RNA–Protein interactions for RNA: YOR329C

SCD5, Transcript of Protein required for normal actin organization and endocytosis, yeastyeast

Gene SCD5, Length 2,619 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCD5YOR329C RPL6AQ02326 176 aaKnown RBP2.08□□□□□ -2.08
SCD5YOR329C PLB2Q03674 706 aa2.08□□□□□ -2.08
SCD5YOR329C INP1Q03694 420 aa2.08□□□□□ -2.08
SCD5YOR329C NUP53Q03790 475 aa2.08□□□□□ -2.08
SCD5YOR329C SPR28Q04921 423 aa2.08□□□□□ -2.08
SCD5YOR329C YRA1Q12159 226 aaKnown RBP2.08□□□□□ -2.08
SCD5YOR329C ORT1Q12375 292 aa2.08□□□□□ -2.08
SCD5YOR329C GAL1P04385 528 aa2.07□□□□□ -2.08
SCD5YOR329C RPL7AP05737 244 aaKnown RBP2.07□□□□□ -2.08
SCD5YOR329C MET3P08536 511 aa2.07□□□□□ -2.08
SCD5YOR329C MCM1P11746 286 aa2.07□□□□□ -2.08
SCD5YOR329C NFS1P25374 497 aa2.07□□□□□ -2.08
SCD5YOR329C CNE1P27825 502 aa2.07□□□□□ -2.08
SCD5YOR329C ECM25P32525 599 aa2.07□□□□□ -2.08
SCD5YOR329C RPC34P32910 317 aa2.07□□□□□ -2.08
SCD5YOR329C MRT4P33201 236 aaKnown RBP2.07□□□□□ -2.08
SCD5YOR329C PPZ2P33329 710 aa2.07□□□□□ -2.08
SCD5YOR329C MRPL27P36526 146 aaPredicted RBP2.07□□□□□ -2.08
SCD5YOR329C SSH1P38353 490 aaKnown RBP2.07□□□□□ -2.08
SCD5YOR329C RTC3P38804 111 aaPredicted RBP2.07□□□□□ -2.08
SCD5YOR329C ECO1P43605 281 aa2.07□□□□□ -2.08
SCD5YOR329C CIN2P46670 268 aa2.07□□□□□ -2.08
SCD5YOR329C UBX6P47049 396 aa2.07□□□□□ -2.08
SCD5YOR329C PHB2P50085 310 aa2.07□□□□□ -2.08
SCD5YOR329C RPN14P53196 417 aa2.07□□□□□ -2.08
SCD5YOR329C VHT1P53241 593 aa2.07□□□□□ -2.08
SCD5YOR329C SRP1Q02821 542 aaKnown RBP2.07□□□□□ -2.08
SCD5YOR329C YDR209CQ03480 137 aa2.07□□□□□ -2.08
SCD5YOR329C VBA1Q04301 562 aa2.07□□□□□ -2.08
SCD5YOR329C HLR1Q04429 423 aa2.07□□□□□ -2.08
SCD5YOR329C COQ11Q05892 277 aa2.07□□□□□ -2.08
SCD5YOR329C SEI1Q06058 285 aa2.07□□□□□ -2.08
SCD5YOR329C YNG1Q08465 219 aa2.07□□□□□ -2.08
SCD5YOR329C FEX1Q08913 375 aa2.07□□□□□ -2.08
SCD5YOR329C RPL7BQ12213 244 aaKnown RBP2.07□□□□□ -2.08
SCD5YOR329C MCT1Q12283 360 aa2.07□□□□□ -2.08
SCD5YOR329C TDH2P00358 332 aaKnown RBP2.07□□□□□ -2.08
SCD5YOR329C FUR4P05316 633 aaKnown RBP2.07□□□□□ -2.08
SCD5YOR329C RPS13P05756 151 aaKnown RBP2.07□□□□□ -2.08
SCD5YOR329C HXT2P23585 541 aa2.07□□□□□ -2.08
SCD5YOR329C MRP17P28778 131 aa2.07□□□□□ -2.08
SCD5YOR329C ERG9P29704 444 aa2.07□□□□□ -2.08
SCD5YOR329C DEG1P31115 442 aaKnown RBP2.07□□□□□ -2.08
SCD5YOR329C ERG24P32462 438 aaKnown RBP2.07□□□□□ -2.08
SCD5YOR329C HSP150P32478 413 aa2.07□□□□□ -2.08
SCD5YOR329C SUA5P32579 426 aa2.07□□□□□ -2.08
SCD5YOR329C ISC10P32645 267 aa2.07□□□□□ -2.08
SCD5YOR329C NAT2P37293 288 aa2.07□□□□□ -2.08
SCD5YOR329C AIM3P38266 947 aaKnown RBP2.07□□□□□ -2.08
