown RBP3.84□□□□□ -1.8
PRE2YPR103W HIS1P00498 297 aaKnown RBP3.83□□□□□ -1.8
PRE2YPR103W YOL163WP0CF20 169 aa3.83□□□□□ -1.8
PRE2YPR103W COS2P0CX12 379 aa3.83□□□□□ -1.8
PRE2YPR103W COS3P0CX13 379 aa3.83□□□□□ -1.8
PRE2YPR103W VPS1P21576 704 aaKnown RBP3.83□□□□□ -1.8
PRE2YPR103W ALK2P32789 676 aaPredicted RBP3.83□□□□□ -1.8
PRE2YPR103W HMT1P38074 348 aa3.83□□□□□ -1.8
PRE2YPR103W MAL13P53338 473 aa3.83□□□□□ -1.8
PRE2YPR103W ALG11P53954 548 aaKnown RBP3.83□□□□□ -1.8
PRE2YPR103W YPL039WQ03080 316 aa3.83□□□□□ -1.8
PRE2YPR103W TVP15Q03860 143 aa3.83□□□□□ -1.8
PRE2YPR103W YPR063CQ12160 140 aa3.83□□□□□ -1.8
PRE2YPR103W STH1P32597 1359 aa3.83□□□□□ -1.8
PRE2YPR103W CHC1P22137 1653 aaKnown RBP3.82□□□□□ -1.8
PRE2YPR103W ARO1P08566 1588 aaKnown RBP3.82□□□□□ -1.8
PRE2YPR103W RSR1P13856 272 aa3.82□□□□□ -1.8
PRE2YPR103W RRT12P25381 491 aa3.82□□□□□ -1.8
PRE2YPR103W CAM1P29547 415 aaKnown RBP3.82□□□□□ -1.8
PRE2YPR103W ERG2P32352 222 aa3.82□□□□□ -1.8
PRE2YPR103W TKL2P33315 681 aa3.82□□□□□ -1.8
PRE2YPR103W TRM7P38238 310 aaKnown RBP3.82□□□□□ -1.8
PRE2YPR103W PHO89P38361 574 aa3.82□□□□□ -1.8
PRE2YPR103W ECO1P43605 281 aa3.82□□□□□ -1.8
PRE2YPR103W RPL4AP10664 362 aaKnown RBP3.81□□□□□ -1.8
PRE2YPR103W CWP1P28319 239 aa3.81□□□□□ -1.8
PRE2YPR103W YHL049CP38722 271 aa3.81□□□□□ -1.8
PRE2YPR103W OST3P48439 350 aa3.81□□□□□ -1.8
PRE2YPR103W RPL4BP49626 362 aaKnown RBP3.81□□□□□ -1.8
PRE2YPR103W TIM21P53220 239 aa3.81□□□□□ -1.8
PRE2YPR103W YBL112CQ3E7Y4 105 aa3.81□□□□□ -1.8
PRE2YPR103W NUP157P40064 1391 aaKnown RBP3.8□□□□□ -1.8
PRE2YPR103W COY1P34237 679 aa3.8□□□□□ -1.8
PRE2YPR103W ARN2P38724 620 aa3.8□□□□□ -1.8
PRE2YPR103W BIG1P38813 335 aa3.8□□□□□ -1.8
PRE2YPR103W SHC1P39000 512 aa3.8□□□□□ -1.8
PRE2YPR103W YMR166CQ03829 368 aa3.8□□□□□ -1.8
PRE2YPR103W MLP2P40457 1679 aa3.79□□□□□ -1.8
PRE2YPR103W DAL82P21705 255 aa3.79□□□□□ -1.8
PRE2YPR103W PRS2P38620 318 aaKnown RBP3.79□□□□□ -1.8
PRE2YPR103W SUR2P38992 349 aa3.79□□□□□ -1.8
PRE2YPR103W SPO73P40031 143 aa3.79□□□□□ -1.8
PRE2YPR103W RPE1P46969 238 aa3.79□□□□□ -1.8
PRE2YPR103W YJR012CP47087 207 aa3.79□□□□□ -1.8
PRE2YPR103W ADH6Q04894 360 aaKnown RBP3.79□□□□□ -1.8
PRE2YPR103W SDO1Q07953 250 aaKnown RBP3.79□□□□□ -1.8
PRE2YPR103W BTS1Q12051 335 aa3.79□□□□□ -1.8
PRE2YPR103W RFM1Q12192 310 aa3.79□□□□□ -1.8
PRE2YPR103W EHD3P28817 500 aa3.78□□□□□ -1.8
PRE2YPR103W QRI5P32344 111 aa3.78□□□□□ -1.8
PRE2YPR103W CSG2P35206 410 aa3.78□□□□□ -1.8
PRE2YPR103W YAP3P38749 330 aa3.78□□□□□ -1.8
PRE2YPR103W YNL134CP53912 376 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms