RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeast

Gene SSO1, Length 873 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSO1	YPL232W	ANR2	P36090	516 aa	Predicted RBP	4.17	□□□□□ -1.74
SSO1	YPL232W	CHA4	P43634	648 aa		4.17	□□□□□ -1.74
SSO1	YPL232W	PIR5	P46999	287 aa		4.17	□□□□□ -1.74
SSO1	YPL232W	YJL016W	P47072	561 aa		4.17	□□□□□ -1.74
SSO1	YPL232W	NOP9	P47077	666 aa	Known RBP	4.17	□□□□□ -1.74
SSO1	YPL232W	CAC2	Q04199	468 aa		4.17	□□□□□ -1.74
SSO1	YPL232W	SPG4	Q04438	115 aa		4.17	□□□□□ -1.74
SSO1	YPL232W	RPC40	P07703	335 aa	Known RBP	4.16	□□□□□ -1.74
SSO1	YPL232W	MSS18	P08593	268 aa		4.16	□□□□□ -1.74
SSO1	YPL232W	RRP7	P25368	297 aa	Predicted RBP	4.16	□□□□□ -1.74
SSO1	YPL232W	YCL002C	P25565	263 aa		4.16	□□□□□ -1.74
SSO1	YPL232W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
SSO1	YPL232W	NTA1	P40354	457 aa		4.16	□□□□□ -1.74
SSO1	YPL232W	USE1	P53146	245 aa		4.16	□□□□□ -1.74
SSO1	YPL232W	YGR045C	P53229	120 aa		4.16	□□□□□ -1.74
SSO1	YPL232W	YNR048W	P53740	393 aa		4.16	□□□□□ -1.74
SSO1	YPL232W	SPR6	Q01684	191 aa		4.16	□□□□□ -1.74
SSO1	YPL232W	YPL067C	Q02754	198 aa		4.16	□□□□□ -1.74
SSO1	YPL232W	ABZ2	Q03266	374 aa		4.16	□□□□□ -1.74
SSO1	YPL232W	PEX12	Q04370	399 aa		4.16	□□□□□ -1.74
SSO1	YPL232W	RPL30	P14120	105 aa	Known RBP	4.15	□□□□□ -1.75
SSO1	YPL232W	ISC10	P32645	267 aa		4.15	□□□□□ -1.75
SSO1	YPL232W	VPS17	P32913	551 aa		4.15	□□□□□ -1.75
SSO1	YPL232W	CTF8	P38877	133 aa		4.15	□□□□□ -1.75
SSO1	YPL232W	HIS6	P40545	261 aa		4.15	□□□□□ -1.75
SSO1	YPL232W	YFL054C	P43549	646 aa		4.15	□□□□□ -1.75
SSO1	YPL232W	SLD3	P53135	668 aa		4.15	□□□□□ -1.75
SSO1	YPL232W	SAM50	P53969	484 aa		4.15	□□□□□ -1.75
SSO1	YPL232W	MRX8	Q05473	314 aa		4.15	□□□□□ -1.75
SSO1	YPL232W	SWA2	Q06677	668 aa		4.15	□□□□□ -1.75
SSO1	YPL232W	YOL029C	Q08187	201 aa		4.15	□□□□□ -1.75
SSO1	YPL232W	YOR289W	Q12012	251 aa	Predicted RBP	4.15	□□□□□ -1.75
SSO1	YPL232W	ISA2	Q12425	185 aa		4.15	□□□□□ -1.75
SSO1	YPL232W	MRPL23	Q12487	163 aa	Predicted RBP	4.15	□□□□□ -1.75
SSO1	YPL232W	ATP10	P18496	279 aa		4.14	□□□□□ -1.75
SSO1	YPL232W	VMA3	P25515	160 aa		4.14	□□□□□ -1.75
SSO1	YPL232W	MLF3	P32047	452 aa		4.14	□□□□□ -1.75
SSO1	YPL232W	SKG1	P36169	355 aa		4.14	□□□□□ -1.75
SSO1	YPL232W	FRM2	P37261	193 aa		4.14	□□□□□ -1.75
SSO1	YPL232W	ADH5	P38113	351 aa	Known RBP	4.14	□□□□□ -1.75
SSO1	YPL232W	FZO1	P38297	855 aa		4.14	□□□□□ -1.75
SSO1	YPL232W	RPS20	P38701	121 aa	Known RBP	4.14	□□□□□ -1.75
SSO1	YPL232W	CHL4	P38907	458 aa		4.14	□□□□□ -1.75
SSO1	YPL232W	QRI7	P43122	407 aa		4.14	□□□□□ -1.75
SSO1	YPL232W	RET2	P43621	546 aa		4.14	□□□□□ -1.75
SSO1	YPL232W	GPI1	P53306	609 aa		4.14	□□□□□ -1.75
SSO1	YPL232W	PXR1	P53335	271 aa	Predicted RBP	4.14	□□□□□ -1.75
SSO1	YPL232W	YMR254C	Q04838	102 aa		4.14	□□□□□ -1.75
SSO1	YPL232W	ELP6	Q04868	273 aa		4.14	□□□□□ -1.75
SSO1	YPL232W	SNX3	Q08826	162 aa	Known RBP	4.14	□□□□□ -1.75
SSO1	YPL232W	TGS1	Q12052	315 aa		4.14	□□□□□ -1.75
SSO1	YPL232W	GDH1	P07262	454 aa	Known RBP	4.13	□□□□□ -1.75
SSO1	YPL232W	YHR212W-A	P0CX91	67 aa		4.13	□□□□□ -1.75
SSO1	YPL232W	FUN19	P28003	413 aa	Predicted RBP	4.13	□□□□□ -1.75
SSO1	YPL232W	NTG1	P31378	399 aa		4.13	□□□□□ -1.75
SSO1	YPL232W	YBR144C	P34215	104 aa		4.13	□□□□□ -1.75
SSO1	YPL232W	IPT1	P38954	527 aa		4.13	□□□□□ -1.75
SSO1	YPL232W	SPO73	P40031	143 aa		4.13	□□□□□ -1.75
SSO1	YPL232W	YER079W	P40052	210 aa	Known RBP	4.13	□□□□□ -1.75
SSO1	YPL232W	SFH5	P47008	294 aa		4.13	□□□□□ -1.75
SSO1	YPL232W	HMS2	P47175	358 aa		4.13	□□□□□ -1.75
SSO1	YPL232W	ECM18	Q04623	453 aa		4.13	□□□□□ -1.75
SSO1	YPL232W	YLR281C	Q05863	155 aa		4.13	□□□□□ -1.75
SSO1	YPL232W	MLC2	Q06580	163 aa		4.13	□□□□□ -1.75
SSO1	YPL232W	GRC3	Q07845	632 aa		4.13	□□□□□ -1.75
SSO1	YPL232W	ENA1	P13587	1091 aa		4.12	□□□□□ -1.75
SSO1	YPL232W	SAM35	P14693	329 aa		4.12	□□□□□ -1.75
SSO1	YPL232W	BGL2	P15703	313 aa	Known RBP	4.12	□□□□□ -1.75
SSO1	YPL232W	PHO85	P17157	305 aa		4.12	□□□□□ -1.75
SSO1	YPL232W	PHO80	P20052	293 aa		4.12	□□□□□ -1.75
SSO1	YPL232W	CLB4	P24871	460 aa		4.12	□□□□□ -1.75
SSO1	YPL232W	INO2	P26798	304 aa		4.12	□□□□□ -1.75
SSO1	YPL232W	TMA19	P35691	167 aa	Known RBP	4.12	□□□□□ -1.75
SSO1	YPL232W	YPK3	P38070	525 aa		4.12	□□□□□ -1.75
SSO1	YPL232W	SIC1	P38634	284 aa		4.12	□□□□□ -1.75
SSO1	YPL232W	TRM5	P38793	499 aa		4.12	□□□□□ -1.75
SSO1	YPL232W	TIR3	P40552	269 aa		4.12	□□□□□ -1.75
SSO1	YPL232W	PMT5	P52867	743 aa		4.12	□□□□□ -1.75
SSO1	YPL232W	DSL1	P53847	754 aa		4.12	□□□□□ -1.75
SSO1	YPL232W	PGA1	P53896	198 aa		4.12	□□□□□ -1.75
SSO1	YPL232W	YNL095C	P53932	642 aa		4.12	□□□□□ -1.75
SSO1	YPL232W	ENA2	Q01896	1091 aa		4.12	□□□□□ -1.75
SSO1	YPL232W	YKR005C	Q02203	525 aa		4.12	□□□□□ -1.75
SSO1	YPL232W	FRE3	Q08905	711 aa		4.12	□□□□□ -1.75
SSO1	YPL232W	ENA5	Q12691	1091 aa		4.12	□□□□□ -1.75
SSO1	YPL232W	YKL068W-A	Q3E826	78 aa		4.12	□□□□□ -1.75
SSO1	YPL232W	RIB3	Q99258	208 aa		4.12	□□□□□ -1.75
SSO1	YPL232W	PTP2	P29461	750 aa		4.11	□□□□□ -1.75
SSO1	YPL232W	CBT1	P36038	271 aa	Predicted RBP	4.11	□□□□□ -1.75
SSO1	YPL232W	SWD2	P36104	329 aa	Predicted RBP	4.11	□□□□□ -1.75
SSO1	YPL232W	ECM31	P38122	312 aa		4.11	□□□□□ -1.75
SSO1	YPL232W	TRS85	P46944	698 aa		4.11	□□□□□ -1.75
SSO1	YPL232W	RSM27	P53305	110 aa		4.11	□□□□□ -1.75
SSO1	YPL232W	AAH1	P53909	347 aa		4.11	□□□□□ -1.75
SSO1	YPL232W	STD1	Q02794	444 aa		4.11	□□□□□ -1.75
SSO1	YPL232W	OST6	Q03723	332 aa		4.11	□□□□□ -1.75
SSO1	YPL232W	SCW10	Q04951	389 aa		4.11	□□□□□ -1.75
SSO1	YPL232W	ATG26	Q06321	1198 aa		4.11	□□□□□ -1.75
SSO1	YPL232W	ASA1	Q06822	443 aa		4.11	□□□□□ -1.75
SSO1	YPL232W	AIM6	Q07716	390 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 16 ms