RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W YBR121C-AP0C5L4 52 aa1.94□□□□□ -2.1
VPS16YPL045W MATALPHA2P0CY08 210 aa1.94□□□□□ -2.1
VPS16YPL045W HMLALPHA2P0CY09 210 aa1.94□□□□□ -2.1
VPS16YPL045W POX1P13711 748 aa1.94□□□□□ -2.1
VPS16YPL045W IFM1P25038 676 aa1.94□□□□□ -2.1
VPS16YPL045W GIT1P25346 518 aa1.94□□□□□ -2.1
VPS16YPL045W YCR102CP25608 368 aa1.94□□□□□ -2.1
VPS16YPL045W AEP1P32493 518 aa1.94□□□□□ -2.1
VPS16YPL045W TAF14P35189 244 aa1.94□□□□□ -2.1
VPS16YPL045W BMT2P38278 337 aa1.94□□□□□ -2.1
VPS16YPL045W SHC1P39000 512 aa1.94□□□□□ -2.1
VPS16YPL045W YNL194CP40169 301 aa1.94□□□□□ -2.1
VPS16YPL045W YNR066CP53752 436 aa1.94□□□□□ -2.1
VPS16YPL045W SWS2P53937 143 aa1.94□□□□□ -2.1
VPS16YPL045W PRP38Q00723 242 aaPredicted RBP1.94□□□□□ -2.1
VPS16YPL045W TPS1Q00764 495 aaKnown RBP1.94□□□□□ -2.1
VPS16YPL045W ELP3Q02908 557 aaKnown RBP1.94□□□□□ -2.1
VPS16YPL045W PBA1Q05778 276 aa1.94□□□□□ -2.1
VPS16YPL045W CDC123Q05791 360 aa1.94□□□□□ -2.1
VPS16YPL045W YRA1Q12159 226 aaKnown RBP1.94□□□□□ -2.1
VPS16YPL045W YCT1Q12235 531 aa1.94□□□□□ -2.1
VPS16YPL045W TFC7Q12415 435 aa1.94□□□□□ -2.1
VPS16YPL045W IZH2Q12442 317 aa1.94□□□□□ -2.1
VPS16YPL045W NAG1Q8TGN9 163 aa1.94□□□□□ -2.1
VPS16YPL045W PEX3P28795 441 aa1.93□□□□□ -2.1
VPS16YPL045W EHD3P28817 500 aa1.93□□□□□ -2.1
VPS16YPL045W GPX1P36014 167 aa1.93□□□□□ -2.1
VPS16YPL045W JEN1P36035 616 aa1.93□□□□□ -2.1
VPS16YPL045W ECM4P36156 370 aa1.93□□□□□ -2.1
VPS16YPL045W YBR096WP38256 230 aa1.93□□□□□ -2.1
VPS16YPL045W PTH1P38876 190 aaKnown RBP1.93□□□□□ -2.1
VPS16YPL045W PAN6P40459 309 aa1.93□□□□□ -2.1
VPS16YPL045W YJR054WP47114 497 aa1.93□□□□□ -2.1
VPS16YPL045W BIR1P47134 954 aa1.93□□□□□ -2.1
VPS16YPL045W CWC23P52868 283 aaPredicted RBP1.93□□□□□ -2.1
VPS16YPL045W USE1P53146 245 aa1.93□□□□□ -2.1
VPS16YPL045W HOP2P53187 214 aa1.93□□□□□ -2.1
VPS16YPL045W ASI3P53983 676 aa1.93□□□□□ -2.1
VPS16YPL045W CTF19Q02732 369 aa1.93□□□□□ -2.1
VPS16YPL045W ADD37Q03233 198 aa1.93□□□□□ -2.1
VPS16YPL045W TAF9Q05027 157 aa1.93□□□□□ -2.1
VPS16YPL045W SEC10Q06245 871 aa1.93□□□□□ -2.1
VPS16YPL045W RPN8Q08723 338 aaKnown RBP1.93□□□□□ -2.1
VPS16YPL045W YOR292CQ08743 309 aa1.93□□□□□ -2.1
VPS16YPL045W YOR376WQ08900 122 aa1.93□□□□□ -2.1
VPS16YPL045W FDH1Q08911 376 aa1.93□□□□□ -2.1
VPS16YPL045W YPL245WQ12179 454 aaKnown RBP1.93□□□□□ -2.1
VPS16YPL045W FOL3Q12676 427 aaPredicted RBP1.93□□□□□ -2.1
VPS16YPL045W PMD1P32634 1753 aa1.93□□□□□ -2.1
VPS16YPL045W YDR157WA0A023PZE8 133 aa1.93□□□□□ -2.1
VPS16YPL045W YAL064W-BO13512 126 aa1.93□□□□□ -2.1