SCD5YOR329C ARC40P38328 384 aaKnown RBP2.07□□□□□ -2.08
SCD5YOR329C YMR262WP38430 313 aa2.07□□□□□ -2.08
SCD5YOR329C COS8P38723 381 aa2.07□□□□□ -2.08
SCD5YOR329C PET100P38958 111 aa2.07□□□□□ -2.08
SCD5YOR329C SHO1P40073 367 aa2.07□□□□□ -2.08
SCD5YOR329C CCS1P40202 249 aaKnown RBP2.07□□□□□ -2.08
SCD5YOR329C QDR1P40475 563 aa2.07□□□□□ -2.08
SCD5YOR329C GPI14P47088 403 aaKnown RBP2.07□□□□□ -2.08
SCD5YOR329C MSY1P48527 492 aa2.07□□□□□ -2.08
SCD5YOR329C PBP1P53297 722 aaKnown RBP2.07□□□□□ -2.08
SCD5YOR329C RSM27P53305 110 aa2.07□□□□□ -2.08
SCD5YOR329C ALG12P53730 551 aa2.07□□□□□ -2.08
SCD5YOR329C SUR7P54003 302 aa2.07□□□□□ -2.08
SCD5YOR329C TRS23Q03784 219 aa2.07□□□□□ -2.08
SCD5YOR329C TY1A-MR1Q04215 440 aa2.07□□□□□ -2.08
SCD5YOR329C ECM18Q04623 453 aa2.07□□□□□ -2.08
SCD5YOR329C MET32Q12041 191 aa2.07□□□□□ -2.08
SCD5YOR329C VAM3Q12241 283 aa2.07□□□□□ -2.08
SCD5YOR329C TY1A-BLQ12266 440 aa2.07□□□□□ -2.08
SCD5YOR329C YDL180WQ12301 547 aa2.07□□□□□ -2.08
SCD5YOR329C FRE7Q12333 620 aa2.07□□□□□ -2.08
SCD5YOR329C SWM1Q12379 170 aa2.07□□□□□ -2.08
SCD5YOR329C ISA2Q12425 185 aa2.07□□□□□ -2.08
SCD5YOR329C IZH2Q12442 317 aa2.07□□□□□ -2.08
SCD5YOR329C YHR214C-EQ8TGK0 99 aa2.07□□□□□ -2.08
SCD5YOR329C BRR2P32639 2163 aaKnown RBP2.07□□□□□ -2.08
SCD5YOR329C RPS31P05759 152 aaKnown RBP2.06□□□□□ -2.08
SCD5YOR329C PHO2P07269 559 aa2.06□□□□□ -2.08
SCD5YOR329C SGA1P08019 549 aa2.06□□□□□ -2.08
SCD5YOR329C RPS18AP0CX55 146 aaKnown RBP2.06□□□□□ -2.08
SCD5YOR329C RPS18BP0CX56 146 aaPredicted RBP2.06□□□□□ -2.08
SCD5YOR329C RPL30P14120 105 aaKnown RBP2.06□□□□□ -2.08
SCD5YOR329C RPB8P20436 146 aa2.06□□□□□ -2.08
SCD5YOR329C PET18P25362 215 aa2.06□□□□□ -2.08
SCD5YOR329C YCR016WP25617 290 aaKnown RBP2.06□□□□□ -2.08
SCD5YOR329C UTP30P36144 274 aaKnown RBP2.06□□□□□ -2.08
SCD5YOR329C MRPL36P36531 177 aa2.06□□□□□ -2.08
SCD5YOR329C GRE3P38715 327 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
SCD5YOR329C ARO9P38840 513 aaPredicted RBP2.06□□□□□ -2.08
SCD5YOR329C PTH1P38876 190 aaKnown RBP2.06□□□□□ -2.08
SCD5YOR329C LNP1P38878 278 aa2.06□□□□□ -2.08
SCD5YOR329C MIT1P40002 666 aa2.06□□□□□ -2.08
SCD5YOR329C XBP1P40489 647 aa2.06□□□□□ -2.08
SCD5YOR329C SNO3P43544 222 aa2.06□□□□□ -2.08
SCD5YOR329C MOB2P43563 287 aa2.06□□□□□ -2.08
SCD5YOR329C IKS1P47042 667 aa2.06□□□□□ -2.08
SCD5YOR329C UBC12P52491 188 aa2.06□□□□□ -2.08
SCD5YOR329C ORM1P53224 222 aa2.06□□□□□ -2.08
SCD5YOR329C MRPL13Q02204 264 aa2.06□□□□□ -2.08
SCD5YOR329C YPL067CQ02754 198 aa2.06□□□□□ -2.08
SCD5YOR329C ATG21Q02887 496 aa2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 241.2 ms