VPS16YPL045W CBF1P17106 351 aa1.93□□□□□ -2.1
VPS16YPL045W YER186CP40101 306 aa1.93□□□□□ -2.1
VPS16YPL045W CRZ1P53968 678 aa1.93□□□□□ -2.1
VPS16YPL045W SKI8Q02793 397 aaPredicted RBP1.93□□□□□ -2.1
VPS16YPL045W YLR177WQ06251 628 aa1.93□□□□□ -2.1
VPS16YPL045W PPT2Q12036 173 aa1.93□□□□□ -2.1
VPS16YPL045W FAS2P19097 1887 aaKnown RBP1.92□□□□□ -2.1
VPS16YPL045W STE7P06784 515 aa1.92□□□□□ -2.1
VPS16YPL045W CMK2P22517 447 aa1.92□□□□□ -2.1
VPS16YPL045W NAM9P27929 486 aa1.92□□□□□ -2.1
VPS16YPL045W YBL059WP34224 193 aa1.92□□□□□ -2.1
VPS16YPL045W MRPL10P36520 322 aa1.92□□□□□ -2.1
VPS16YPL045W MBA1P38300 278 aa1.92□□□□□ -2.1
VPS16YPL045W REE1P40893 198 aa1.92□□□□□ -2.1
VPS16YPL045W VPS60Q03390 229 aa1.92□□□□□ -2.1
VPS16YPL045W YML018CQ03730 393 aa1.92□□□□□ -2.1
VPS16YPL045W YMR166CQ03829 368 aa1.92□□□□□ -2.1
VPS16YPL045W TIP41Q12199 356 aa1.92□□□□□ -2.1
VPS16YPL045W YPL119C-AQ3E751 87 aa1.92□□□□□ -2.1
VPS16YPL045W YCL012CQ8J0M4 134 aa1.92□□□□□ -2.1
VPS16YPL045W AI5_BETAQ9ZZX0 354 aa1.92□□□□□ -2.1
VPS16YPL045W TPI1P00942 248 aaKnown RBP1.92□□□□□ -2.1
VPS16YPL045W ADE1P27616 306 aa1.92□□□□□ -2.1
VPS16YPL045W TPS2P31688 896 aaKnown RBP1.92□□□□□ -2.1
VPS16YPL045W SLX1P38324 304 aa1.92□□□□□ -2.1
VPS16YPL045W CUE1P38428 203 aa1.92□□□□□ -2.1
VPS16YPL045W COX15P40086 486 aa1.92□□□□□ -2.1
VPS16YPL045W SDS23P53172 527 aa1.92□□□□□ -2.1
VPS16YPL045W YGR015CP53208 328 aa1.92□□□□□ -2.1
VPS16YPL045W NRM1P53718 249 aa1.92□□□□□ -2.1
VPS16YPL045W YDR222WQ04925 415 aa1.92□□□□□ -2.1
VPS16YPL045W HRI1Q05905 244 aaKnown RBP1.92□□□□□ -2.1
VPS16YPL045W PLB3Q08108 686 aa1.92□□□□□ -2.1
VPS16YPL045W RRS1Q08746 203 aaKnown RBP1.92□□□□□ -2.1
VPS16YPL045W YBR298C-AQ8TGK4 73 aa1.92□□□□□ -2.1
VPS16YPL045W RPL27AP0C2H6 136 aaKnown RBP1.91□□□□□ -2.1
VPS16YPL045W RPL27BP0C2H7 136 aaKnown RBP1.91□□□□□ -2.1
VPS16YPL045W RPL4AP10664 362 aaKnown RBP1.91□□□□□ -2.1
VPS16YPL045W SPT15P13393 240 aaKnown RBP1.91□□□□□ -2.1
VPS16YPL045W CDC50P25656 391 aa1.91□□□□□ -2.1
VPS16YPL045W ALK2P32789 676 aaPredicted RBP1.91□□□□□ -2.1
VPS16YPL045W CDC13P32797 924 aaKnown RBP1.91□□□□□ -2.1
VPS16YPL045W NTF2P33331 125 aaKnown RBP1.91□□□□□ -2.1
VPS16YPL045W SHE1P38200 338 aa1.91□□□□□ -2.1
VPS16YPL045W RFS1P38234 210 aaKnown RBP1.91□□□□□ -2.1
VPS16YPL045W BAT1P38891 393 aaKnown RBP1.91□□□□□ -2.1
VPS16YPL045W KRE9P39005 276 aa1.91□□□□□ -2.1
VPS16YPL045W OXA1P39952 402 aa1.91□□□□□ -2.1
VPS16YPL045W RPL4BP49626 362 aaKnown RBP1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms